RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 INPP5BP32019 993 aa9.68□□□□□ -0.86
SHC4-204ENST00000557797 SNRPNP63162 240 aaKnown RBP9.68□□□□□ -0.86
SHC4-204ENST00000557797 SOGA3Q5TF21 947 aa9.68□□□□□ -0.86
SHC4-204ENST00000557797 AEBP1Q8IUX7 1158 aa9.68□□□□□ -0.86
SHC4-204ENST00000557797 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.68□□□□□ -0.86
SHC4-204ENST00000557797 SOS1Q07889 1333 aaPredicted RBP9.67□□□□□ -0.86
SHC4-204ENST00000557797 ATP2B4P23634 1241 aa9.67□□□□□ -0.86
SHC4-204ENST00000557797 IDH3AP50213 366 aa9.67□□□□□ -0.86
SHC4-204ENST00000557797 GRM1Q13255 1194 aa9.67□□□□□ -0.86
SHC4-204ENST00000557797 FAM26DQ5JW98 314 aa9.67□□□□□ -0.86
SHC4-204ENST00000557797 NARFQ9UHQ1 456 aa9.67□□□□□ -0.86
SHC4-204ENST00000557797 HTTP42858 3142 aa9.67□□□□□ -0.86
SHC4-204ENST00000557797 RNF123Q5XPI4 1314 aa9.66□□□□□ -0.86
SHC4-204ENST00000557797 SIN3BO75182 1162 aa9.66□□□□□ -0.86
SHC4-204ENST00000557797 FXR1P51114 621 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHC4-204ENST00000557797 SAPCD2Q86UD0 394 aa9.66□□□□□ -0.86
SHC4-204ENST00000557797 ZNF622Q969S3 477 aaKnown RBP eCLIP9.66□□□□□ -0.86
SHC4-204ENST00000557797 IFT43Q96FT9 208 aa9.66□□□□□ -0.86
SHC4-204ENST00000557797 SCARF2Q96GP6 870 aaPredicted RBP9.66□□□□□ -0.86
SHC4-204ENST00000557797 BTBD6Q96KE9 485 aa9.66□□□□□ -0.86
SHC4-204ENST00000557797 BRIP1Q9BX63 1249 aa9.66□□□□□ -0.86
SHC4-204ENST00000557797 RANBP2P49792 3224 aaKnown RBP9.66□□□□□ -0.86
SHC4-204ENST00000557797 BCORQ6W2J9 1755 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 CENPFP49454 3210 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 CARNS1A5YM72 827 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 TNFRSF10BO14763 440 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 OPLAHO14841 1288 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 FYB1O15117 783 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 MICAL2O94851 1124 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 PDE6BP35913 854 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 FMR1Q06787 632 aaKnown RBP eCLIP9.65□□□□□ -0.86
SHC4-204ENST00000557797 CIAPIN1Q6FI81 312 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 C16orf46Q6P387 395 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 GPC2Q8N158 579 aa9.65□□□□□ -0.86
SHC4-204ENST00000557797 KIF20BQ96Q89 1820 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 RNF225M0QZC1 329 aaPredicted RBP9.64□□□□□ -0.87
SHC4-204ENST00000557797 FZD9O00144 591 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 DLL1O00548 723 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 PTCD1O75127 700 aaKnown RBP9.64□□□□□ -0.87
SHC4-204ENST00000557797 HSP90AB1P08238 724 aaKnown RBP9.64□□□□□ -0.87
SHC4-204ENST00000557797 IRS1P35568 1242 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 SCNN1AP37088 669 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 NAA30Q147X3 362 aaPredicted RBP9.64□□□□□ -0.87
SHC4-204ENST00000557797 PRPF40BQ6NWY9 871 aaKnown RBP9.64□□□□□ -0.87
SHC4-204ENST00000557797 ETFBKMTQ8IXQ9 262 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 TNFRSF25Q93038 417 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 GSX2Q9BZM3 304 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 SAGE1Q9NXZ1 904 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 CEP290O15078 2479 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 TRIOBPQ9H2D6 2365 aa9.64□□□□□ -0.87
SHC4-204ENST00000557797 COL15A1P39059 1388 aa9.63□□□□□ -0.87
SHC4-204ENST00000557797 BRCA2P51587 3418 aa9.63□□□□□ -0.87
SHC4-204ENST00000557797 ELOA3CA0A087WX78 387 aaPredicted RBP9.63□□□□□ -0.87
SHC4-204ENST00000557797 ELOA3DA6NLF2 546 aaPredicted RBP9.63□□□□□ -0.87
SHC4-204ENST00000557797 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
SHC4-204ENST00000557797 ARSDP51689 593 aa9.63□□□□□ -0.87
SHC4-204ENST00000557797 ELOA3BQ3SY89 546 aa9.63□□□□□ -0.87
SHC4-204ENST00000557797 STYK1Q6J9G0 422 aa9.63□□□□□ -0.87
SHC4-204ENST00000557797 CHSY3Q70JA7 882 aa9.63□□□□□ -0.87
SHC4-204ENST00000557797 TREML1Q86YW5 311 aa9.63□□□□□ -0.87
SHC4-204ENST00000557797 ELOA3Q8NG57 546 aa9.63□□□□□ -0.87
SHC4-204ENST00000557797 SEPT3Q9UH03 358 aa9.63□□□□□ -0.87
SHC4-204ENST00000557797 TRAF5O00463 557 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 SRGNP10124 158 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 AMPD1P23109 780 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 DGKGP49619 791 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 CABP4P57796 275 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 FKBP4Q02790 459 aaKnown RBP eCLIP9.62□□□□□ -0.87
SHC4-204ENST00000557797 NOGQ13253 232 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 LINC00114Q6XXX2 140 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 BHMTQ93088 406 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 GGNBP2Q9H3C7 697 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 USP20Q9Y2K6 914 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 AKAP11Q9UKA4 1901 aa9.62□□□□□ -0.87
SHC4-204ENST00000557797 SCN7AQ01118 1682 aa9.61□□□□□ -0.87
SHC4-204ENST00000557797 CCDC93Q567U6 631 aa9.61□□□□□ -0.87
SHC4-204ENST00000557797 PRR5LQ6MZQ0 368 aa9.61□□□□□ -0.87
SHC4-204ENST00000557797 USP50Q70EL3 339 aaPredicted RBP9.61□□□□□ -0.87
SHC4-204ENST00000557797 CTU1Q7Z7A3 348 aaKnown RBP9.61□□□□□ -0.87
SHC4-204ENST00000557797 BEND7Q8N7W2 519 aaPredicted RBP9.61□□□□□ -0.87
SHC4-204ENST00000557797 SCN11AQ9UI33 1791 aa9.6□□□□□ -0.87
SHC4-204ENST00000557797 WASHC2AQ641Q2 1341 aa9.6□□□□□ -0.87
SHC4-204ENST00000557797 CYP19A1P11511 503 aaPredicted RBP9.6□□□□□ -0.87
SHC4-204ENST00000557797 EPB42P16452 691 aa9.6□□□□□ -0.87
SHC4-204ENST00000557797 CCINQ13939 588 aa9.6□□□□□ -0.87
SHC4-204ENST00000557797 PHLDB3Q6NSJ2 640 aa9.6□□□□□ -0.87
SHC4-204ENST00000557797 PODNQ7Z5L7 613 aa9.6□□□□□ -0.87
SHC4-204ENST00000557797 MASTLQ96GX5 879 aa9.6□□□□□ -0.87
SHC4-204ENST00000557797 ZNF277Q9NRM2 450 aaPredicted RBP9.6□□□□□ -0.87
SHC4-204ENST00000557797 PATL2C9JE40 543 aaKnown RBP9.59□□□□□ -0.87
SHC4-204ENST00000557797 BRD2P25440 801 aaKnown RBP9.59□□□□□ -0.87
SHC4-204ENST00000557797 NEUROD1Q13562 356 aa9.59□□□□□ -0.87
SHC4-204ENST00000557797 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
SHC4-204ENST00000557797 DNAJC10Q8IXB1 793 aa9.59□□□□□ -0.87
SHC4-204ENST00000557797 MKL2Q9ULH7 1088 aa9.59□□□□□ -0.87
SHC4-204ENST00000557797 STARD13Q9Y3M8 1113 aa9.59□□□□□ -0.87
SHC4-204ENST00000557797 UNC80Q8N2C7 3258 aa9.58□□□□□ -0.88
SHC4-204ENST00000557797 PHF20L1A8MW92 1017 aa9.58□□□□□ -0.88
SHC4-204ENST00000557797 CELF2O95319 508 aaKnown RBP9.58□□□□□ -0.88
SHC4-204ENST00000557797 GDF11O95390 407 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms