RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 TACC3Q9Y6A5 838 aa25.21■■□□□ 1.63
CASC4-204ENST00000557945 UNCXA6NJT0 531 aa25.2■■□□□ 1.63
CASC4-204ENST00000557945 SLC27A2O14975 620 aa25.2■■□□□ 1.63
CASC4-204ENST00000557945 HSPA6P17066 643 aa25.2■■□□□ 1.63
CASC4-204ENST00000557945 RASA1P20936 1047 aa25.2■■□□□ 1.63
CASC4-204ENST00000557945 NECTIN1Q15223 517 aa25.2■■□□□ 1.63
CASC4-204ENST00000557945 NOL9Q5SY16 702 aaKnown RBP25.2■■□□□ 1.63
CASC4-204ENST00000557945 RNF20Q5VTR2 975 aa25.2■■□□□ 1.63
CASC4-204ENST00000557945 PAXIP1Q6ZW49 1069 aaPredicted RBP25.2■■□□□ 1.63
CASC4-204ENST00000557945 CABP5Q9NP86 173 aa25.2■■□□□ 1.63
CASC4-204ENST00000557945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.2■■□□□ 1.63
CASC4-204ENST00000557945 SNCAIPQ9Y6H5 919 aa25.2■■□□□ 1.63
CASC4-204ENST00000557945 SEC24BO95487 1268 aa25.19■■□□□ 1.62
CASC4-204ENST00000557945 GH2P01242 217 aa25.19■■□□□ 1.62
CASC4-204ENST00000557945 AKR1B1P15121 316 aa25.19■■□□□ 1.62
CASC4-204ENST00000557945 ZNF157P51786 506 aaPredicted RBP25.19■■□□□ 1.62
CASC4-204ENST00000557945 HTRA3P83110 453 aa25.19■■□□□ 1.62
CASC4-204ENST00000557945 SHROOM1Q2M3G4 852 aaPredicted RBP25.19■■□□□ 1.62
CASC4-204ENST00000557945 RGMBQ6NW40 437 aa25.19■■□□□ 1.62
CASC4-204ENST00000557945 CCDC17Q96LX7 622 aa25.19■■□□□ 1.62
CASC4-204ENST00000557945 LAMA4Q16363 1823 aa25.19■■□□□ 1.62
CASC4-204ENST00000557945 RANBP6O60518 1105 aaKnown RBP25.18■■□□□ 1.62
CASC4-204ENST00000557945 PCP11498 1178 aaKnown RBP25.18■■□□□ 1.62
CASC4-204ENST00000557945 JAG1P78504 1218 aa25.18■■□□□ 1.62
CASC4-204ENST00000557945 USP26Q9BXU7 913 aa25.18■■□□□ 1.62
CASC4-204ENST00000557945 ZBTB21Q9ULJ3 1066 aa25.18■■□□□ 1.62
CASC4-204ENST00000557945 TAF6LQ9Y6J9 622 aa25.18■■□□□ 1.62
CASC4-204ENST00000557945 OTOFQ9HC10 1997 aa25.18■■□□□ 1.62
CASC4-204ENST00000557945 EPB41L2O43491 1005 aaKnown RBP25.18■■□□□ 1.62
CASC4-204ENST00000557945 ORC4O43929 436 aa25.18■■□□□ 1.62
CASC4-204ENST00000557945 ASNSP08243 561 aa25.18■■□□□ 1.62
CASC4-204ENST00000557945 RAB3GAP1Q15042 981 aa25.18■■□□□ 1.62
CASC4-204ENST00000557945 FAM47AQ5JRC9 791 aa25.18■■□□□ 1.62
CASC4-204ENST00000557945 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.18■■□□□ 1.62
CASC4-204ENST00000557945 FGRP09769 529 aa25.17■■□□□ 1.62
CASC4-204ENST00000557945 TFAP4Q01664 338 aa25.17■■□□□ 1.62
CASC4-204ENST00000557945 DEFB115Q30KQ5 88 aa25.17■■□□□ 1.62
CASC4-204ENST00000557945 GINM1Q9NU53 330 aa25.17■■□□□ 1.62
CASC4-204ENST00000557945 MYH8P13535 1937 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 NEDD4P46934 1319 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 TSPY2A6NKD2 308 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 E7EWF7 191 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 TSPY3P0CV98 308 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 TSPY8P0CW00 308 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 ZKSCAN1P17029 563 aaPredicted RBP25.16■■□□□ 1.62
CASC4-204ENST00000557945 PTPRAP18433 802 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 MCCP23508 829 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 HSPA4P34932 840 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 TRDNQ13061 729 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 GRM1Q13255 1194 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 TMEM179Q6ZVK1 233 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 CCDC84Q86UT8 332 aaPredicted RBP25.16■■□□□ 1.62
CASC4-204ENST00000557945 ERO1BQ86YB8 467 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 CNKSR2Q8WXI2 1034 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 OPTNQ96CV9 577 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 OTUD5Q96G74 571 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 HHIPL1Q96JK4 782 aa25.16■■□□□ 1.62
CASC4-204ENST00000557945 SEPT2Q15019 361 aa25.15■■□□□ 1.62
CASC4-204ENST00000557945 ESR2Q92731 530 aa25.15■■□□□ 1.62
CASC4-204ENST00000557945 KRT23Q9C075 422 aa25.15■■□□□ 1.62
CASC4-204ENST00000557945 CNNM2Q9H8M5 875 aa25.15■■□□□ 1.62
CASC4-204ENST00000557945 DOCK1Q14185 1865 aa25.14■■□□□ 1.62
CASC4-204ENST00000557945 SPDYE5A6NIY4 337 aa25.14■■□□□ 1.61
CASC4-204ENST00000557945 RASSF10A6NK89 507 aa25.14■■□□□ 1.61
CASC4-204ENST00000557945 USP17L5A8MUK1 530 aa25.14■■□□□ 1.61
CASC4-204ENST00000557945 B4E1Z4 1266 aa25.14■■□□□ 1.61
CASC4-204ENST00000557945 MKRN3Q13064 507 aaKnown RBP25.14■■□□□ 1.61
CASC4-204ENST00000557945 STOX1Q6ZVD7 989 aa25.14■■□□□ 1.61
CASC4-204ENST00000557945 ZHX2Q9Y6X8 837 aa25.14■■□□□ 1.61
CASC4-204ENST00000557945 CYP4F22Q6NT55 531 aa25.13■■□□□ 1.61
CASC4-204ENST00000557945 RALYLQ86SE5 291 aaKnown RBP25.13■■□□□ 1.61
CASC4-204ENST00000557945 RASAL3Q86YV0 1011 aa25.13■■□□□ 1.61
CASC4-204ENST00000557945 RASEFQ8IZ41 740 aa25.13■■□□□ 1.61
CASC4-204ENST00000557945 NEDD1Q8NHV4 660 aa25.13■■□□□ 1.61
CASC4-204ENST00000557945 CCDC102AQ96A19 550 aa25.13■■□□□ 1.61
CASC4-204ENST00000557945 WNK4Q96J92 1243 aa25.13■■□□□ 1.61
CASC4-204ENST00000557945 KDM4AO75164 1064 aa25.12■■□□□ 1.61
CASC4-204ENST00000557945 GUCY1A2P33402 732 aa25.12■■□□□ 1.61
CASC4-204ENST00000557945 PPATQ06203 517 aa25.12■■□□□ 1.61
CASC4-204ENST00000557945 NCOA7Q8NI08 942 aa25.12■■□□□ 1.61
CASC4-204ENST00000557945 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.12■■□□□ 1.61
CASC4-204ENST00000557945 AS3MTQ9HBK9 375 aa25.12■■□□□ 1.61
CASC4-204ENST00000557945 ATAD5Q96QE3 1844 aa25.12■■□□□ 1.61
CASC4-204ENST00000557945 SLC10A3P09131 477 aa25.11■■□□□ 1.61
CASC4-204ENST00000557945 NKX2-3Q8TAU0 364 aa25.11■■□□□ 1.61
CASC4-204ENST00000557945 GJA5P36382 358 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 ATP2B2Q01814 1243 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 ICA1Q05084 483 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 PPIL2Q13356 520 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 KRT32Q14532 448 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 SPRYD7Q5W111 196 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 CLEC10AQ8IUN9 316 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 KCNB2Q92953 911 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 CAPNS2Q96L46 248 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 KANSL2Q9H9L4 492 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 SNX14Q9Y5W7 946 aa25.1■■□□□ 1.61
CASC4-204ENST00000557945 ECE1P42892 770 aa25.09■■□□□ 1.61
CASC4-204ENST00000557945 NT5C2P49902 561 aa25.09■■□□□ 1.61
CASC4-204ENST00000557945 SPP2Q13103 211 aa25.09■■□□□ 1.61
CASC4-204ENST00000557945 TSGA10IPQ3SY00 556 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms