RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ZNF287Q9HBT7 754 aa11.95□□□□□ -0.5
NEK9-205ENST00000555405 CLIP2Q9UDT6 1046 aa11.95□□□□□ -0.5
NEK9-205ENST00000555405 RPAP1Q9BWH6 1393 aaPredicted RBP11.95□□□□□ -0.5
NEK9-205ENST00000555405 A0A1B0GUL6 1792 aa11.95□□□□□ -0.5
NEK9-205ENST00000555405 MYH7P12883 1935 aa11.95□□□□□ -0.5
NEK9-205ENST00000555405 GJB2P29033 226 aa11.95□□□□□ -0.5
NEK9-205ENST00000555405 FERMT3Q86UX7 667 aa11.95□□□□□ -0.5
NEK9-205ENST00000555405 CERS3Q8IU89 383 aa11.95□□□□□ -0.5
NEK9-205ENST00000555405 LRRC47Q8N1G4 583 aaKnown RBP11.95□□□□□ -0.5
NEK9-205ENST00000555405 ARAP2Q8WZ64 1704 aa11.95□□□□□ -0.5
NEK9-205ENST00000555405 ZSCAN31Q96LW9 406 aaPredicted RBP11.95□□□□□ -0.5
NEK9-205ENST00000555405 GPRC5DQ9NZD1 345 aa11.95□□□□□ -0.5
NEK9-205ENST00000555405 PI4KBQ9UBF8 816 aa11.95□□□□□ -0.5
NEK9-205ENST00000555405 MKRN1Q9UHC7 482 aaKnown RBP11.95□□□□□ -0.5
NEK9-205ENST00000555405 RASA1P20936 1047 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 PDIA3P30101 505 aaKnown RBP11.94□□□□□ -0.5
NEK9-205ENST00000555405 FKBP1AP62942 108 aaKnown RBP11.94□□□□□ -0.5
NEK9-205ENST00000555405 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
NEK9-205ENST00000555405 CERKLQ49MI3 558 aaPredicted RBP11.94□□□□□ -0.5
NEK9-205ENST00000555405 SBK1Q52WX2 424 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 MCTP1Q6DN14 999 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 GPC2Q8N158 579 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 PHKBQ93100 1093 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 CHAMP1Q96JM3 812 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 KAT14Q9H8E8 782 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 LTBP3Q9NS15 1303 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 GOLGA8HP0CJ92 632 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 SCRN1Q12765 414 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 RASGRP2Q7LDG7 609 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 ENAHQ8N8S7 591 aaPredicted RBP11.94□□□□□ -0.5
NEK9-205ENST00000555405 DEFB129Q9H1M3 183 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 CPVLQ9H3G5 476 aa11.94□□□□□ -0.5
NEK9-205ENST00000555405 LRRC37AA6NMS7 1700 aa11.93□□□□□ -0.5
NEK9-205ENST00000555405 SH2B2O14492 632 aaPredicted RBP11.93□□□□□ -0.5
NEK9-205ENST00000555405 TNNI2P48788 182 aa11.93□□□□□ -0.5
NEK9-205ENST00000555405 IGDCC4Q8TDY8 1250 aa11.93□□□□□ -0.5
NEK9-205ENST00000555405 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.93□□□□□ -0.5
NEK9-205ENST00000555405 RPS12P25398 132 aaKnown RBP11.93□□□□□ -0.5
NEK9-205ENST00000555405 IKQ13123 557 aaPredicted RBP11.93□□□□□ -0.5
NEK9-205ENST00000555405 NBPF12Q5TAG4 269 aaPredicted RBP11.93□□□□□ -0.5
NEK9-205ENST00000555405 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
NEK9-205ENST00000555405 CATIPQ7Z7H3 387 aa11.93□□□□□ -0.5
NEK9-205ENST00000555405 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
NEK9-205ENST00000555405 DPF2Q92785 391 aa11.93□□□□□ -0.5
NEK9-205ENST00000555405 TMEM87BQ96K49 555 aa11.93□□□□□ -0.5
NEK9-205ENST00000555405 LY9Q9HBG7 655 aa11.93□□□□□ -0.5
NEK9-205ENST00000555405 SH2B1Q9NRF2 756 aaPredicted RBP11.93□□□□□ -0.5
NEK9-205ENST00000555405 GH2P01242 217 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 NCLP19338 710 aaKnown RBP11.92□□□□□ -0.5
NEK9-205ENST00000555405 HIRAP54198 1017 aaPredicted RBP11.92□□□□□ -0.5
NEK9-205ENST00000555405 LARP1BQ659C4 914 aaKnown RBP11.92□□□□□ -0.5
NEK9-205ENST00000555405 APOA5Q6Q788 366 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 ZNF654Q8IZM8 581 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 CEP95Q96GE4 821 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 CABP5Q9NP86 173 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 SEPT2Q15019 361 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 SLC26A6Q9BXS9 759 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 GJB4Q9NTQ9 266 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 ANAPC4Q9UJX5 808 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 CCDC88AQ3V6T2 1871 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 H3BQV1 296 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 CPLX2Q6PUV4 134 aaKnown RBP11.92□□□□□ -0.5
NEK9-205ENST00000555405 SPICE1Q8N0Z3 855 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 FAM151AQ8WW52 585 aa11.92□□□□□ -0.5
NEK9-205ENST00000555405 DCPSQ96C86 337 aaKnown RBP11.92□□□□□ -0.5
NEK9-205ENST00000555405 DHX36Q9H2U1 1008 aaKnown RBP11.92□□□□□ -0.5
NEK9-205ENST00000555405 UBE2Q2LH0YL09 131 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 RTN1Q16799 776 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 CCDC96Q2M329 555 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 C16orf86Q6ZW13 317 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 MRIQ9BWK5 157 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 IDI2Q9BXS1 227 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 CHMP5Q9NZZ3 219 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.91□□□□□ -0.5
NEK9-205ENST00000555405 CDC27P30260 824 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 AKAP17AQ02040 695 aaKnown RBP11.91□□□□□ -0.5
NEK9-205ENST00000555405 ABCB5Q2M3G0 1257 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 SULF1Q8IWU6 871 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 PNMA1Q8ND90 353 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 GPCPD1Q9NPB8 672 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 IL17RBQ9NRM6 502 aa11.91□□□□□ -0.5
NEK9-205ENST00000555405 ORC3Q9UBD5 711 aaPredicted RBP11.91□□□□□ -0.5
NEK9-205ENST00000555405 FRMPD2Q68DX3 1309 aaPredicted RBP11.91□□□□□ -0.5
NEK9-205ENST00000555405 PTPDC1A2A3K4 754 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 ADM5C9JUS6 153 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 TNFAIP1Q13829 316 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 TMED8Q6PL24 325 aaPredicted RBP11.9□□□□□ -0.5
NEK9-205ENST00000555405 CTCFLQ8NI51 663 aaPredicted RBP11.9□□□□□ -0.5
NEK9-205ENST00000555405 AIFM3Q96NN9 605 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 UBA5Q9GZZ9 404 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 RRAGCQ9HB90 399 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 LTBP1Q14766 1721 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 ORC4O43929 436 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 SHMT1P34896 483 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 ST3GAL1Q11201 340 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 USP17L2Q6R6M4 530 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 KRT26Q7Z3Y9 468 aa11.9□□□□□ -0.5
NEK9-205ENST00000555405 USP48Q86UV5 1035 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms