RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 ANAPC15P60006 121 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 MAP3K9P80192 1104 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 MAP3K10Q02779 954 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 ABCB5Q2M3G0 1257 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 TATDN1Q6P1N9 297 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 STOX1Q6ZVD7 989 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 RASEFQ8IZ41 740 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 KCNB2Q92953 911 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 KLRG1Q96E93 195 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 JAKMIP1Q96N16 626 aaKnown RBP7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 NEK1Q96PY6 1258 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 PICK1Q9NRD5 415 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 CSADQ9Y600 493 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 TAF6LQ9Y6J9 622 aa7.79□□□□□ -1.16
CHRNA3-204ENST00000559002 LAMA4Q16363 1823 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 UBE2Q2LH0YL09 131 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 GH2P01242 217 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 ASNSP08243 561 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 HMGB1P09429 215 aaKnown RBP7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 AKR1B1P15121 316 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 CASTP20810 708 aaKnown RBP7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 MCM5P33992 734 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 CAP2P40123 477 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 HUNKP57058 714 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 TFAP4Q01664 338 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 SART3Q15020 963 aaKnown RBP7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 RAB3GAP1Q15042 981 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 MAP3K11Q16584 847 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 TSGA10IPQ3SY00 556 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 CCDC178Q5BJE1 867 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 FAM47AQ5JRC9 791 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 PPP4R3BQ5MIZ7 849 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 BLOC1S2Q6QNY1 142 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 TMEM179Q6ZVK1 233 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 MOB2Q70IA6 237 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 IQCA1Q86XH1 822 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 ANKRD13AQ8IZ07 590 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 SCYL3Q8IZE3 742 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 ZKSCAN4Q969J2 545 aaPredicted RBP7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 TBC1D32Q96NH3 1257 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 UBAC1Q9BSL1 405 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 INCENPQ9NQS7 918 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 GINM1Q9NU53 330 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 ZNF112Q9UJU3 913 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 ZBTB21Q9ULJ3 1066 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 TACC3Q9Y6A5 838 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 SIPA1L1O43166 1804 aa7.78□□□□□ -1.16
CHRNA3-204ENST00000559002 PAPPA2Q9BXP8 1791 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 PLIN4Q96Q06 1357 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 ERICH2A1L162 156 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 UNCXA6NJT0 531 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 TMEM88BA6NKF7 163 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 PHF20L1A8MW92 1017 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 PRC1O43663 620 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 RBM25P49756 843 aaKnown RBP7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 FGD1P98174 961 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 ATP2B2Q01814 1243 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 ICA1Q05084 483 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 VGLL4Q14135 290 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 RRP1BQ14684 758 aaKnown RBP7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 ADCK5Q3MIX3 580 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 NOL9Q5SY16 702 aaKnown RBP7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 MB21D2Q8IYB1 491 aaPredicted RBP7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 NEDD1Q8NHV4 660 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 TM6SF1Q9BZW5 370 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 ELP3Q9H9T3 547 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 ABT1Q9ULW3 272 aaKnown RBP7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 CYP46A1Q9Y6A2 500 aa7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 POLR2AP24928 1970 aaKnown RBP7.77□□□□□ -1.17
CHRNA3-204ENST00000559002 USP17L5A8MUK1 530 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 IFIT3O14879 490 aaKnown RBP7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 RPS6KB1P23443 525 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 APLP1P51693 650 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 COL9A3Q14050 684 aaPredicted RBP7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 SEPT2Q15019 361 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 SHROOM1Q2M3G4 852 aaPredicted RBP7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 LDLRAD1Q5T700 205 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 CST9Q5W186 159 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 PAXIP1Q6ZW49 1069 aaPredicted RBP7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 CYB5R4Q7L1T6 521 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 DHX32Q7L7V1 743 aaKnown RBP7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 NKX2-3Q8TAU0 364 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 SLC10A4Q96EP9 437 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 CLMNQ96JQ2 1002 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 TMEM87BQ96K49 555 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 ZSCAN10Q96SZ4 725 aaPredicted RBP7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 FEZ1Q99689 392 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 ZKSCAN3Q9BRR0 538 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 UPF3BQ9BZI7 483 aaKnown RBP7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 SH2D4AQ9H788 454 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 KANSL2Q9H9L4 492 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 AS3MTQ9HBK9 375 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 ARHGEF10LQ9HCE6 1279 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 ZSWIM5Q9P217 1185 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 STX8Q9UNK0 236 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 SNCAIPQ9Y6H5 919 aa7.76□□□□□ -1.17
CHRNA3-204ENST00000559002 TNKSO95271 1327 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms