RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	GSTO1	P78417	241 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SPP2	Q13103	211 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	METTL16	Q86W50	562 aa	Known RBP	13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	TEX11	Q8IYF3	940 aa		13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	TLR7	Q9NYK1	1049 aa	Known RBP	13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	NOP58	Q9Y2X3	529 aa	Known RBP	13.74	□□□□□ -0.21
HNRNPC-231	ENST00000557336	ELN	P15502	786 aa		13.73	□□□□□ -0.21
HNRNPC-231	ENST00000557336	FXR1	P51114	621 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
HNRNPC-231	ENST00000557336	PDCD7	Q8N8D1	485 aa	Known RBP	13.73	□□□□□ -0.21
HNRNPC-231	ENST00000557336	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.73	□□□□□ -0.21
HNRNPC-231	ENST00000557336	UNC93B1	Q9H1C4	597 aa		13.73	□□□□□ -0.21
HNRNPC-231	ENST00000557336	PIH1D3	Q9NQM4	214 aa	Known RBP	13.73	□□□□□ -0.21
HNRNPC-231	ENST00000557336	LRP2BP	Q9P2M1	347 aa		13.73	□□□□□ -0.21
HNRNPC-231	ENST00000557336	DBNL	Q9UJU6	430 aa	Known RBP	13.73	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SIPA1L1	O43166	1804 aa		13.73	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SURF6	O75683	361 aa	Known RBP	13.72	□□□□□ -0.21
HNRNPC-231	ENST00000557336	ZAP70	P43403	619 aa		13.72	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SH3D19	Q5HYK7	790 aa		13.72	□□□□□ -0.21
HNRNPC-231	ENST00000557336	HS6ST3	Q8IZP7	471 aa		13.72	□□□□□ -0.21
HNRNPC-231	ENST00000557336	ANKRD13C	Q8N6S4	541 aa		13.72	□□□□□ -0.21
HNRNPC-231	ENST00000557336	ZNF280C	Q8ND82	737 aa		13.72	□□□□□ -0.21
HNRNPC-231	ENST00000557336	EAF2	Q96CJ1	260 aa	Predicted RBP	13.72	□□□□□ -0.21
HNRNPC-231	ENST00000557336	RNF208	Q9H0X6	261 aa		13.72	□□□□□ -0.21
HNRNPC-231	ENST00000557336	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
HNRNPC-231	ENST00000557336	DOCK3	Q8IZD9	2030 aa		13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	ADCY3	O60266	1144 aa		13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SEC24B	O95487	1268 aa		13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	HMGCS2	P54868	508 aa		13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	IRF5	Q13568	498 aa		13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	NAA16	Q6N069	864 aa	Predicted RBP	13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	POTEE	Q6S8J3	1075 aa		13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	SLAIN1	Q8ND83	568 aa		13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	TGFBRAP1	Q8WUH2	860 aa		13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	HERC5	Q9UII4	1024 aa	Known RBP	13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	TAOK2	Q9UL54	1235 aa		13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	MGAM	O43451	1857 aa		13.71	□□□□□ -0.21
HNRNPC-231	ENST00000557336	FLT1	P17948	1338 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	USP17L5	A8MUK1	530 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	TNPO2	O14787	897 aa	Known RBP	13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	PEX10	O60683	326 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	INHA	P05111	366 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	DYNLL1	P63167	89 aa	Known RBP	13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	FAM110C	Q1W6H9	321 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	TTC39A	Q5SRH9	613 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	LHX8	Q68G74	356 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	MAPKAPK5	Q8IW41	473 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	PXYLP1	Q8TE99	480 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	U2AF1L4	Q8WU68	220 aa	Known RBP	13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	WDR18	Q9BV38	432 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	PI4KB	Q9UBF8	816 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	GJD2	Q9UKL4	321 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	PALD1	Q9ULE6	856 aa		13.7	□□□□□ -0.22
HNRNPC-231	ENST00000557336	LOC285556	D6RIA3	1793 aa		13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	SGPL1	O95470	568 aa		13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	CCDC158	Q5M9N0	1113 aa		13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	CEP85	Q6P2H3	762 aa		13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	NKX2-3	Q8TAU0	364 aa		13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	DHX36	Q9H2U1	1008 aa	Known RBP	13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	PRO3102	Q9H379	93 aa		13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	PAK6	Q9NQU5	681 aa	Predicted RBP	13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	BIN2	Q9UBW5	565 aa	Predicted RBP	13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	NDUFB9	Q9Y6M9	179 aa		13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.69	□□□□□ -0.22
HNRNPC-231	ENST00000557336	BAG3	O95817	575 aa		13.68	□□□□□ -0.22
HNRNPC-231	ENST00000557336	BACE1	P56817	501 aa		13.68	□□□□□ -0.22
HNRNPC-231	ENST00000557336	UBXN2A	P68543	259 aa		13.68	□□□□□ -0.22
HNRNPC-231	ENST00000557336	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.68	□□□□□ -0.22
HNRNPC-231	ENST00000557336	TBC1D2	Q9BYX2	928 aa		13.68	□□□□□ -0.22
HNRNPC-231	ENST00000557336	OCEL1	Q9H607	264 aa		13.68	□□□□□ -0.22
HNRNPC-231	ENST00000557336	ANTXR1	Q9H6X2	564 aa		13.68	□□□□□ -0.22
HNRNPC-231	ENST00000557336	MORF4L1	Q9UBU8	362 aa		13.68	□□□□□ -0.22
HNRNPC-231	ENST00000557336	GDF11	O95390	407 aa		13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	GCLC	P48506	637 aa	Predicted RBP	13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	TRIM32	Q13049	653 aa		13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	OS9	Q13438	667 aa	Predicted RBP	13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	MTMR2	Q13614	643 aa		13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	ITPRIP	Q8IWB1	547 aa		13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	P2RX7	Q99572	595 aa	Known RBP	13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	MFRP	Q9BY79	579 aa		13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	CRISPLD2	Q9H0B8	497 aa		13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	TXNRD2	Q9NNW7	524 aa		13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	SAP30BP	Q9UHR5	308 aa	Known RBP	13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	PNMA3	Q9UL41	463 aa		13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	DNAH12	Q6ZR08	3092 aa		13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	ATAD5	Q96QE3	1844 aa		13.67	□□□□□ -0.22
HNRNPC-231	ENST00000557336	MAST2	Q6P0Q8	1798 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336		A0A0C4DFX4	3053 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	CDK5RAP2	Q96SN8	1893 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	ASNS	P08243	561 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	PLCG2	P16885	1265 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	CYP7A1	P22680	504 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	HOXA7	P31268	230 aa	Predicted RBP	13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	PANK1	Q8TE04	598 aa		13.66	□□□□□ -0.22
HNRNPC-231	ENST00000557336	COA7	Q96BR5	231 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms