RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 BOLA2Q9H3K6 86 aa15.26■□□□□ 0.03
SNX6-207ENST00000556303 TMOD4Q9NZQ9 345 aa15.26■□□□□ 0.03
SNX6-207ENST00000556303 SAP30BPQ9UHR5 308 aaKnown RBP15.26■□□□□ 0.03
SNX6-207ENST00000556303 ZNF532Q9HCE3 1301 aa15.25■□□□□ 0.03
SNX6-207ENST00000556303 USP17L10C9JJH3 530 aa15.25■□□□□ 0.03
SNX6-207ENST00000556303 CTGFP29279 349 aa15.25■□□□□ 0.03
SNX6-207ENST00000556303 HMGCS2P54868 508 aa15.25■□□□□ 0.03
SNX6-207ENST00000556303 TREML2Q5T2D2 321 aa15.25■□□□□ 0.03
SNX6-207ENST00000556303 ZSCAN25Q6NSZ9 544 aa15.25■□□□□ 0.03
SNX6-207ENST00000556303 RAET1EQ8TD07 263 aa15.25■□□□□ 0.03
SNX6-207ENST00000556303 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.25■□□□□ 0.03
SNX6-207ENST00000556303 ZBTB21Q9ULJ3 1066 aa15.25■□□□□ 0.03
SNX6-207ENST00000556303 MYH1P12882 1939 aa15.25■□□□□ 0.03
SNX6-207ENST00000556303 SIPA1L1O43166 1804 aa15.24■□□□□ 0.03
SNX6-207ENST00000556303 ATAD5Q96QE3 1844 aa15.24■□□□□ 0.03
SNX6-207ENST00000556303 POLR3DP05423 398 aaPredicted RBP15.24■□□□□ 0.03
SNX6-207ENST00000556303 CAPN2P17655 700 aa15.24■□□□□ 0.03
SNX6-207ENST00000556303 ADD2P35612 726 aa15.24■□□□□ 0.03
SNX6-207ENST00000556303 UBE3CQ15386 1083 aa15.24■□□□□ 0.03
SNX6-207ENST00000556303 CCDC84Q86UT8 332 aaPredicted RBP15.24■□□□□ 0.03
SNX6-207ENST00000556303 GTF3C2Q8WUA4 911 aaPredicted RBP15.24■□□□□ 0.03
SNX6-207ENST00000556303 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
SNX6-207ENST00000556303 ATP8A2Q9NTI2 1148 aa15.24■□□□□ 0.03
SNX6-207ENST00000556303 ECHDC1Q9NTX5 307 aa15.24■□□□□ 0.03
SNX6-207ENST00000556303 RBBP6Q7Z6E9 1792 aaKnown RBP15.24■□□□□ 0.03
SNX6-207ENST00000556303 MYPNQ86TC9 1320 aa15.23■□□□□ 0.03
SNX6-207ENST00000556303 GDF11O95390 407 aa15.23■□□□□ 0.03
SNX6-207ENST00000556303 GRK4P32298 578 aa15.23■□□□□ 0.03
SNX6-207ENST00000556303 MTMR2Q13614 643 aa15.23■□□□□ 0.03
SNX6-207ENST00000556303 CERKLQ49MI3 558 aaPredicted RBP15.23■□□□□ 0.03
SNX6-207ENST00000556303 SLAIN1Q8ND83 568 aa15.23■□□□□ 0.03
SNX6-207ENST00000556303 CABP5Q9NP86 173 aa15.23■□□□□ 0.03
SNX6-207ENST00000556303 LOC285556D6RIA3 1793 aa15.23■□□□□ 0.03
SNX6-207ENST00000556303 POTEFA5A3E0 1075 aa15.22■□□□□ 0.03
SNX6-207ENST00000556303 GH2P01242 217 aa15.22■□□□□ 0.03
SNX6-207ENST00000556303 USP14P54578 494 aa15.22■□□□□ 0.03
SNX6-207ENST00000556303 GABPAQ06546 454 aa15.22■□□□□ 0.03
SNX6-207ENST00000556303 IRF5Q13568 498 aa15.22■□□□□ 0.03
SNX6-207ENST00000556303 USP17L2Q6R6M4 530 aa15.22■□□□□ 0.03
SNX6-207ENST00000556303 ANKRD13CQ8N6S4 541 aa15.22■□□□□ 0.03
SNX6-207ENST00000556303 NKX2-3Q8TAU0 364 aa15.22■□□□□ 0.03
SNX6-207ENST00000556303 PXYLP1Q8TE99 480 aa15.22■□□□□ 0.03
SNX6-207ENST00000556303 ASCC2Q9H1I8 757 aaPredicted RBP15.22■□□□□ 0.03
SNX6-207ENST00000556303 DCP1AQ9NPI6 582 aaPredicted RBP15.22■□□□□ 0.03
SNX6-207ENST00000556303 MCM9Q9NXL9 1143 aa15.22■□□□□ 0.03
SNX6-207ENST00000556303 TNPO2O14787 897 aaKnown RBP15.21■□□□□ 0.03
SNX6-207ENST00000556303 PLCD1P51178 756 aa15.21■□□□□ 0.03
SNX6-207ENST00000556303 RRP1P56182 461 aaKnown RBP15.21■□□□□ 0.03
SNX6-207ENST00000556303 UBXN2AP68543 259 aa15.21■□□□□ 0.03
SNX6-207ENST00000556303 IRX3P78415 501 aaPredicted RBP15.21■□□□□ 0.03
SNX6-207ENST00000556303 JAG1P78504 1218 aa15.21■□□□□ 0.03
SNX6-207ENST00000556303 AAMPQ13685 434 aa15.21■□□□□ 0.03
SNX6-207ENST00000556303 ABCB5Q2M3G0 1257 aa15.21■□□□□ 0.03
SNX6-207ENST00000556303 SLC4A8Q2Y0W8 1093 aa15.21■□□□□ 0.03
SNX6-207ENST00000556303 COA7Q96BR5 231 aa15.21■□□□□ 0.03
SNX6-207ENST00000556303 EDC3Q96F86 508 aaKnown RBP15.21■□□□□ 0.03
SNX6-207ENST00000556303 C12orf42Q96LP6 360 aa15.21■□□□□ 0.03
SNX6-207ENST00000556303 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
SNX6-207ENST00000556303 SWAP70Q9UH65 585 aa15.21■□□□□ 0.03
SNX6-207ENST00000556303 MGAMO43451 1857 aa15.2■□□□□ 0.02
SNX6-207ENST00000556303 SMARCA5O60264 1052 aaPredicted RBP15.2■□□□□ 0.02
SNX6-207ENST00000556303 SHMT1P34896 483 aa15.2■□□□□ 0.02
SNX6-207ENST00000556303 PRKCZQ05513 592 aa15.2■□□□□ 0.02
SNX6-207ENST00000556303 LRRFIP1Q32MZ4 808 aaKnown RBP15.2■□□□□ 0.02
SNX6-207ENST00000556303 PRPF38BQ5VTL8 546 aaKnown RBP15.2■□□□□ 0.02
SNX6-207ENST00000556303 AMOTL1Q8IY63 956 aa15.2■□□□□ 0.02
SNX6-207ENST00000556303 LCORLQ8N3X6 602 aa15.2■□□□□ 0.02
SNX6-207ENST00000556303 SH3TC2Q8TF17 1288 aa15.2■□□□□ 0.02
SNX6-207ENST00000556303 DDRGK1Q96HY6 314 aa15.2■□□□□ 0.02
SNX6-207ENST00000556303 KIAA1683Q9H0B3 1180 aa15.2■□□□□ 0.02
SNX6-207ENST00000556303 DOCK3Q8IZD9 2030 aa15.19■□□□□ 0.02
SNX6-207ENST00000556303 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
SNX6-207ENST00000556303 EN2P19622 333 aaPredicted RBP15.19■□□□□ 0.02
SNX6-207ENST00000556303 FLT3LGP49771 235 aa15.19■□□□□ 0.02
SNX6-207ENST00000556303 BCL11AQ9H165 835 aa15.19■□□□□ 0.02
SNX6-207ENST00000556303 EMILIN3Q9NT22 766 aa15.19■□□□□ 0.02
SNX6-207ENST00000556303 TTC41PQ6P2S7 1318 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 ZSWIM8A7E2V4 1837 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 ERC2O15083 957 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 MBD4O95243 580 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 HERVK_113P62684 666 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 RAB3GAP1Q15042 981 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 GIMAP6Q6P9H5 292 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 KBTBD3Q8NAB2 608 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 GPRC5AQ8NFJ5 357 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 SDR42E1Q8WUS8 393 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 P2RX7Q99572 595 aaKnown RBP15.18■□□□□ 0.02
SNX6-207ENST00000556303 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 GABRQQ9UN88 632 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 PCDHB15Q9Y5E8 787 aa15.18■□□□□ 0.02
SNX6-207ENST00000556303 USP17L15C9J2P7 530 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 USP17L13C9JLJ4 530 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 USP17L11C9JVI0 530 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 USP17L18D6R9N7 530 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 USP17L22D6RA61 530 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 USP17L17D6RBQ6 530 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 USP17L19D6RCP7 530 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 USP17L20D6RJB6 530 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 ADCY3O60266 1144 aa15.17■□□□□ 0.02
SNX6-207ENST00000556303 GJB1P08034 283 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms