RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 TTC13Q8NBP0 860 aa11.52□□□□□ -0.57
PRKCH-218ENST00000555628 SLC45A1Q9Y2W3 748 aa11.52□□□□□ -0.57
PRKCH-218ENST00000555628 CHMP3Q9Y3E7 222 aa11.52□□□□□ -0.57
PRKCH-218ENST00000555628 UTYO14607 1347 aa11.52□□□□□ -0.57
PRKCH-218ENST00000555628 VAMP4O75379 141 aa11.51□□□□□ -0.57
PRKCH-218ENST00000555628 FGFR2P21802 821 aa11.51□□□□□ -0.57
PRKCH-218ENST00000555628 BCAMP50895 628 aa11.51□□□□□ -0.57
PRKCH-218ENST00000555628 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
PRKCH-218ENST00000555628 RABL6Q3YEC7 729 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-218ENST00000555628 PRKRIP1Q9H875 184 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-218ENST00000555628 BIN2Q9UBW5 565 aaPredicted RBP11.51□□□□□ -0.57
PRKCH-218ENST00000555628 DAGLAQ9Y4D2 1042 aa11.51□□□□□ -0.57
PRKCH-218ENST00000555628 MROH5Q6ZUA9 1318 aa11.51□□□□□ -0.57
PRKCH-218ENST00000555628 FANCIQ9NVI1 1328 aa11.51□□□□□ -0.57
PRKCH-218ENST00000555628 MAGEA10P43363 369 aaPredicted RBP11.5□□□□□ -0.57
PRKCH-218ENST00000555628 CHAF1AQ13111 956 aaPredicted RBP11.5□□□□□ -0.57
PRKCH-218ENST00000555628 LRRC24Q50LG9 513 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 CDC42EP5Q6NZY7 148 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 THSD4Q6ZMP0 1018 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 LAPTM4BQ86VI4 370 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 ZFPM1Q8IX07 1006 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 ANKLE1Q8NAG6 615 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 TATDN2Q93075 761 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 SUCLG2Q96I99 432 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 ZFRQ96KR1 1074 aaKnown RBP11.5□□□□□ -0.57
PRKCH-218ENST00000555628 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRKCH-218ENST00000555628 TMOD2Q9NZR1 351 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 HCSTQ9UBK5 93 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 AFG3L2Q9Y4W6 797 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 MAST3O60307 1309 aa11.5□□□□□ -0.57
PRKCH-218ENST00000555628 MAST2Q6P0Q8 1798 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 TFRCP02786 760 aaKnown RBP11.49□□□□□ -0.57
PRKCH-218ENST00000555628 PTPRAP18433 802 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 NUDT18Q6ZVK8 323 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 NECAB2Q7Z6G3 386 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 C7orf61Q8IZ16 206 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 TDHQ8IZJ6 230 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 ANKRD44Q8N8A2 993 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 GUCD1Q96NT3 240 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 PNMA3Q9UL41 463 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
PRKCH-218ENST00000555628 PFASO15067 1338 aa11.49□□□□□ -0.57
PRKCH-218ENST00000555628 TNPO2O14787 897 aaKnown RBP11.48□□□□□ -0.57
PRKCH-218ENST00000555628 PDE8BO95263 885 aa11.48□□□□□ -0.57
PRKCH-218ENST00000555628 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
PRKCH-218ENST00000555628 DIXDC1Q155Q3 683 aa11.48□□□□□ -0.57
PRKCH-218ENST00000555628 SH3BP5LQ7L8J4 393 aa11.48□□□□□ -0.57
PRKCH-218ENST00000555628 SCYL3Q8IZE3 742 aa11.48□□□□□ -0.57
PRKCH-218ENST00000555628 GJD2Q9UKL4 321 aa11.48□□□□□ -0.57
PRKCH-218ENST00000555628 AK9Q5TCS8 1911 aa11.48□□□□□ -0.57
PRKCH-218ENST00000555628 FRMPD3Q5JV73 1810 aa11.47□□□□□ -0.57
PRKCH-218ENST00000555628 ALDH1L1O75891 902 aa11.47□□□□□ -0.57
PRKCH-218ENST00000555628 NBPF7P0C2Y1 421 aaPredicted RBP11.47□□□□□ -0.57
PRKCH-218ENST00000555628 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
PRKCH-218ENST00000555628 COL6A1P12109 1028 aa11.47□□□□□ -0.57
PRKCH-218ENST00000555628 TCP10Q12799 353 aa11.47□□□□□ -0.57
PRKCH-218ENST00000555628 TRIM32Q13049 653 aa11.47□□□□□ -0.57
PRKCH-218ENST00000555628 FAM110CQ1W6H9 321 aa11.47□□□□□ -0.57
PRKCH-218ENST00000555628 MAP3K21Q5TCX8 1036 aa11.47□□□□□ -0.57
PRKCH-218ENST00000555628 SMYD5Q6GMV2 418 aa11.47□□□□□ -0.57
PRKCH-218ENST00000555628 FASTKD5Q7L8L6 764 aaKnown RBP11.47□□□□□ -0.57
PRKCH-218ENST00000555628 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.47□□□□□ -0.57
PRKCH-218ENST00000555628 OGDHLQ9ULD0 1010 aa11.47□□□□□ -0.57
PRKCH-218ENST00000555628 LTBP2Q14767 1821 aa11.46□□□□□ -0.57
PRKCH-218ENST00000555628 HMGCRP04035 888 aa11.46□□□□□ -0.57
PRKCH-218ENST00000555628 SYN1P17600 705 aa11.46□□□□□ -0.57
PRKCH-218ENST00000555628 PRDX5P30044 214 aa11.46□□□□□ -0.57
PRKCH-218ENST00000555628 TREML2Q5T2D2 321 aa11.46□□□□□ -0.57
PRKCH-218ENST00000555628 FAM109BQ6ICB4 259 aaPredicted RBP11.46□□□□□ -0.57
PRKCH-218ENST00000555628 IDI2Q9BXS1 227 aa11.46□□□□□ -0.57
PRKCH-218ENST00000555628 BICC1Q9H694 974 aaKnown RBP11.46□□□□□ -0.57
PRKCH-218ENST00000555628 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.46□□□□□ -0.57
PRKCH-218ENST00000555628 AGTPBP1Q9UPW5 1226 aa11.46□□□□□ -0.57
PRKCH-218ENST00000555628 ZHX2Q9Y6X8 837 aa11.46□□□□□ -0.57
PRKCH-218ENST00000555628 MYH2Q9UKX2 1941 aa11.46□□□□□ -0.58
PRKCH-218ENST00000555628 GAKO14976 1311 aa11.45□□□□□ -0.58
PRKCH-218ENST00000555628 RPTORQ8N122 1335 aa11.45□□□□□ -0.58
PRKCH-218ENST00000555628 ATAD5Q96QE3 1844 aa11.45□□□□□ -0.58
PRKCH-218ENST00000555628 CAVIN4Q5BKX8 364 aa11.45□□□□□ -0.58
PRKCH-218ENST00000555628 METTL24Q5JXM2 366 aa11.45□□□□□ -0.58
PRKCH-218ENST00000555628 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
PRKCH-218ENST00000555628 SIPA1L1O43166 1804 aa11.44□□□□□ -0.58
PRKCH-218ENST00000555628 SALL1Q9NSC2 1324 aa11.44□□□□□ -0.58
PRKCH-218ENST00000555628 PUM3Q15397 648 aaKnown RBP11.44□□□□□ -0.58
PRKCH-218ENST00000555628 CCDC184Q52MB2 194 aa11.44□□□□□ -0.58
PRKCH-218ENST00000555628 ANKRD13CQ8N6S4 541 aa11.44□□□□□ -0.58
PRKCH-218ENST00000555628 ANKK1Q8NFD2 765 aa11.44□□□□□ -0.58
PRKCH-218ENST00000555628 KLHDC4Q8TBB5 520 aa11.44□□□□□ -0.58
PRKCH-218ENST00000555628 WDR66Q8TBY9 1149 aa11.44□□□□□ -0.58
PRKCH-218ENST00000555628 TRIB2Q92519 343 aa11.44□□□□□ -0.58
PRKCH-218ENST00000555628 C11orf49Q9H6J7 331 aa11.44□□□□□ -0.58
PRKCH-218ENST00000555628 SOWAHBA6NEL2 793 aa11.43□□□□□ -0.58
PRKCH-218ENST00000555628 DDTLA6NHG4 134 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-218ENST00000555628 ENTPD3O75355 529 aa11.43□□□□□ -0.58
PRKCH-218ENST00000555628 FECHP22830 423 aa11.43□□□□□ -0.58
PRKCH-218ENST00000555628 RFX5P48382 616 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-218ENST00000555628 RGS3P49796 1198 aa11.43□□□□□ -0.58
PRKCH-218ENST00000555628 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
PRKCH-218ENST00000555628 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms