RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 HSPD1P10809 573 aaKnown RBP9.03□□□□□ -0.96
LRRC28-211ENST00000558890 XRCC6P12956 609 aaKnown RBP eCLIP9.03□□□□□ -0.96
LRRC28-211ENST00000558890 CASTP20810 708 aaKnown RBP9.03□□□□□ -0.96
LRRC28-211ENST00000558890 GJA5P36382 358 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 AK2P54819 239 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 PKP1Q13835 747 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 TSGA10IPQ3SY00 556 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 VPS53Q5VIR6 699 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 CYP4F22Q6NT55 531 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 RGMBQ6NW40 437 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 TEX11Q8IYF3 940 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 FAM43AQ8N2R8 423 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 LCORLQ8N3X6 602 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.03□□□□□ -0.96
LRRC28-211ENST00000558890 KCNB2Q92953 911 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 SYAP1Q96A49 352 aaPredicted RBP9.03□□□□□ -0.96
LRRC28-211ENST00000558890 CLMNQ96JQ2 1002 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 ZNF287Q9HBT7 754 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 AATFQ9NY61 560 aaKnown RBP eCLIP9.03□□□□□ -0.96
LRRC28-211ENST00000558890 SMC3Q9UQE7 1217 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 RBM8AQ9Y5S9 174 aaKnown RBP9.03□□□□□ -0.96
LRRC28-211ENST00000558890 CYP46A1Q9Y6A2 500 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 PAPPA2Q9BXP8 1791 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 FLT1P17948 1338 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 GSG1L2A8MUP6 293 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 M0R2C6 588 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 FOXP2O15409 715 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 TBC1D12O60347 775 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 PRPF40AO75400 957 aaKnown RBP9.02□□□□□ -0.97
LRRC28-211ENST00000558890 SLC10A3P09131 477 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 ZNF445P59923 1031 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 TCP10Q12799 353 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 RRP1BQ14684 758 aaKnown RBP9.02□□□□□ -0.97
LRRC28-211ENST00000558890 ANKRD1Q15327 319 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 CREB3L3Q68CJ9 461 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 TTC6Q86TZ1 520 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 ZNF589Q86UQ0 364 aaPredicted RBP9.02□□□□□ -0.97
LRRC28-211ENST00000558890 RASAL3Q86YV0 1011 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 REM2Q8IYK8 340 aaPredicted RBP9.02□□□□□ -0.97
LRRC28-211ENST00000558890 RASEFQ8IZ41 740 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 IFNL3Q8IZI9 196 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 MIGA1Q8NAN2 632 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 CAPNS2Q96L46 248 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 TTC14Q96N46 770 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 MTA3Q9BTC8 594 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 OSBPL5Q9H0X9 879 aaPredicted RBP9.02□□□□□ -0.97
LRRC28-211ENST00000558890 ZSWIM6Q9HCJ5 1215 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 DCP1AQ9NPI6 582 aaPredicted RBP9.02□□□□□ -0.97
LRRC28-211ENST00000558890 GINM1Q9NU53 330 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 LMBRD1Q9NUN5 540 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 WBP1LQ9NX94 342 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 HERC5Q9UII4 1024 aaKnown RBP9.02□□□□□ -0.97
LRRC28-211ENST00000558890 ABT1Q9ULW3 272 aaKnown RBP9.02□□□□□ -0.97
LRRC28-211ENST00000558890 ZDHHC9Q9Y397 364 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 ATP6V1DQ9Y5K8 247 aa9.02□□□□□ -0.97
LRRC28-211ENST00000558890 GREB1LQ9C091 1923 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-211ENST00000558890 AOC2O75106 756 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 FGRP09769 529 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 PDIA4P13667 645 aaKnown RBP9.01□□□□□ -0.97
LRRC28-211ENST00000558890 MAP2K2P36507 400 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 USP5P45974 858 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 JAG1P78504 1218 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 PTH1RQ03431 593 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 EVX2Q03828 476 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 PRKG1Q13976 671 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 KRT32Q14532 448 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 NECTIN1Q15223 517 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 CAVIN1Q6NZI2 390 aaKnown RBP9.01□□□□□ -0.97
LRRC28-211ENST00000558890 MIGA2Q7L4E1 593 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 ARMC9Q7Z3E5 817 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 FOXP4Q8IVH2 680 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-211ENST00000558890 TGFBRAP1Q8WUH2 860 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 CSRNP1Q96S65 589 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 NAPBQ9H115 298 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 RNF41Q9H4P4 317 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-211ENST00000558890 DNAJC18Q9H819 358 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 ARMT1Q9H993 441 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 PI4KBQ9UBF8 816 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 SWAP70Q9UH65 585 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 ANGEL1Q9UNK9 670 aaKnown RBP9.01□□□□□ -0.97
LRRC28-211ENST00000558890 SLC4A4Q9Y6R1 1079 aa9.01□□□□□ -0.97
LRRC28-211ENST00000558890 PLIN4Q96Q06 1357 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 SMIM22K7EJ46 135 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 SLC27A2O14975 620 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 PRKAB2O43741 272 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 PPP1R12BO60237 982 aaPredicted RBP9□□□□□ -0.97
LRRC28-211ENST00000558890 HLA-DOAP06340 250 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 SLC3A2P08195 630 aaKnown RBP9□□□□□ -0.97
LRRC28-211ENST00000558890 INPP5BP32019 993 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 ZNF157P51786 506 aaPredicted RBP9□□□□□ -0.97
LRRC28-211ENST00000558890 GABPAQ06546 454 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 IMMTQ16891 758 aaKnown RBP9□□□□□ -0.97
LRRC28-211ENST00000558890 PPP4R3BQ5MIZ7 849 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 C12orf60Q5U649 245 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 FOXD4L5Q5VV16 416 aaPredicted RBP9□□□□□ -0.97
LRRC28-211ENST00000558890 SPRYD7Q5W111 196 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 BLOC1S2Q6QNY1 142 aa9□□□□□ -0.97
LRRC28-211ENST00000558890 RUFY3Q7L099 469 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 1184.2 ms