RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SMIM5Q71RC9 77 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 CCDC83Q8IWF9 413 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 NPAS3Q8IXF0 933 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 ZNF274Q96GC6 653 aaPredicted RBP9.8□□□□□ -0.84
ATXN3-235ENST00000556082 CDK15Q96Q40 435 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 LMBRD1Q9NUN5 540 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 DENND2AQ9ULE3 1009 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 ATP6V1DQ9Y5K8 247 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 PNPLA7Q6ZV29 1317 aa9.8□□□□□ -0.84
ATXN3-235ENST00000556082 TAF1LQ8IZX4 1826 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 KLRG2A4D1S0 409 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-235ENST00000556082 PATL2C9JE40 543 aaKnown RBP9.79□□□□□ -0.84
ATXN3-235ENST00000556082 SNAP23O00161 211 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 ZNF213O14771 459 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 WIPF1O43516 503 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 GYS1P13807 737 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 GJB2P29033 226 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 COL9A3Q14050 684 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-235ENST00000556082 CRY2Q49AN0 593 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 MCTP1Q6DN14 999 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 TTLL5Q6EMB2 1281 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 C15orf52Q6ZUT6 534 aaKnown RBP9.79□□□□□ -0.84
ATXN3-235ENST00000556082 BPHLQ86WA6 291 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-235ENST00000556082 TMEM87AQ8NBN3 555 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 GTF3C6Q969F1 213 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 FAM84BQ96KN1 310 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-235ENST00000556082 SLC24A3Q9HC58 644 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 WWC3Q9ULE0 1092 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 LEMD3Q9Y2U8 911 aa9.79□□□□□ -0.84
ATXN3-235ENST00000556082 FSD2A1L4K1 749 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 TRIM37O94972 964 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 HOXA10P31260 410 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-235ENST00000556082 MCM5P33992 734 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 NNTQ13423 1086 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 GRAPQ13588 217 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 TXNRD1Q16881 649 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 MAGEB6Q8N7X4 407 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 NECAB1Q8N987 351 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 CNBD1Q8NA66 436 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 RGS22Q8NE09 1264 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 NCOA7Q8NI08 942 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 GRAPLQ8TC17 118 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-235ENST00000556082 AIDAQ96BJ3 306 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 MTMR6Q9Y217 621 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 IRS2Q9Y4H2 1338 aa9.78□□□□□ -0.84
ATXN3-235ENST00000556082 BBOX1O75936 387 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 MBD3O95983 291 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 ADH1CP00326 375 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 GYG1P46976 350 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 PRR5LQ6MZQ0 368 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 MB21D2Q8IYB1 491 aaPredicted RBP9.77□□□□□ -0.85
ATXN3-235ENST00000556082 FLAD1Q8NFF5 587 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 SMARCC2Q8TAQ2 1214 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 SLC16A10Q8TF71 515 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 BRF1Q92994 677 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 TCEANC2Q96MN5 208 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 MTA3Q9BTC8 594 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 NACAP1Q9BZK3 213 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 LRP2BPQ9P2M1 347 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 LIMD1Q9UGP4 676 aa9.77□□□□□ -0.85
ATXN3-235ENST00000556082 A0A0G2JLW4 131 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 GSG1L2A8MUP6 293 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 PRPF40AO75400 957 aaKnown RBP9.76□□□□□ -0.85
ATXN3-235ENST00000556082 F13A1P00488 732 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 SERPINB2P05120 415 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 PDIA3P30101 505 aaKnown RBP9.76□□□□□ -0.85
ATXN3-235ENST00000556082 HIBADHP31937 336 aaKnown RBP9.76□□□□□ -0.85
ATXN3-235ENST00000556082 ST5P78524 1137 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 HMGN5P82970 282 aaKnown RBP9.76□□□□□ -0.85
ATXN3-235ENST00000556082 FGD1P98174 961 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 INSM1Q01101 510 aaPredicted RBP9.76□□□□□ -0.85
ATXN3-235ENST00000556082 NR5A1Q13285 461 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 L1TD1Q5T7N2 865 aaKnown RBP9.76□□□□□ -0.85
ATXN3-235ENST00000556082 LARP1BQ659C4 914 aaKnown RBP9.76□□□□□ -0.85
ATXN3-235ENST00000556082 GIMAP6Q6P9H5 292 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 TMC4Q7Z404 712 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 TRIM46Q7Z4K8 759 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 VPS37DQ86XT2 251 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 IFNL3Q8IZI9 196 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 NLGN1Q8N2Q7 840 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 MAP10Q9P2G4 905 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 KIF3AQ9Y496 699 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 TLL2Q9Y6L7 1015 aa9.76□□□□□ -0.85
ATXN3-235ENST00000556082 DDX49Q9Y6V7 483 aaKnown RBP9.76□□□□□ -0.85
ATXN3-235ENST00000556082 COL4A1P02462 1669 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 PRC1O43663 620 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 DHX16O60231 1041 aaKnown RBP9.75□□□□□ -0.85
ATXN3-235ENST00000556082 MBD4O95243 580 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 CLK2P49760 499 aaKnown RBP9.75□□□□□ -0.85
ATXN3-235ENST00000556082 SCRN1Q12765 414 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 TRDNQ13061 729 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 CSPP1Q1MSJ5 1256 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 RALYLQ86SE5 291 aaKnown RBP9.75□□□□□ -0.85
ATXN3-235ENST00000556082 GPKOWQ92917 476 aaPredicted RBP eCLIP9.75□□□□□ -0.85
ATXN3-235ENST00000556082 RBM17Q96I25 401 aaKnown RBP9.75□□□□□ -0.85
ATXN3-235ENST00000556082 TMEM87BQ96K49 555 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 CRAMP1Q96RY5 1269 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 CNNM2Q9H8M5 875 aa9.75□□□□□ -0.85
ATXN3-235ENST00000556082 NXF1Q9UBU9 619 aaKnown RBP9.75□□□□□ -0.85
ATXN3-235ENST00000556082 ANAPC4Q9UJX5 808 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms