RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SDR42E1Q8WUS8 393 aa13.23□□□□□ -0.29
SPG11-216ENST00000559347 PARK7Q99497 189 aaKnown RBP13.23□□□□□ -0.29
SPG11-216ENST00000559347 SERPINB13Q9UIV8 391 aa13.23□□□□□ -0.29
SPG11-216ENST00000559347 ZBTB21Q9ULJ3 1066 aa13.23□□□□□ -0.29
SPG11-216ENST00000559347 USP17L5A8MUK1 530 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 ZSCAN25Q6NSZ9 544 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 TATDN1Q6P1N9 297 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 C17orf99Q6UX52 265 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 TTC6Q86TZ1 520 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 KBTBD3Q8NAB2 608 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 PROCA1Q8NCQ7 364 aaPredicted RBP13.22□□□□□ -0.29
SPG11-216ENST00000559347 ZNF280CQ8ND82 737 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 PI4K2BQ8TCG2 481 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 AS3MTQ9HBK9 375 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 DCP1AQ9NPI6 582 aaPredicted RBP13.22□□□□□ -0.29
SPG11-216ENST00000559347 AGTPBP1Q9UPW5 1226 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 SLC45A1Q9Y2W3 748 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 PARP14Q460N5 1801 aa13.22□□□□□ -0.29
SPG11-216ENST00000559347 CYP2C8P10632 490 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 MX1P20591 662 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 PLCD1P51178 756 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 LACTBP83111 547 aaPredicted RBP13.21□□□□□ -0.29
SPG11-216ENST00000559347 EVX2Q03828 476 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 SPP2Q13103 211 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 TREML2Q5T2D2 321 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 GCC1Q96CN9 775 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 ARHGAP39Q9C0H5 1083 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 PUS7LQ9H0K6 701 aaKnown RBP13.21□□□□□ -0.29
SPG11-216ENST00000559347 EFCC1Q9HA90 598 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 GINM1Q9NU53 330 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 CPA4Q9UI42 421 aa13.21□□□□□ -0.29
SPG11-216ENST00000559347 A0A0G2JMZ2 1700 aa13.21□□□□□ -0.3
SPG11-216ENST00000559347 PRKAB2O43741 272 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 POLR3DP05423 398 aaPredicted RBP13.2□□□□□ -0.3
SPG11-216ENST00000559347 BCRP11274 1271 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 SHMT1P34896 483 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 HMGCS2P54868 508 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 GABPAQ06546 454 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 MTMR2Q13614 643 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 EXOC6Q8TAG9 804 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 WDR18Q9BV38 432 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 MCM9Q9NXL9 1143 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
SPG11-216ENST00000559347 PLXNB2O15031 1838 aa13.19□□□□□ -0.3
SPG11-216ENST00000559347 ERC2O15083 957 aa13.19□□□□□ -0.3
SPG11-216ENST00000559347 GLRX3O76003 335 aaKnown RBP13.19□□□□□ -0.3
SPG11-216ENST00000559347 GH2P01242 217 aa13.19□□□□□ -0.3
SPG11-216ENST00000559347 CYP2D6P10635 497 aa13.19□□□□□ -0.3
SPG11-216ENST00000559347 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
SPG11-216ENST00000559347 MKI67P46013 3256 aaKnown RBP13.19□□□□□ -0.3
SPG11-216ENST00000559347 MYH4Q9Y623 1939 aa13.18□□□□□ -0.3
SPG11-216ENST00000559347 CTGFP29279 349 aa13.18□□□□□ -0.3
SPG11-216ENST00000559347 BACE1P56817 501 aa13.18□□□□□ -0.3
SPG11-216ENST00000559347 KIF22Q14807 665 aa13.18□□□□□ -0.3
SPG11-216ENST00000559347 CERKLQ49MI3 558 aaPredicted RBP13.18□□□□□ -0.3
SPG11-216ENST00000559347 ANKRD45Q5TZF3 282 aa13.18□□□□□ -0.3
SPG11-216ENST00000559347 SMC5Q8IY18 1101 aa13.18□□□□□ -0.3
SPG11-216ENST00000559347 APPBP2Q92624 585 aa13.18□□□□□ -0.3
SPG11-216ENST00000559347 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
SPG11-216ENST00000559347 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
SPG11-216ENST00000559347 DOCK3Q8IZD9 2030 aa13.18□□□□□ -0.3
SPG11-216ENST00000559347 RLFQ13129 1914 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 USP17L10C9JJH3 530 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 ZFYP08048 801 aaPredicted RBP13.17□□□□□ -0.3
SPG11-216ENST00000559347 SOX10P56693 466 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 ARHGEF6Q15052 776 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 ABCB5Q2M3G0 1257 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 SMCR8Q8TEV9 937 aaPredicted RBP13.17□□□□□ -0.3
SPG11-216ENST00000559347 OSBP2Q969R2 916 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
SPG11-216ENST00000559347 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 PTCH2Q9Y6C5 1203 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 SLC4A4Q9Y6R1 1079 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 ROBO3Q96MS0 1386 aa13.17□□□□□ -0.3
SPG11-216ENST00000559347 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 CYP2D7A0A087X1C5 515 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 C19orf81C9J6K1 198 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 SMIM22K7EJ46 135 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 M0R2C6 588 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 RNF113AO15541 343 aaKnown RBP13.16□□□□□ -0.3
SPG11-216ENST00000559347 GNRH1P01148 92 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 DSG3P32926 999 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 RGS19P49795 217 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 PABPC4Q13310 644 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPG11-216ENST00000559347 DYNLL2Q96FJ2 89 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 TRIM47Q96LD4 638 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 STRBPQ96SI9 672 aaKnown RBP13.16□□□□□ -0.3
SPG11-216ENST00000559347 FSD1Q9BTV5 496 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 TMOD4Q9NZQ9 345 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 ARPP21Q9UBL0 812 aaPredicted RBP13.16□□□□□ -0.3
SPG11-216ENST00000559347 STAP2Q9UGK3 403 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
SPG11-216ENST00000559347 USP17L12C9JPN9 530 aa13.15□□□□□ -0.3
SPG11-216ENST00000559347 USP17L21D6R901 530 aa13.15□□□□□ -0.3
SPG11-216ENST00000559347 GPAA1O43292 621 aa13.15□□□□□ -0.3
SPG11-216ENST00000559347 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
SPG11-216ENST00000559347 GUCY1A2P33402 732 aa13.15□□□□□ -0.3
SPG11-216ENST00000559347 PSMC4P43686 418 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms