RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 PABPC4Q13310 644 aaKnown RBP eCLIP23.55■■□□□ 1.36
CBLN3-202ENST00000555436 MTMR2Q13614 643 aa23.55■■□□□ 1.36
CBLN3-202ENST00000555436 TATDN1Q6P1N9 297 aa23.55■■□□□ 1.36
CBLN3-202ENST00000555436 POTEFA5A3E0 1075 aa23.54■■□□□ 1.36
CBLN3-202ENST00000555436 ADD2P35612 726 aa23.54■■□□□ 1.36
CBLN3-202ENST00000555436 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.54■■□□□ 1.36
CBLN3-202ENST00000555436 CENPFP49454 3210 aa23.54■■□□□ 1.36
CBLN3-202ENST00000555436 ZSWIM8A7E2V4 1837 aa23.54■■□□□ 1.36
CBLN3-202ENST00000555436 C19orf81C9J6K1 198 aa23.53■■□□□ 1.36
CBLN3-202ENST00000555436 PLCD1P51178 756 aa23.53■■□□□ 1.36
CBLN3-202ENST00000555436 LCORLQ8N3X6 602 aa23.53■■□□□ 1.36
CBLN3-202ENST00000555436 ECHDC1Q9NTX5 307 aa23.53■■□□□ 1.36
CBLN3-202ENST00000555436 USP17L10C9JJH3 530 aa23.52■■□□□ 1.36
CBLN3-202ENST00000555436 GH2P01242 217 aa23.52■■□□□ 1.36
CBLN3-202ENST00000555436 POLR3DP05423 398 aaPredicted RBP23.52■■□□□ 1.36
CBLN3-202ENST00000555436 SH3TC2Q8TF17 1288 aa23.52■■□□□ 1.36
CBLN3-202ENST00000555436 TMEM106CQ9BVX2 250 aa23.52■■□□□ 1.36
CBLN3-202ENST00000555436 MCM9Q9NXL9 1143 aa23.52■■□□□ 1.36
CBLN3-202ENST00000555436 TMOD4Q9NZQ9 345 aa23.52■■□□□ 1.36
CBLN3-202ENST00000555436 PCDHB15Q9Y5E8 787 aa23.52■■□□□ 1.36
CBLN3-202ENST00000555436 MYPNQ86TC9 1320 aa23.52■■□□□ 1.36
CBLN3-202ENST00000555436 ATAD5Q96QE3 1844 aa23.52■■□□□ 1.36
CBLN3-202ENST00000555436 LOC285556D6RIA3 1793 aa23.51■■□□□ 1.35
CBLN3-202ENST00000555436 GCLCP48506 637 aaPredicted RBP23.51■■□□□ 1.35
CBLN3-202ENST00000555436 FAM110CQ1W6H9 321 aa23.51■■□□□ 1.35
CBLN3-202ENST00000555436 ANKRD13CQ8N6S4 541 aa23.51■■□□□ 1.35
CBLN3-202ENST00000555436 RAET1EQ8TD07 263 aa23.51■■□□□ 1.35
CBLN3-202ENST00000555436 SDR42E1Q8WUS8 393 aa23.51■■□□□ 1.35
CBLN3-202ENST00000555436 ASCC2Q9H1I8 757 aaPredicted RBP23.51■■□□□ 1.35
CBLN3-202ENST00000555436 ARMT1Q9H993 441 aa23.51■■□□□ 1.35
CBLN3-202ENST00000555436 DCP1AQ9NPI6 582 aaPredicted RBP23.51■■□□□ 1.35
CBLN3-202ENST00000555436 PRKCZQ05513 592 aa23.5■■□□□ 1.35
CBLN3-202ENST00000555436 GABPAQ06546 454 aa23.5■■□□□ 1.35
CBLN3-202ENST00000555436 UBE3CQ15386 1083 aa23.5■■□□□ 1.35
CBLN3-202ENST00000555436 SLFNL1Q499Z3 407 aa23.5■■□□□ 1.35
CBLN3-202ENST00000555436 CERKLQ49MI3 558 aaPredicted RBP23.5■■□□□ 1.35
CBLN3-202ENST00000555436 TNRC18O15417 2968 aaPredicted RBP23.5■■□□□ 1.35
CBLN3-202ENST00000555436 MBD4O95243 580 aa23.49■■□□□ 1.35
CBLN3-202ENST00000555436 HOXA7P31268 230 aaPredicted RBP23.49■■□□□ 1.35
CBLN3-202ENST00000555436 SHMT1P34896 483 aa23.49■■□□□ 1.35
CBLN3-202ENST00000555436 GPATCH3Q96I76 525 aa23.49■■□□□ 1.35
CBLN3-202ENST00000555436 KIAA0100Q14667 2235 aaKnown RBP23.49■■□□□ 1.35
CBLN3-202ENST00000555436 MYH1P12882 1939 aa23.49■■□□□ 1.35
CBLN3-202ENST00000555436 DDX60LQ5H9U9 1706 aaKnown RBP23.48■■□□□ 1.35
CBLN3-202ENST00000555436 TNPO2O14787 897 aaKnown RBP23.48■■□□□ 1.35
CBLN3-202ENST00000555436 GRK4P32298 578 aa23.48■■□□□ 1.35
CBLN3-202ENST00000555436 ABCB5Q2M3G0 1257 aa23.48■■□□□ 1.35
CBLN3-202ENST00000555436 ZSCAN25Q6NSZ9 544 aa23.48■■□□□ 1.35
CBLN3-202ENST00000555436 YTHDC1Q96MU7 727 aaKnown RBP23.48■■□□□ 1.35
CBLN3-202ENST00000555436 PDE4DIPQ5VU43 2346 aa23.47■■□□□ 1.35
CBLN3-202ENST00000555436 CHGBP05060 677 aa23.47■■□□□ 1.35
CBLN3-202ENST00000555436 EN2P19622 333 aaPredicted RBP23.47■■□□□ 1.35
CBLN3-202ENST00000555436 IRX3P78415 501 aaPredicted RBP23.47■■□□□ 1.35
CBLN3-202ENST00000555436 EMILIN3Q9NT22 766 aa23.47■■□□□ 1.35
CBLN3-202ENST00000555436 ATP8A2Q9NTI2 1148 aa23.47■■□□□ 1.35
CBLN3-202ENST00000555436 TAOK2Q9UL54 1235 aa23.47■■□□□ 1.35
CBLN3-202ENST00000555436 GABRQQ9UN88 632 aa23.47■■□□□ 1.35
CBLN3-202ENST00000555436 PRKAB2O43741 272 aa23.46■■□□□ 1.35
CBLN3-202ENST00000555436 MYCP01106 439 aaPredicted RBP23.46■■□□□ 1.35
CBLN3-202ENST00000555436 EVX2Q03828 476 aa23.46■■□□□ 1.35
CBLN3-202ENST00000555436 RAB3GAP1Q15042 981 aa23.46■■□□□ 1.35
CBLN3-202ENST00000555436 USP17L2Q6R6M4 530 aa23.46■■□□□ 1.35
CBLN3-202ENST00000555436 CABP5Q9NP86 173 aa23.46■■□□□ 1.35
CBLN3-202ENST00000555436 BRCA2P51587 3418 aa23.45■■□□□ 1.34
CBLN3-202ENST00000555436 FLT3LGP49771 235 aa23.45■■□□□ 1.34
CBLN3-202ENST00000555436 SLAIN1Q8ND83 568 aa23.45■■□□□ 1.34
CBLN3-202ENST00000555436 P2RX7Q99572 595 aaKnown RBP23.45■■□□□ 1.34
CBLN3-202ENST00000555436 MORF4L1Q9UBU8 362 aa23.45■■□□□ 1.34
CBLN3-202ENST00000555436 RBBP6Q7Z6E9 1792 aaKnown RBP23.45■■□□□ 1.34
CBLN3-202ENST00000555436 CYP2D6P10635 497 aa23.44■■□□□ 1.34
CBLN3-202ENST00000555436 TSHZ3Q63HK5 1081 aa23.44■■□□□ 1.34
CBLN3-202ENST00000555436 KBTBD3Q8NAB2 608 aa23.44■■□□□ 1.34
CBLN3-202ENST00000555436 COA7Q96BR5 231 aa23.44■■□□□ 1.34
CBLN3-202ENST00000555436 C12orf42Q96LP6 360 aa23.44■■□□□ 1.34
CBLN3-202ENST00000555436 CRBNQ96SW2 442 aa23.44■■□□□ 1.34
CBLN3-202ENST00000555436 FEZ1Q99689 392 aa23.44■■□□□ 1.34
CBLN3-202ENST00000555436 KIAA1683Q9H0B3 1180 aa23.44■■□□□ 1.34
CBLN3-202ENST00000555436 PUS7LQ9H0K6 701 aaKnown RBP23.44■■□□□ 1.34
CBLN3-202ENST00000555436 GUCY1A2P33402 732 aa23.43■■□□□ 1.34
CBLN3-202ENST00000555436 USP14P54578 494 aa23.43■■□□□ 1.34
CBLN3-202ENST00000555436 HERVK_113P62684 666 aa23.43■■□□□ 1.34
CBLN3-202ENST00000555436 IRF5Q13568 498 aa23.43■■□□□ 1.34
CBLN3-202ENST00000555436 MTFR1Q15390 333 aa23.43■■□□□ 1.34
CBLN3-202ENST00000555436 SWAP70Q9UH65 585 aa23.43■■□□□ 1.34
CBLN3-202ENST00000555436 NAV1Q8NEY1 1877 aa23.43■■□□□ 1.34
CBLN3-202ENST00000555436 ADCY3O60266 1144 aa23.42■■□□□ 1.34
CBLN3-202ENST00000555436 ACER1Q8TDN7 264 aa23.42■■□□□ 1.34
CBLN3-202ENST00000555436 DDRGK1Q96HY6 314 aa23.42■■□□□ 1.34
CBLN3-202ENST00000555436 BIN2Q9UBW5 565 aaPredicted RBP23.42■■□□□ 1.34
CBLN3-202ENST00000555436 SLC4A4Q9Y6R1 1079 aa23.42■■□□□ 1.34
CBLN3-202ENST00000555436 TTC41PQ6P2S7 1318 aa23.41■■□□□ 1.34
CBLN3-202ENST00000555436 SEPT2Q15019 361 aa23.41■■□□□ 1.34
CBLN3-202ENST00000555436 ZYXQ15942 572 aaKnown RBP23.41■■□□□ 1.34
CBLN3-202ENST00000555436 C12orf60Q5U649 245 aa23.41■■□□□ 1.34
CBLN3-202ENST00000555436 AMOTL1Q8IY63 956 aa23.41■■□□□ 1.34
CBLN3-202ENST00000555436 SLC44A5Q8NCS7 719 aa23.41■■□□□ 1.34
CBLN3-202ENST00000555436 PXYLP1Q8TE99 480 aa23.41■■□□□ 1.34
CBLN3-202ENST00000555436 GTF3C2Q8WUA4 911 aaPredicted RBP23.41■■□□□ 1.34
CBLN3-202ENST00000555436 USP17L12C9JPN9 530 aa23.4■■□□□ 1.34
CBLN3-202ENST00000555436 USP17L21D6R901 530 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms