RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 CHRDQ9H2X0 955 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 ZFYVE28Q9HCC9 887 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 JPH1Q9HDC5 661 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-237ENST00000556274 POLKQ9UBT6 870 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 MKL2Q9ULH7 1088 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 ITGB4P16144 1822 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 RGPD1P0DJD0 1748 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 PARP4Q9UKK3 1724 aaKnown RBP6.24□□□□□ -1.41
ATXN3-237ENST00000556274 OVOS2A0A0J9YW53 1432 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 OVOS2Q6IE36 1432 aa6.24□□□□□ -1.41
ATXN3-237ENST00000556274 SMG6Q86US8 1419 aaKnown RBP6.24□□□□□ -1.41
ATXN3-237ENST00000556274 GPR182O15218 404 aa6.23□□□□□ -1.41
ATXN3-237ENST00000556274 HOXB4P17483 251 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-237ENST00000556274 MTHFSP49914 203 aa6.23□□□□□ -1.41
ATXN3-237ENST00000556274 LINC00114Q6XXX2 140 aa6.23□□□□□ -1.41
ATXN3-237ENST00000556274 DEFB132Q7Z7B7 95 aa6.23□□□□□ -1.41
ATXN3-237ENST00000556274 ZCRB1Q8TBF4 217 aaKnown RBP6.23□□□□□ -1.41
ATXN3-237ENST00000556274 PLD4Q96BZ4 506 aa6.23□□□□□ -1.41
ATXN3-237ENST00000556274 LPIN3Q9BQK8 851 aa6.23□□□□□ -1.41
ATXN3-237ENST00000556274 FRRS1LQ9P0K9 344 aa6.23□□□□□ -1.41
ATXN3-237ENST00000556274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-237ENST00000556274 PIK3R2O00459 728 aa6.22□□□□□ -1.41
ATXN3-237ENST00000556274 U2SURPO15042 1029 aaKnown RBP6.22□□□□□ -1.41
ATXN3-237ENST00000556274 KIF4AO95239 1232 aa6.22□□□□□ -1.41
ATXN3-237ENST00000556274 POLR3DP05423 398 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-237ENST00000556274 PLCB3Q01970 1234 aa6.22□□□□□ -1.41
ATXN3-237ENST00000556274 ORC1Q13415 861 aa6.22□□□□□ -1.41
ATXN3-237ENST00000556274 MARCH10Q8NA82 808 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-237ENST00000556274 SALL4Q9UJQ4 1053 aa6.22□□□□□ -1.41
ATXN3-237ENST00000556274 BLMP54132 1417 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-237ENST00000556274 FLT4P35916 1363 aa6.21□□□□□ -1.41
ATXN3-237ENST00000556274 THSD7AQ9UPZ6 1657 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 BTBD11A6QL63 1104 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 GNB5O14775 395 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 CPNE3O75131 537 aaKnown RBP6.21□□□□□ -1.42
ATXN3-237ENST00000556274 IGHA2P01877 340 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 EDN3P14138 238 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 ATP11AP98196 1134 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 EIF4A2Q14240 407 aaKnown RBP6.21□□□□□ -1.42
ATXN3-237ENST00000556274 CEP120Q8N960 986 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 CFAP53Q96M91 514 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 ASB16Q96NS5 453 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 PRDM6Q9NQX0 595 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 LRRC37A3O60309 1634 aa6.21□□□□□ -1.42
ATXN3-237ENST00000556274 BTAF1O14981 1849 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 NSD2O96028 1365 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 INSRP06213 1382 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 KRBA1A5PL33 1030 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 EIF1AYO14602 144 aaKnown RBP6.2□□□□□ -1.42
ATXN3-237ENST00000556274 TREHO43280 583 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 DIAPH1O60610 1272 aaKnown RBP6.2□□□□□ -1.42
ATXN3-237ENST00000556274 SMNDC1O75940 238 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATXN3-237ENST00000556274 HMOX1P09601 288 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 AFF1P51825 1210 aaKnown RBP6.2□□□□□ -1.42
ATXN3-237ENST00000556274 CEP135Q66GS9 1140 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 SULT6B1Q6IMI4 303 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 GDF6Q6KF10 455 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-237ENST00000556274 TTC9Q92623 222 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 ALKBH8Q96BT7 664 aaKnown RBP6.2□□□□□ -1.42
ATXN3-237ENST00000556274 PLVAPQ9BX97 442 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 PBX4Q9BYU1 374 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 RASSF4Q9H2L5 321 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 SPG7Q9UQ90 795 aa6.2□□□□□ -1.42
ATXN3-237ENST00000556274 DLG5Q8TDM6 1919 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 KCNQ2O43526 872 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 TRPA1O75762 1119 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 ACPPP15309 386 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 EZH2Q15910 746 aaKnown RBP6.19□□□□□ -1.42
ATXN3-237ENST00000556274 CCDC27Q2M243 656 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 PLEKHO1Q53GL0 409 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-237ENST00000556274 USPL1Q5W0Q7 1092 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 MPRIPQ6WCQ1 1025 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 PTF1AQ7RTS3 328 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 TRIM11Q96F44 468 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 CSRNP1Q96S65 589 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 OSMRQ99650 979 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 TRIM33Q9UPN9 1127 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 ABCC6O95255 1503 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 DOT1LQ8TEK3 1739 aa6.19□□□□□ -1.42
ATXN3-237ENST00000556274 TNS1Q9HBL0 1735 aaKnown RBP6.19□□□□□ -1.42
ATXN3-237ENST00000556274 RTL1A6NKG5 1358 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 NID1P14543 1247 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 ITGB7P26010 798 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 PPP2R1AP30153 589 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 MAPK8P45983 427 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 COL9A3Q14050 684 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-237ENST00000556274 DSC3Q14574 896 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 GRIK5Q16478 980 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 TRAPPC3LQ5T215 181 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 WFDC8Q8IUA0 241 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 GALNT12Q8IXK2 581 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 DMRTC2Q8IXT2 367 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-237ENST00000556274 LACRTQ9GZZ8 138 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 DNAJC25Q9H1X3 360 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 SUV39H2Q9H5I1 410 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 LATS2Q9NRM7 1088 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 DZANK1Q9NVP4 752 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 NUDCQ9Y266 331 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 SHANK3Q9BYB0 1731 aa6.18□□□□□ -1.42
ATXN3-237ENST00000556274 OVOS2A0A0G2JMS6 1433 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms