RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 DEFB129Q9H1M3 183 aa19.84■□□□□ 0.77
SNX1-203ENST00000558040 SIPA1L1O43166 1804 aa19.83■□□□□ 0.77
SNX1-203ENST00000558040 SH2B2O14492 632 aaPredicted RBP19.83■□□□□ 0.77
SNX1-203ENST00000558040 TFAP4Q01664 338 aa19.83■□□□□ 0.77
SNX1-203ENST00000558040 PNMA8AQ86V59 439 aaPredicted RBP19.83■□□□□ 0.77
SNX1-203ENST00000558040 TMTC2Q8N394 836 aa19.83■□□□□ 0.77
SNX1-203ENST00000558040 ZC3H15Q8WU90 426 aaKnown RBP19.83■□□□□ 0.77
SNX1-203ENST00000558040 CCDC17Q96LX7 622 aa19.83■□□□□ 0.77
SNX1-203ENST00000558040 ZSCAN10Q96SZ4 725 aaPredicted RBP19.83■□□□□ 0.77
SNX1-203ENST00000558040 TAF1DQ9H5J8 278 aaPredicted RBP19.83■□□□□ 0.77
SNX1-203ENST00000558040 SH2B1Q9NRF2 756 aaPredicted RBP19.83■□□□□ 0.77
SNX1-203ENST00000558040 TBC1D12O60347 775 aa19.82■□□□□ 0.76
SNX1-203ENST00000558040 SHMT1P34896 483 aa19.82■□□□□ 0.76
SNX1-203ENST00000558040 LIFRP42702 1097 aa19.82■□□□□ 0.76
SNX1-203ENST00000558040 WTAPQ15007 396 aa19.82■□□□□ 0.76
SNX1-203ENST00000558040 FAM47AQ5JRC9 791 aa19.82■□□□□ 0.76
SNX1-203ENST00000558040 NKX2-3Q8TAU0 364 aa19.82■□□□□ 0.76
SNX1-203ENST00000558040 IGDCC4Q8TDY8 1250 aa19.82■□□□□ 0.76
SNX1-203ENST00000558040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.82■□□□□ 0.764e-8■■■■■ 48
SNX1-203ENST00000558040 TCP11L1Q9NUJ3 509 aa19.82■□□□□ 0.76
SNX1-203ENST00000558040 MYH8P13535 1937 aa19.82■□□□□ 0.76
SNX1-203ENST00000558040 PLIN4Q96Q06 1357 aa19.82■□□□□ 0.76
SNX1-203ENST00000558040 TNKSO95271 1327 aa19.81■□□□□ 0.76
SNX1-203ENST00000558040 TATDN1Q6P1N9 297 aa19.81■□□□□ 0.76
SNX1-203ENST00000558040 NFXL1Q6ZNB6 911 aa19.81■□□□□ 0.76
SNX1-203ENST00000558040 SULF1Q8IWU6 871 aa19.81■□□□□ 0.76
SNX1-203ENST00000558040 NEDD1Q8NHV4 660 aa19.81■□□□□ 0.76
SNX1-203ENST00000558040 TMX3Q96JJ7 454 aa19.81■□□□□ 0.76
SNX1-203ENST00000558040 ZKSCAN3Q9BRR0 538 aa19.81■□□□□ 0.76
SNX1-203ENST00000558040 DNAJC18Q9H819 358 aa19.81■□□□□ 0.76
SNX1-203ENST00000558040 PGAP2Q9UHJ9 254 aa19.81■□□□□ 0.76
SNX1-203ENST00000558040 CCDC69A6NI79 296 aa19.8■□□□□ 0.76
SNX1-203ENST00000558040 HSP90AA1P07900 732 aaKnown RBP19.8■□□□□ 0.76
SNX1-203ENST00000558040 CERKLQ49MI3 558 aaPredicted RBP19.8■□□□□ 0.76
SNX1-203ENST00000558040 PPP4R3BQ5MIZ7 849 aa19.8■□□□□ 0.76
SNX1-203ENST00000558040 SGMS1Q86VZ5 419 aa19.8■□□□□ 0.76
SNX1-203ENST00000558040 TEPSINQ96N21 525 aa19.8■□□□□ 0.76
SNX1-203ENST00000558040 LY9Q9HBG7 655 aa19.8■□□□□ 0.76
SNX1-203ENST00000558040 TPCN1Q9ULQ1 816 aa19.8■□□□□ 0.76
SNX1-203ENST00000558040 SRCAPQ6ZRS2 3230 aa19.79■□□□□ 0.76
SNX1-203ENST00000558040 FAM196BA6NMK8 535 aa19.79■□□□□ 0.76
SNX1-203ENST00000558040 EVCP57679 992 aa19.79■□□□□ 0.76
SNX1-203ENST00000558040 APOBRQ0VD83 1088 aa19.79■□□□□ 0.76
SNX1-203ENST00000558040 EAPPQ56P03 285 aaPredicted RBP19.79■□□□□ 0.76
SNX1-203ENST00000558040 IFIT1BQ5T764 474 aaKnown RBP19.79■□□□□ 0.76
SNX1-203ENST00000558040 DCAF15Q66K64 600 aa19.79■□□□□ 0.76
SNX1-203ENST00000558040 SYNE3Q6ZMZ3 975 aa19.79■□□□□ 0.76
SNX1-203ENST00000558040 CHMP4CQ96CF2 233 aa19.79■□□□□ 0.76
SNX1-203ENST00000558040 ZNF274Q96GC6 653 aaPredicted RBP19.79■□□□□ 0.76
SNX1-203ENST00000558040 LARP6Q9BRS8 491 aaKnown RBP19.79■□□□□ 0.76
SNX1-203ENST00000558040 SCAF8Q9UPN6 1271 aaKnown RBP19.79■□□□□ 0.76
SNX1-203ENST00000558040 KLF18A0A0U1RQI7 1052 aa19.78■□□□□ 0.76
SNX1-203ENST00000558040 POTECB2RU33 542 aa19.78■□□□□ 0.76
SNX1-203ENST00000558040 MPHOSPH10O00566 681 aaKnown RBP19.78■□□□□ 0.76
SNX1-203ENST00000558040 AKR1B1P15121 316 aa19.78■□□□□ 0.76
SNX1-203ENST00000558040 VEGFAP15692 232 aaPredicted RBP19.78■□□□□ 0.76
SNX1-203ENST00000558040 MAP3K10Q02779 954 aa19.78■□□□□ 0.76
SNX1-203ENST00000558040 SEC23AQ15436 765 aa19.78■□□□□ 0.76
SNX1-203ENST00000558040 DGKHQ86XP1 1220 aa19.78■□□□□ 0.76
SNX1-203ENST00000558040 ENAHQ8N8S7 591 aaPredicted RBP19.78■□□□□ 0.76
SNX1-203ENST00000558040 GPHNQ9NQX3 736 aaPredicted RBP19.78■□□□□ 0.76
SNX1-203ENST00000558040 NAP1L2Q9ULW6 460 aaPredicted RBP19.78■□□□□ 0.76
SNX1-203ENST00000558040 ME3Q16798 604 aa19.77■□□□□ 0.76
SNX1-203ENST00000558040 SUPT20HL1Q3ZLR7 823 aa19.77■□□□□ 0.76
SNX1-203ENST00000558040 CDAN1Q8IWY9 1227 aa19.77■□□□□ 0.76
SNX1-203ENST00000558040 SLKQ9H2G2 1235 aaPredicted RBP19.77■□□□□ 0.76
SNX1-203ENST00000558040 CABP5Q9NP86 173 aa19.77■□□□□ 0.76
SNX1-203ENST00000558040 SLC12A7Q9Y666 1083 aa19.77■□□□□ 0.76
SNX1-203ENST00000558040 GOLGA8BA8MQT2 603 aa19.76■□□□□ 0.75
SNX1-203ENST00000558040 NMT2O60551 498 aa19.76■□□□□ 0.75
SNX1-203ENST00000558040 SLC4A3P48751 1232 aa19.76■□□□□ 0.75
SNX1-203ENST00000558040 CUL4AQ13619 759 aa19.76■□□□□ 0.75
SNX1-203ENST00000558040 ABCB5Q2M3G0 1257 aa19.76■□□□□ 0.75
SNX1-203ENST00000558040 TMEM179Q6ZVK1 233 aa19.76■□□□□ 0.75
SNX1-203ENST00000558040 KRT26Q7Z3Y9 468 aa19.76■□□□□ 0.75
SNX1-203ENST00000558040 ANKS1AQ92625 1134 aa19.76■□□□□ 0.75
SNX1-203ENST00000558040 IL17RBQ9NRM6 502 aa19.76■□□□□ 0.75
SNX1-203ENST00000558040 ZBTB43O43298 467 aa19.75■□□□□ 0.75
SNX1-203ENST00000558040 PFKFB2O60825 505 aa19.75■□□□□ 0.75
SNX1-203ENST00000558040 PDIA3P30101 505 aaKnown RBP19.75■□□□□ 0.75
SNX1-203ENST00000558040 RCAN1P53805 252 aa19.75■□□□□ 0.75
SNX1-203ENST00000558040 NBPF12Q5TAG4 269 aaPredicted RBP19.75■□□□□ 0.75
SNX1-203ENST00000558040 APOA5Q6Q788 366 aa19.75■□□□□ 0.75
SNX1-203ENST00000558040 MIGA2Q7L4E1 593 aa19.75■□□□□ 0.75
SNX1-203ENST00000558040 CATIPQ7Z7H3 387 aa19.75■□□□□ 0.75
SNX1-203ENST00000558040 KAT14Q9H8E8 782 aa19.75■□□□□ 0.75
SNX1-203ENST00000558040 RRAGCQ9HB90 399 aa19.75■□□□□ 0.75
SNX1-203ENST00000558040 BRPF3Q9ULD4 1205 aa19.75■□□□□ 0.75
SNX1-203ENST00000558040 STX8Q9UNK0 236 aa19.75■□□□□ 0.75
SNX1-203ENST00000558040 IGKV6D-41A0A0C4DH26 115 aa19.74■□□□□ 0.75
SNX1-203ENST00000558040 DHX16O60231 1041 aaKnown RBP19.74■□□□□ 0.75
SNX1-203ENST00000558040 LARGE1O95461 756 aa19.74■□□□□ 0.75
SNX1-203ENST00000558040 CALM1P0DP23 149 aa19.74■□□□□ 0.75
SNX1-203ENST00000558040 CALM2P0DP24 149 aa19.74■□□□□ 0.75
SNX1-203ENST00000558040 CALM3P0DP25 149 aa19.74■□□□□ 0.75
SNX1-203ENST00000558040 SLURP2P0DP57 97 aa19.74■□□□□ 0.75
SNX1-203ENST00000558040 STK3Q13188 491 aa19.74■□□□□ 0.75
SNX1-203ENST00000558040 CEP95Q96GE4 821 aa19.74■□□□□ 0.75
SNX1-203ENST00000558040 INTS4Q96HW7 963 aaKnown RBP19.74■□□□□ 0.75
SNX1-203ENST00000558040 ZNF341Q9BYN7 854 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms