RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 SBF1O95248 1867 aa8.34□□□□□ -1.07
ZEB1-211ENST00000558440 C9orf172C9J069 976 aa8.34□□□□□ -1.07
ZEB1-211ENST00000558440 TOMM70O94826 608 aa8.34□□□□□ -1.07
ZEB1-211ENST00000558440 MMP10P09238 476 aa8.34□□□□□ -1.07
ZEB1-211ENST00000558440 NAA30Q147X3 362 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-211ENST00000558440 DMRTC2Q8IXT2 367 aaPredicted RBP8.34□□□□□ -1.07
ZEB1-211ENST00000558440 LINC00116Q8NCU8 138 aa8.34□□□□□ -1.07
ZEB1-211ENST00000558440 ZNF831Q5JPB2 1677 aa8.34□□□□□ -1.08
ZEB1-211ENST00000558440 MYH14Q7Z406 1995 aaKnown RBP8.33□□□□□ -1.08
ZEB1-211ENST00000558440 PXDNLA1KZ92 1463 aa8.33□□□□□ -1.08
ZEB1-211ENST00000558440 MMP20O60882 483 aa8.33□□□□□ -1.08
ZEB1-211ENST00000558440 SELPP16109 830 aa8.33□□□□□ -1.08
ZEB1-211ENST00000558440 TMF1P82094 1093 aa8.33□□□□□ -1.08
ZEB1-211ENST00000558440 PLAURQ03405 335 aa8.33□□□□□ -1.08
ZEB1-211ENST00000558440 TRIP4Q15650 581 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-211ENST00000558440 CCDC88AQ3V6T2 1871 aa8.33□□□□□ -1.08
ZEB1-211ENST00000558440 FMR1NBQ8N0W7 255 aaPredicted RBP8.33□□□□□ -1.08
ZEB1-211ENST00000558440 NCAPD2Q15021 1401 aa8.32□□□□□ -1.08
ZEB1-211ENST00000558440 PPM1GO15355 546 aaPredicted RBP8.32□□□□□ -1.08
ZEB1-211ENST00000558440 HOXD8P13378 290 aaPredicted RBP8.32□□□□□ -1.08
ZEB1-211ENST00000558440 ATP2B4P23634 1241 aa8.32□□□□□ -1.08
ZEB1-211ENST00000558440 SOX18P35713 384 aa8.32□□□□□ -1.08
ZEB1-211ENST00000558440 TGFB2P61812 414 aa8.32□□□□□ -1.08
ZEB1-211ENST00000558440 ADGRE1Q14246 886 aa8.32□□□□□ -1.08
ZEB1-211ENST00000558440 ARHGAP27Q6ZUM4 889 aa8.32□□□□□ -1.08
ZEB1-211ENST00000558440 HFE2Q6ZVN8 426 aa8.32□□□□□ -1.08
ZEB1-211ENST00000558440 C16orf71Q8IYS4 520 aaPredicted RBP8.32□□□□□ -1.08
ZEB1-211ENST00000558440 DTWD1Q8N5C7 304 aa8.32□□□□□ -1.08
ZEB1-211ENST00000558440 TPSG1Q9NRR2 321 aa8.32□□□□□ -1.08
ZEB1-211ENST00000558440 FAM13BQ9NYF5 915 aa8.32□□□□□ -1.08
ZEB1-211ENST00000558440 TNRC6CQ9HCJ0 1690 aaKnown RBP8.32□□□□□ -1.08
ZEB1-211ENST00000558440 C10orf71Q711Q0 1435 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 A0A0G2JLW4 131 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 PSAPP07602 524 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 EIF2AK2P19525 551 aaKnown RBP8.31□□□□□ -1.08
ZEB1-211ENST00000558440 ITPK1Q13572 414 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 IFNL2Q8IZJ0 200 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 NLGN1Q8N2Q7 840 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 PIK3R5Q8WYR1 880 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 LENG1Q96BZ8 264 aaPredicted RBP8.31□□□□□ -1.08
ZEB1-211ENST00000558440 SMG9Q9H0W8 520 aaKnown RBP8.31□□□□□ -1.08
ZEB1-211ENST00000558440 CCDC87Q9NVE4 849 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 STIM2Q9P246 746 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 ASAP1Q9ULH1 1129 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 PLEKHG2Q9H7P9 1386 aa8.31□□□□□ -1.08
ZEB1-211ENST00000558440 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
ZEB1-211ENST00000558440 PHKG2P15735 406 aa8.3□□□□□ -1.08
ZEB1-211ENST00000558440 ZAP70P43403 619 aa8.3□□□□□ -1.08
ZEB1-211ENST00000558440 MBTPS1Q14703 1052 aa8.3□□□□□ -1.08
ZEB1-211ENST00000558440 RSPO4Q2I0M5 234 aaPredicted RBP8.3□□□□□ -1.08
ZEB1-211ENST00000558440 SHISA2Q6UWI4 295 aa8.3□□□□□ -1.08
ZEB1-211ENST00000558440 WFDC8Q8IUA0 241 aa8.3□□□□□ -1.08
ZEB1-211ENST00000558440 CCDC82Q8N4S0 544 aa8.3□□□□□ -1.08
ZEB1-211ENST00000558440 DNAJC5GQ8N7S2 189 aa8.3□□□□□ -1.08
ZEB1-211ENST00000558440 SEMA6BQ9H3T3 888 aa8.3□□□□□ -1.08
ZEB1-211ENST00000558440 NMRK2Q9NPI5 230 aa8.3□□□□□ -1.08
ZEB1-211ENST00000558440 J3QW42 95 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 DPEP1P16444 411 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 ITGB7P26010 798 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 RFC4P35249 363 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 NRG1Q02297 640 aaPredicted RBP8.29□□□□□ -1.08
ZEB1-211ENST00000558440 NKAPLQ5M9Q1 402 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 ZMYM1Q5SVZ6 1142 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 C9orf131Q5VYM1 1079 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 TXNRD3Q86VQ6 643 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 KRTAP1-3Q8IUG1 177 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 NSUN5Q96P11 429 aaKnown RBP8.29□□□□□ -1.08
ZEB1-211ENST00000558440 ATG3Q9NT62 314 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 KDRP35968 1356 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 WASHC2AQ641Q2 1341 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
ZEB1-211ENST00000558440 FSTL1Q12841 308 aa8.28□□□□□ -1.08
ZEB1-211ENST00000558440 FBXO11Q86XK2 927 aa8.28□□□□□ -1.08
ZEB1-211ENST00000558440 PLD4Q96BZ4 506 aa8.28□□□□□ -1.08
ZEB1-211ENST00000558440 AFDNP55196 1824 aaKnown RBP8.28□□□□□ -1.08
ZEB1-211ENST00000558440 KCPQ6ZWJ8 1503 aa8.28□□□□□ -1.08
ZEB1-211ENST00000558440 CNTNAP4Q9C0A0 1308 aa8.28□□□□□ -1.08
ZEB1-211ENST00000558440 ERVV-2B6SEH9 535 aa8.27□□□□□ -1.09
ZEB1-211ENST00000558440 ZBTB39O15060 712 aa8.27□□□□□ -1.09
ZEB1-211ENST00000558440 GHRHP01286 108 aa8.27□□□□□ -1.09
ZEB1-211ENST00000558440 HSP90AB1P08238 724 aaKnown RBP8.27□□□□□ -1.09
ZEB1-211ENST00000558440 GYS1P13807 737 aa8.27□□□□□ -1.09
ZEB1-211ENST00000558440 DALRD3Q5D0E6 543 aaKnown RBP8.27□□□□□ -1.09
ZEB1-211ENST00000558440 GPR152Q8TDT2 470 aa8.27□□□□□ -1.09
ZEB1-211ENST00000558440 RBSNQ9H1K0 784 aa8.27□□□□□ -1.09
ZEB1-211ENST00000558440 PIM2Q9P1W9 311 aa8.27□□□□□ -1.09
ZEB1-211ENST00000558440 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
ZEB1-211ENST00000558440 FNDC3AQ9Y2H6 1198 aaKnown RBP8.27□□□□□ -1.09
ZEB1-211ENST00000558440 SCN11AQ9UI33 1791 aa8.27□□□□□ -1.09
ZEB1-211ENST00000558440 DLEC1Q9Y238 1755 aa8.27□□□□□ -1.09
ZEB1-211ENST00000558440 TJP1Q07157 1748 aa8.26□□□□□ -1.09
ZEB1-211ENST00000558440 TIAM2Q8IVF5 1701 aa8.26□□□□□ -1.09
ZEB1-211ENST00000558440 RPS6KA4O75676 772 aa8.26□□□□□ -1.09
ZEB1-211ENST00000558440 HTRA3P83110 453 aa8.26□□□□□ -1.09
ZEB1-211ENST00000558440 OR13H1Q8NG92 308 aa8.26□□□□□ -1.09
ZEB1-211ENST00000558440 RNF181Q9P0P0 153 aa8.26□□□□□ -1.09
ZEB1-211ENST00000558440 DICER1Q9UPY3 1922 aaKnown RBP8.25□□□□□ -1.09
ZEB1-211ENST00000558440 CABP4P57796 275 aa8.25□□□□□ -1.09
ZEB1-211ENST00000558440 COL13A1Q5TAT6 717 aaPredicted RBP8.25□□□□□ -1.09
ZEB1-211ENST00000558440 JMYQ8N9B5 988 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms