RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 CASP14P31944 242 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 TFCP2Q12800 502 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 SLC9C2Q5TAH2 1124 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 CDKAL1Q5VV42 579 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 EP400NLQ6ZTU2 488 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 AENQ8WTP8 325 aaKnown RBP12.67□□□□□ -0.38
PCAT29-201ENST00000558411 FAM184BQ9ULE4 1060 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 MYH8P13535 1937 aa12.67□□□□□ -0.38
PCAT29-201ENST00000558411 ECM29Q5VYK3 1845 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 H0YHG0 523 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 PPP1R12AO14974 1030 aaPredicted RBP12.66□□□□□ -0.38
PCAT29-201ENST00000558411 FOXN1O15353 648 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 CALRP27797 417 aaKnown RBP12.66□□□□□ -0.38
PCAT29-201ENST00000558411 RFX5P48382 616 aaPredicted RBP12.66□□□□□ -0.38
PCAT29-201ENST00000558411 IQCEQ6IPM2 695 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 ZNF662Q6ZS27 426 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 KLHDC4Q8TBB5 520 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 TBC1D22AQ8WUA7 517 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 ZKSCAN4Q969J2 545 aaPredicted RBP12.66□□□□□ -0.38
PCAT29-201ENST00000558411 MIEF2Q96C03 454 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 ABHD10Q9NUJ1 306 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 GGA2Q9UJY4 613 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 SAR1BQ9Y6B6 198 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 PLEKHG1Q9ULL1 1385 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
PCAT29-201ENST00000558411 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
PCAT29-201ENST00000558411 KIF3CO14782 793 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 KCNQ3O43525 872 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 PRC1O43663 620 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 ERCC3P19447 782 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 ERVK-24P63145 666 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 SKIDA1Q1XH10 827 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 WLSQ5T9L3 541 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 KRT40Q6A162 431 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 MB21D2Q8IYB1 491 aaPredicted RBP12.65□□□□□ -0.38
PCAT29-201ENST00000558411 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
PCAT29-201ENST00000558411 EHBP1Q8NDI1 1231 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 CPLX3Q8WVH0 158 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 DBNDD2Q9BQY9 259 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 HAUS4Q9H6D7 363 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 GJB4Q9NTQ9 266 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 PAG1Q9NWQ8 432 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 ADAMTSL3P82987 1691 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 MAST3O60307 1309 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 FXR1P51114 621 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCAT29-201ENST00000558411 SMTNP53814 917 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 CCDC70Q6NSX1 233 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 CPLX2Q6PUV4 134 aaKnown RBP12.65□□□□□ -0.38
PCAT29-201ENST00000558411 MMS19Q96T76 1030 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 ESF1Q9H501 851 aaKnown RBP12.65□□□□□ -0.38
PCAT29-201ENST00000558411 VEZTQ9HBM0 779 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 BCCIPQ9P287 314 aaKnown RBP eCLIP12.65□□□□□ -0.38
PCAT29-201ENST00000558411 NDUFB9Q9Y6M9 179 aa12.65□□□□□ -0.38
PCAT29-201ENST00000558411 CPDO75976 1380 aa12.65□□□□□ -0.39
PCAT29-201ENST00000558411 SYNRGQ9UMZ2 1314 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 A0A0G2JLW4 131 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 NDUFAB1O14561 156 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 NF2P35240 595 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 HDGFP51858 240 aaKnown RBP12.64□□□□□ -0.39
PCAT29-201ENST00000558411 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
PCAT29-201ENST00000558411 PTPN12Q05209 780 aaKnown RBP12.64□□□□□ -0.39
PCAT29-201ENST00000558411 DRP2Q13474 957 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 ALS2CLQ60I27 953 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 LGR6Q9HBX8 967 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
PCAT29-201ENST00000558411 MYO5AQ9Y4I1 1855 aaKnown RBP12.64□□□□□ -0.39
PCAT29-201ENST00000558411 PARP4Q9UKK3 1724 aaKnown RBP12.64□□□□□ -0.39
PCAT29-201ENST00000558411 RNF113AO15541 343 aaKnown RBP12.64□□□□□ -0.39
PCAT29-201ENST00000558411 ABL1P00519 1130 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 IGKV5-2P06315 115 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 GCFC2P16383 781 aaKnown RBP12.64□□□□□ -0.39
PCAT29-201ENST00000558411 IMMTQ16891 758 aaKnown RBP12.64□□□□□ -0.39
PCAT29-201ENST00000558411 ANKRD18AQ8IVF6 992 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 MAGEC3Q8TD91 643 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 DDX21Q9NR30 783 aaKnown RBP eCLIP12.64□□□□□ -0.39
PCAT29-201ENST00000558411 SERTAD1Q9UHV2 236 aa12.64□□□□□ -0.39
PCAT29-201ENST00000558411 SRRM3A6NNA2 597 aaPredicted RBP12.63□□□□□ -0.39
PCAT29-201ENST00000558411 NEURL1BA8MQ27 555 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 MYO1FO00160 1098 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 CLSTN1O94985 981 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 PTPREP23469 700 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 ITIH3Q06033 890 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 CUL4BQ13620 913 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 EMC10Q5UCC4 262 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 LRCH2Q5VUJ6 765 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 NCOA7Q8NI08 942 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 VCPKMTQ9H867 229 aa12.63□□□□□ -0.39
PCAT29-201ENST00000558411 ANO9A1A5B4 782 aa12.62□□□□□ -0.39
PCAT29-201ENST00000558411 POLR2DO15514 142 aaKnown RBP12.62□□□□□ -0.39
PCAT29-201ENST00000558411 ACTN4O43707 911 aaKnown RBP12.62□□□□□ -0.39
PCAT29-201ENST00000558411 TRIM29Q14134 588 aa12.62□□□□□ -0.39
PCAT29-201ENST00000558411 GCKRQ14397 625 aa12.62□□□□□ -0.39
PCAT29-201ENST00000558411 CRYMQ14894 314 aa12.62□□□□□ -0.39
PCAT29-201ENST00000558411 ZNF827Q17R98 1081 aa12.62□□□□□ -0.39
PCAT29-201ENST00000558411 RABL6Q3YEC7 729 aaPredicted RBP12.62□□□□□ -0.39
PCAT29-201ENST00000558411 AKAP4Q5JQC9 854 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms