RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 MOGSQ13724 837 aa16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 TATDN1Q6P1N9 297 aa16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 CTR9Q6PD62 1173 aa16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 EPB41L4AQ9HCS5 686 aaPredicted RBP16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 SAGE1Q9NXZ1 904 aa16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 KCNH4Q9UQ05 1017 aa16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 BAZ2AQ9UIF9 1905 aaKnown RBP16.6■□□□□ 0.25
TSPAN3-205ENST00000558745 APPP05067 770 aa16.6■□□□□ 0.25
TSPAN3-205ENST00000558745 SPP2Q13103 211 aa16.6■□□□□ 0.25
TSPAN3-205ENST00000558745 NMIQ13287 307 aaPredicted RBP16.6■□□□□ 0.25
TSPAN3-205ENST00000558745 LRRFIP1Q32MZ4 808 aaKnown RBP16.6■□□□□ 0.25
TSPAN3-205ENST00000558745 C12orf60Q5U649 245 aa16.6■□□□□ 0.25
TSPAN3-205ENST00000558745 EHD4Q9H223 541 aa16.6■□□□□ 0.25
TSPAN3-205ENST00000558745 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 A0A0D9SFI3 127 aa16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 MINDY4BA8MYZ0 360 aa16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 PATL2C9JE40 543 aaKnown RBP16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 CXCL11O14625 94 aa16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 GH2P01242 217 aa16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 CRHR2Q13324 411 aa16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 VPS53Q5VIR6 699 aa16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 IFNL3Q8IZI9 196 aa16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 ZBTB21Q9ULJ3 1066 aa16.59■□□□□ 0.25
TSPAN3-205ENST00000558745 DOCK1Q14185 1865 aa16.58■□□□□ 0.24
TSPAN3-205ENST00000558745 USP17L5A8MUK1 530 aa16.58■□□□□ 0.24
TSPAN3-205ENST00000558745 GSPT1P15170 499 aaKnown RBP16.58■□□□□ 0.24
TSPAN3-205ENST00000558745 SDSP20132 328 aa16.58■□□□□ 0.24
TSPAN3-205ENST00000558745 PRPF38BQ5VTL8 546 aaKnown RBP16.58■□□□□ 0.24
TSPAN3-205ENST00000558745 OTUD7BQ6GQQ9 843 aa16.58■□□□□ 0.24
TSPAN3-205ENST00000558745 GPAT2Q6NUI2 795 aa16.58■□□□□ 0.24
TSPAN3-205ENST00000558745 GADL1Q6ZQY3 521 aa16.58■□□□□ 0.24
TSPAN3-205ENST00000558745 DDX60LQ5H9U9 1706 aaKnown RBP16.58■□□□□ 0.24
TSPAN3-205ENST00000558745 PHIPQ8WWQ0 1821 aa16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 GPR25O00155 361 aa16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 FOXP2O15409 715 aa16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 ALDH1A1P00352 501 aa16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 CDK8P49336 464 aa16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 TAF1CQ15572 869 aaPredicted RBP16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 ABCB5Q2M3G0 1257 aa16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 TTC22Q5TAA0 569 aa16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 ZNF280CQ8ND82 737 aa16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 ZNF296Q8WUU4 475 aaPredicted RBP16.57■□□□□ 0.24
TSPAN3-205ENST00000558745 A0A0G2JLL6 359 aaPredicted RBP16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 PDHXO00330 501 aa16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 MPHOSPH10O00566 681 aaKnown RBP16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 ASNSP08243 561 aa16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 TDO2P48775 406 aa16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 RAB3GAP1Q15042 981 aa16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 MCMDC2Q4G0Z9 681 aa16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 PRRT2Q7Z6L0 340 aaPredicted RBP16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 DDRGK1Q96HY6 314 aa16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 HELLSQ9NRZ9 838 aa16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 ATAD5Q96QE3 1844 aa16.56■□□□□ 0.24
TSPAN3-205ENST00000558745 ECM2O94769 699 aaPredicted RBP16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 CYP2C8P10632 490 aa16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 AKR1B1P15121 316 aa16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 GNAT2P19087 354 aa16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 HMGCS2P54868 508 aa16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 SEPT2Q15019 361 aa16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 SBK1Q52WX2 424 aa16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 TREML2Q5T2D2 321 aa16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 ANKRD23Q86SG2 305 aa16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 ACER1Q8TDN7 264 aa16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 CFHR5Q9BXR6 569 aa16.55■□□□□ 0.24
TSPAN3-205ENST00000558745 NEFLP07196 543 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 CAP1Q01518 475 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 MTMR2Q13614 643 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 GIMAP6Q6P9H5 292 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 CENPQQ7L2Z9 268 aaPredicted RBP16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 CLEC10AQ8IUN9 316 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 AMOTL1Q8IY63 956 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 CCDC136Q96JN2 1154 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 AS3MTQ9HBK9 375 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 ZFYVE28Q9HCC9 887 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 CABP5Q9NP86 173 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 INCENPQ9NQS7 918 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 ARPP21Q9UBL0 812 aaPredicted RBP16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 LAMB1P07942 1786 aa16.54■□□□□ 0.24
TSPAN3-205ENST00000558745 PRDM1O75626 825 aa16.53■□□□□ 0.24
TSPAN3-205ENST00000558745 ZYXQ15942 572 aaKnown RBP16.53■□□□□ 0.24
TSPAN3-205ENST00000558745 FASTKD5Q7L8L6 764 aaKnown RBP16.53■□□□□ 0.24
TSPAN3-205ENST00000558745 SWAP70Q9UH65 585 aa16.53■□□□□ 0.24
TSPAN3-205ENST00000558745 CPA4Q9UI42 421 aa16.53■□□□□ 0.24
TSPAN3-205ENST00000558745 FKTNO75072 461 aa16.52■□□□□ 0.24
TSPAN3-205ENST00000558745 BACE1P56817 501 aa16.52■□□□□ 0.24
TSPAN3-205ENST00000558745 NAPBQ9H115 298 aa16.52■□□□□ 0.24
TSPAN3-205ENST00000558745 IL25Q9H293 177 aa16.52■□□□□ 0.24
TSPAN3-205ENST00000558745 TACC3Q9Y6A5 838 aa16.52■□□□□ 0.24
TSPAN3-205ENST00000558745 A0A1W2PRG0 241 aa16.51■□□□□ 0.23
TSPAN3-205ENST00000558745 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
TSPAN3-205ENST00000558745 HSPD1P10809 573 aaKnown RBP16.51■□□□□ 0.23
TSPAN3-205ENST00000558745 CTDSPL2Q05D32 466 aa16.51■□□□□ 0.23
TSPAN3-205ENST00000558745 SH3D19Q5HYK7 790 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms