RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 PRMT6Q96LA8 375 aaPredicted RBP12.04□□□□□ -0.48
GABRB3-212ENST00000557641 TCEANC2Q96MN5 208 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 UBAC1Q9BSL1 405 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 MKNK2Q9HBH9 465 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 CHMP5Q9NZZ3 219 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 TPCN1Q9ULQ1 816 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 TACC3Q9Y6A5 838 aa12.04□□□□□ -0.48
GABRB3-212ENST00000557641 ZNF646O15015 1829 aaPredicted RBP12.04□□□□□ -0.48
GABRB3-212ENST00000557641 DHX16O60231 1041 aaKnown RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 RANBP6O60518 1105 aaKnown RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 PFKFB2O60825 505 aa12.03□□□□□ -0.48
GABRB3-212ENST00000557641 CYP2D6P10635 497 aa12.03□□□□□ -0.48
GABRB3-212ENST00000557641 PLCD1P51178 756 aa12.03□□□□□ -0.48
GABRB3-212ENST00000557641 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 COL9A3Q14050 684 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 ME3Q16798 604 aa12.03□□□□□ -0.48
GABRB3-212ENST00000557641 TMEM67Q5HYA8 995 aa12.03□□□□□ -0.48
GABRB3-212ENST00000557641 SYNE3Q6ZMZ3 975 aa12.03□□□□□ -0.48
GABRB3-212ENST00000557641 FOXP4Q8IVH2 680 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 ZNF444Q8N0Y2 327 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 LLPHQ9BRT6 129 aaKnown RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 SLKQ9H2G2 1235 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 TDRD3Q9H7E2 651 aaKnown RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 MYOZ2Q9NPC6 264 aa12.03□□□□□ -0.48
GABRB3-212ENST00000557641 DDX4Q9NQI0 724 aaKnown RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 TCP11L1Q9NUJ3 509 aa12.03□□□□□ -0.48
GABRB3-212ENST00000557641 PI4KBQ9UBF8 816 aa12.03□□□□□ -0.48
GABRB3-212ENST00000557641 ZNF70Q9UC06 446 aaPredicted RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 SAP30BPQ9UHR5 308 aaKnown RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 SERPINB13Q9UIV8 391 aa12.03□□□□□ -0.48
GABRB3-212ENST00000557641 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
GABRB3-212ENST00000557641 TSPY2A6NKD2 308 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 H7C1D1 291 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 YBX3P16989 372 aaKnown RBP eCLIP12.02□□□□□ -0.49
GABRB3-212ENST00000557641 DDIT3P35638 169 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 TNNI2P48788 182 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 CDK8P49336 464 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 GMPSP49915 693 aaPredicted RBP12.02□□□□□ -0.49
GABRB3-212ENST00000557641 GABPAQ06546 454 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 APOBRQ0VD83 1088 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 WTAPQ15007 396 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 PPP2R5BQ15173 497 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 PPP4R3BQ5MIZ7 849 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 CHST3Q7LGC8 479 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 FAM83AQ86UY5 434 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 FAM151AQ8WW52 585 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 ZSCAN10Q96SZ4 725 aaPredicted RBP12.02□□□□□ -0.49
GABRB3-212ENST00000557641 LRRC2Q9BYS8 371 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 INCENPQ9NQS7 918 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 FAM198AQ9UFP1 575 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 CNOT7Q9UIV1 285 aaKnown RBP12.02□□□□□ -0.49
GABRB3-212ENST00000557641 GJA3Q9Y6H8 435 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 ATRNL1Q5VV63 1379 aa12.02□□□□□ -0.49
GABRB3-212ENST00000557641 KLF18A0A0U1RQI7 1052 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 CCDC69A6NI79 296 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 PDIA3P30101 505 aaKnown RBP12.01□□□□□ -0.49
GABRB3-212ENST00000557641 NUCB2P80303 420 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 NFIAQ12857 509 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 TNFAIP1Q13829 316 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 GPR162Q16538 588 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 NFXL1Q6ZNB6 911 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 METTL16Q86W50 562 aaKnown RBP12.01□□□□□ -0.49
GABRB3-212ENST00000557641 DGKHQ86XP1 1220 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 GTF3C6Q969F1 213 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 CCDC17Q96LX7 622 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 LY9Q9HBG7 655 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 RNF181Q9P0P0 153 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 SMC3Q9UQE7 1217 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
GABRB3-212ENST00000557641 ZNF541Q9H0D2 1346 aa12.01□□□□□ -0.49
GABRB3-212ENST00000557641 WNT10BO00744 389 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 PRDM1O75626 825 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 LARGE1O95461 756 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 TSPY3P0CV98 308 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 TSPY8P0CW00 308 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 CALM1P0DP23 149 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 CALM2P0DP24 149 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 CALM3P0DP25 149 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 RASA1P20936 1047 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 TFAP4Q01664 338 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 SEC23AQ15436 765 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 CPLX2Q6PUV4 134 aaKnown RBP12□□□□□ -0.49
GABRB3-212ENST00000557641 CCDC83Q8IWF9 413 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 ZSCAN29Q8IWY8 852 aaPredicted RBP12□□□□□ -0.49
GABRB3-212ENST00000557641 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 NEDD1Q8NHV4 660 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 ANKS1AQ92625 1134 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 DYNLL2Q96FJ2 89 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
GABRB3-212ENST00000557641 TRIM34Q9BYJ4 488 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 HERC5Q9UII4 1024 aaKnown RBP12□□□□□ -0.49
GABRB3-212ENST00000557641 KIF3AQ9Y496 699 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 PCDHAC2Q9Y5I4 1007 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 SLC12A7Q9Y666 1083 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 TNKSO95271 1327 aa12□□□□□ -0.49
GABRB3-212ENST00000557641 DDX60LQ5H9U9 1706 aaKnown RBP12□□□□□ -0.49
GABRB3-212ENST00000557641 CCDC196A0A1B0GTZ2 297 aa11.99□□□□□ -0.49
GABRB3-212ENST00000557641 GOLGA8BA8MQT2 603 aa11.99□□□□□ -0.49
GABRB3-212ENST00000557641 ZBTB43O43298 467 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms