RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 GUCY1A2P33402 732 aa13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 RAD51AP2Q09MP3 1159 aa13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 SPATA1Q5VX52 437 aa13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 IGSF22Q8N9C0 903 aa13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 IRX2Q9BZI1 471 aaPredicted RBP13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 KRT23Q9C075 422 aa13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 PCDHB6Q9Y5E3 794 aa13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 LRP6O75581 1613 aa13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 TCRBV5S4A2TA0A5A2 114 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 TEX33O43247 280 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 DEXIO95424 95 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 UQCRFS1P1P0C7P4 283 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 CAPN2P17655 700 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 ITGA6P23229 1130 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 RAD9BQ6WBX8 426 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 IFNL3Q8IZI9 196 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 CTAGE1Q96RT6 745 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 ZSWIM4Q9H7M6 989 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 INCENPQ9NQS7 918 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 CWC15Q9P013 229 aaKnown RBP13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 ANKRD18BA2A2Z9 1011 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 ERLIN1O75477 346 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 CTDSPL2Q05D32 466 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 RBL2Q08999 1139 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 FILIP1LQ4L180 1135 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 ADAM21Q9UKJ8 722 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 SYNRGQ9UMZ2 1314 aa13.45□□□□□ -0.26
VIPAS39-211ENST00000557658 CCDC196A0A1B0GTZ2 297 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 ZSCAN26Q16670 478 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 AKNAD1Q5T1N1 836 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 HDXQ7Z353 690 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 TRERF1Q96PN7 1200 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 CSRNP2Q9H175 543 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 PUF60Q9UHX1 559 aaKnown RBP13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 WDR17Q8IZU2 1322 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 CDHR2Q9BYE9 1310 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 ATP2B1P20020 1258 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 ARID4AP29374 1257 aaPredicted RBP13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 USP5P45974 858 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 NR5A1Q13285 461 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 WTAPQ15007 396 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 KIF4BQ2VIQ3 1234 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 MFSD6Q6ZSS7 791 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 RASGRP2Q7LDG7 609 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 APTXQ7Z2E3 356 aaKnown RBP13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 MSANTD4Q8NCY6 345 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 CPLX3Q8WVH0 158 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 DDX17Q92841 729 aaKnown RBP13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 CCDC51Q96ER9 411 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 ANKZF1Q9H8Y5 726 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 EPB41L4AQ9HCS5 686 aaPredicted RBP13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 RAB21Q9UL25 225 aa13.44□□□□□ -0.26
VIPAS39-211ENST00000557658 ERICH2A1L162 156 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 CTAGE9A4FU28 777 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 H3BQF6 201 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 SEMA3EO15041 775 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 MFAP3LO75121 409 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 EIF3JO75822 258 aaKnown RBP13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 PBX1P40424 430 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 PHKA1P46020 1223 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 ZNF569Q5MCW4 686 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 CNGA4Q8IV77 575 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 CRACR2BQ8N4Y2 399 aaPredicted RBP13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 VGLL2Q8N8G2 317 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 GOLGA5Q8TBA6 731 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 GREM2Q9H772 168 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 SEC31BQ9NQW1 1179 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 AATFQ9NY61 560 aaKnown RBP eCLIP13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 ADD3Q9UEY8 706 aaKnown RBP13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 TTF2Q9UNY4 1162 aaKnown RBP13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 TNS2Q63HR2 1409 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 MYH6P13533 1939 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 MBD4O95243 580 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 PDE8BO95263 885 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 LMAN1P49257 510 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 BEND6Q5SZJ8 279 aaPredicted RBP13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 KLHL10Q6JEL2 608 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 USP49Q70CQ1 688 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 MSL3Q8N5Y2 521 aaKnown RBP13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 STRN4Q9NRL3 753 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 TIAM2Q8IVF5 1701 aa13.43□□□□□ -0.26
VIPAS39-211ENST00000557658 TNS3Q68CZ2 1445 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 ATF3P18847 181 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 CUL4BQ13620 913 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 RRP12Q5JTH9 1297 aaKnown RBP13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 CDKAL1Q5VV42 579 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 TMTC2Q8N394 836 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 CABP5Q9NP86 173 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 TOMM22Q9NS69 142 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 MYH3P11055 1940 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 TRIM75PA6NK02 468 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 RCAN1P53805 252 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 GYS2P54840 703 aa13.42□□□□□ -0.26
VIPAS39-211ENST00000557658 CTSWP56202 376 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms