RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SPECC1LQ69YQ0 1117 aa18.5■□□□□ 0.55
TUBB3-209ENST00000555609 LCORLQ8N3X6 602 aa18.5■□□□□ 0.55
TUBB3-209ENST00000555609 ESR2Q92731 530 aa18.5■□□□□ 0.55
TUBB3-209ENST00000555609 UBAC1Q9BSL1 405 aa18.5■□□□□ 0.55
TUBB3-209ENST00000555609 ARGLU1Q9NWB6 273 aaPredicted RBP18.5■□□□□ 0.55
TUBB3-209ENST00000555609 TACC3Q9Y6A5 838 aa18.5■□□□□ 0.55
TUBB3-209ENST00000555609 POLR2DO15514 142 aaKnown RBP18.49■□□□□ 0.55
TUBB3-209ENST00000555609 CDK11BP21127 795 aaKnown RBP18.49■□□□□ 0.55
TUBB3-209ENST00000555609 PLCD1P51178 756 aa18.49■□□□□ 0.55
TUBB3-209ENST00000555609 PPARAQ07869 468 aa18.49■□□□□ 0.55
TUBB3-209ENST00000555609 TMEM139Q8IV31 216 aa18.49■□□□□ 0.55
TUBB3-209ENST00000555609 HELBQ8NG08 1087 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-209ENST00000555609 RBM28Q9NW13 759 aaKnown RBP18.49■□□□□ 0.55
TUBB3-209ENST00000555609 SERTAD1Q9UHV2 236 aa18.49■□□□□ 0.55
TUBB3-209ENST00000555609 PLCH1Q4KWH8 1693 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 ATP8B1O43520 1251 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 ACTN4O43707 911 aaKnown RBP18.48■□□□□ 0.55
TUBB3-209ENST00000555609 CALM1P0DP23 149 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 CALM2P0DP24 149 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 CALM3P0DP25 149 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 GUCY1A2P33402 732 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 PDE4BQ07343 736 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 SUSD4Q5VX71 490 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 FERMT2Q96AC1 680 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 BAG1Q99933 345 aaPredicted RBP18.48■□□□□ 0.55
TUBB3-209ENST00000555609 INCENPQ9NQS7 918 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 BTG4Q9NY30 223 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 EFCAB8A8MWE9 144 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 SEMA3EO15041 775 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 PRPF3O43395 683 aaKnown RBP18.48■□□□□ 0.55
TUBB3-209ENST00000555609 SEC23AQ15436 765 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 PYM1Q9BRP8 204 aaKnown RBP18.48■□□□□ 0.55
TUBB3-209ENST00000555609 INTS13Q9NVM9 706 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 GNL3LQ9NVN8 582 aaKnown RBP18.48■□□□□ 0.55
TUBB3-209ENST00000555609 LRP2BPQ9P2M1 347 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 KCNJ14Q9UNX9 436 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 PPP2R2CQ9Y2T4 447 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 NFE2L3Q9Y4A8 694 aa18.48■□□□□ 0.55
TUBB3-209ENST00000555609 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
TUBB3-209ENST00000555609 TRIM75PA6NK02 468 aa18.47■□□□□ 0.55
TUBB3-209ENST00000555609 RRP12Q5JTH9 1297 aaKnown RBP18.47■□□□□ 0.55
TUBB3-209ENST00000555609 CDCA7Q9BWT1 371 aaPredicted RBP18.47■□□□□ 0.55
TUBB3-209ENST00000555609 NAA15Q9BXJ9 866 aaKnown RBP18.47■□□□□ 0.55
TUBB3-209ENST00000555609 TOMM22Q9NS69 142 aa18.47■□□□□ 0.55
TUBB3-209ENST00000555609 PRKAB2O43741 272 aa18.46■□□□□ 0.55
TUBB3-209ENST00000555609 NR1I3Q14994 352 aa18.46■□□□□ 0.55
TUBB3-209ENST00000555609 UBXN4Q92575 508 aa18.46■□□□□ 0.55
TUBB3-209ENST00000555609 BRMS1Q9HCU9 246 aa18.46■□□□□ 0.55
TUBB3-209ENST00000555609 CCDC87Q9NVE4 849 aa18.46■□□□□ 0.55
TUBB3-209ENST00000555609 PCDHB6Q9Y5E3 794 aa18.46■□□□□ 0.55
TUBB3-209ENST00000555609 TMEM232C9JQI7 657 aa18.46■□□□□ 0.54
TUBB3-209ENST00000555609 KRT2P35908 639 aa18.46■□□□□ 0.54
TUBB3-209ENST00000555609 ERCC6LQ2NKX8 1250 aa18.46■□□□□ 0.54
TUBB3-209ENST00000555609 MNS1Q8NEH6 495 aa18.46■□□□□ 0.54
TUBB3-209ENST00000555609 NGLY1Q96IV0 654 aa18.46■□□□□ 0.54
TUBB3-209ENST00000555609 PANX2Q96RD6 677 aa18.46■□□□□ 0.54
TUBB3-209ENST00000555609 CTAGE1Q96RT6 745 aa18.46■□□□□ 0.54
TUBB3-209ENST00000555609 RAI14Q9P0K7 980 aa18.46■□□□□ 0.54
TUBB3-209ENST00000555609 ZNF804BA4D1E1 1349 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 A0A1B0GTH6 734 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 FGRP09769 529 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 SLFN14P0C7P3 912 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 CYP7A1P22680 504 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 NT5C2P49902 561 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 BCAMP50895 628 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 SPATA1Q5VX52 437 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 SH3RF1Q7Z6J0 888 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 PHF20Q9BVI0 1012 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 BRIP1Q9BX63 1249 aa18.45■□□□□ 0.54
TUBB3-209ENST00000555609 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.45■□□□□ 0.54
TUBB3-209ENST00000555609 V9GYY5 206 aaPredicted RBP18.45■□□□□ 0.54
TUBB3-209ENST00000555609 SLIT2O94813 1529 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 MAGEB6P1A0A0J9YX57 407 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 VWA3AA6NCI4 1184 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 FOXN1O15353 648 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 CASQ1P31415 396 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 INTS5Q6P9B9 1019 aaKnown RBP18.44■□□□□ 0.54
TUBB3-209ENST00000555609 CATIPQ7Z7H3 387 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 TC2NQ8N9U0 490 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 GSDMAQ96QA5 445 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 CSRNP2Q9H175 543 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 CABP5Q9NP86 173 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 AFF2P51816 1311 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 LAMB2P55268 1798 aa18.44■□□□□ 0.54
TUBB3-209ENST00000555609 TADA3O75528 432 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 DDAH1O94760 285 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 FMR1Q06787 632 aaKnown RBP eCLIP18.43■□□□□ 0.54
TUBB3-209ENST00000555609 NUP133Q8WUM0 1156 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 ZSCAN10Q96SZ4 725 aaPredicted RBP18.43■□□□□ 0.54
TUBB3-209ENST00000555609 RGS17Q9UGC6 210 aaPredicted RBP18.43■□□□□ 0.54
TUBB3-209ENST00000555609 PARP3Q9Y6F1 533 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 TNKSO95271 1327 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 RREB1Q92766 1687 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 UBE2Q2LH0YL09 131 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 CAMTA2O94983 1202 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 PRR29P0C7W0 189 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 GRIN1Q05586 938 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 CHRNDQ07001 517 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 NR5A1Q13285 461 aa18.43■□□□□ 0.54
TUBB3-209ENST00000555609 TUBB2AQ13885 445 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms