RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ZHX2Q9Y6X8 837 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 MYH1P12882 1939 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 CENPBP07199 599 aaPredicted RBP14.84□□□□□ -0.03
SYNE2-214ENST00000554928 SREBF2Q12772 1141 aa14.84□□□□□ -0.03
SYNE2-214ENST00000554928 TTC22Q5TAA0 569 aa14.84□□□□□ -0.03
SYNE2-214ENST00000554928 COL13A1Q5TAT6 717 aaPredicted RBP14.84□□□□□ -0.03
SYNE2-214ENST00000554928 C12orf60Q5U649 245 aa14.84□□□□□ -0.03
SYNE2-214ENST00000554928 TATDN1Q6P1N9 297 aa14.84□□□□□ -0.03
SYNE2-214ENST00000554928 TTC6Q86TZ1 520 aa14.84□□□□□ -0.03
SYNE2-214ENST00000554928 ZNF589Q86UQ0 364 aaPredicted RBP14.84□□□□□ -0.03
SYNE2-214ENST00000554928 BEGAINQ9BUH8 593 aa14.84□□□□□ -0.03
SYNE2-214ENST00000554928 PICK1Q9NRD5 415 aa14.84□□□□□ -0.03
SYNE2-214ENST00000554928 AFG3L2Q9Y4W6 797 aa14.84□□□□□ -0.03
SYNE2-214ENST00000554928 DOCK1Q14185 1865 aa14.83□□□□□ -0.04
SYNE2-214ENST00000554928 TRIM75PA6NK02 468 aa14.83□□□□□ -0.04
SYNE2-214ENST00000554928 BTBD19C9JJ37 291 aa14.83□□□□□ -0.04
SYNE2-214ENST00000554928 SDSP20132 328 aa14.83□□□□□ -0.04
SYNE2-214ENST00000554928 GTF2A2P52657 109 aa14.83□□□□□ -0.04
SYNE2-214ENST00000554928 STK11IPQ8N1F8 1099 aa14.83□□□□□ -0.04
SYNE2-214ENST00000554928 IL25Q9H293 177 aa14.83□□□□□ -0.04
SYNE2-214ENST00000554928 ZBTB21Q9ULJ3 1066 aa14.83□□□□□ -0.04
SYNE2-214ENST00000554928 BAZ2AQ9UIF9 1905 aaKnown RBP14.82□□□□□ -0.04
SYNE2-214ENST00000554928 GH2P01242 217 aa14.82□□□□□ -0.04
SYNE2-214ENST00000554928 GUCY1A2P33402 732 aa14.82□□□□□ -0.04
SYNE2-214ENST00000554928 SNAPC2Q13487 334 aa14.82□□□□□ -0.04
SYNE2-214ENST00000554928 GPAT2Q6NUI2 795 aa14.82□□□□□ -0.04
SYNE2-214ENST00000554928 CENPQQ7L2Z9 268 aaPredicted RBP14.82□□□□□ -0.04
SYNE2-214ENST00000554928 REM2Q8IYK8 340 aaPredicted RBP14.82□□□□□ -0.04
SYNE2-214ENST00000554928 TRIM34Q9BYJ4 488 aa14.82□□□□□ -0.04
SYNE2-214ENST00000554928 SAGE1Q9NXZ1 904 aa14.82□□□□□ -0.04
SYNE2-214ENST00000554928 LAMB1P07942 1786 aa14.82□□□□□ -0.04
SYNE2-214ENST00000554928 PHIPQ8WWQ0 1821 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 PATL2C9JE40 543 aaKnown RBP14.81□□□□□ -0.04
SYNE2-214ENST00000554928 CA12O43570 354 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 NEFLP07196 543 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 CETPP11597 493 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 SPP2Q13103 211 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 CRHR2Q13324 411 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 LRRFIP1Q32MZ4 808 aaKnown RBP14.81□□□□□ -0.04
SYNE2-214ENST00000554928 CLEC10AQ8IUN9 316 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 IFNL3Q8IZI9 196 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 CCDC136Q96JN2 1154 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 HELLSQ9NRZ9 838 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 TACC3Q9Y6A5 838 aa14.81□□□□□ -0.04
SYNE2-214ENST00000554928 A0A0G2JLL6 359 aaPredicted RBP14.8□□□□□ -0.04
SYNE2-214ENST00000554928 USP17L5A8MUK1 530 aa14.8□□□□□ -0.04
SYNE2-214ENST00000554928 MINDY4BA8MYZ0 360 aa14.8□□□□□ -0.04
SYNE2-214ENST00000554928 CXCL11O14625 94 aa14.8□□□□□ -0.04
SYNE2-214ENST00000554928 APPP05067 770 aa14.8□□□□□ -0.04
SYNE2-214ENST00000554928 AKR1B1P15121 316 aa14.8□□□□□ -0.04
SYNE2-214ENST00000554928 CDK8P49336 464 aa14.8□□□□□ -0.04
SYNE2-214ENST00000554928 INHBEP58166 350 aa14.8□□□□□ -0.04
SYNE2-214ENST00000554928 CERKLQ49MI3 558 aaPredicted RBP14.8□□□□□ -0.04
SYNE2-214ENST00000554928 SBK1Q52WX2 424 aa14.8□□□□□ -0.04
SYNE2-214ENST00000554928 C16orf86Q6ZW13 317 aa14.8□□□□□ -0.04
SYNE2-214ENST00000554928 PRRT2Q7Z6L0 340 aaPredicted RBP14.8□□□□□ -0.04
SYNE2-214ENST00000554928 ASNSP08243 561 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 GNAT2P19087 354 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 TDO2P48775 406 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 CAP1Q01518 475 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 SEPT2Q15019 361 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 ABCB5Q2M3G0 1257 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 MCMDC2Q4G0Z9 681 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 TREML2Q5T2D2 321 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 GIMAP6Q6P9H5 292 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 CWC27Q6UX04 472 aaKnown RBP14.79□□□□□ -0.04
SYNE2-214ENST00000554928 GADL1Q6ZQY3 521 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 ZNF280CQ8ND82 737 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 ACER1Q8TDN7 264 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 ATAD5Q96QE3 1844 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 INCENPQ9NQS7 918 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 PRDM10Q9NQV6 1147 aa14.79□□□□□ -0.04
SYNE2-214ENST00000554928 ARPP21Q9UBL0 812 aaPredicted RBP14.79□□□□□ -0.04
SYNE2-214ENST00000554928 PRDM1O75626 825 aa14.78□□□□□ -0.04
SYNE2-214ENST00000554928 HMGCS2P54868 508 aa14.78□□□□□ -0.04
SYNE2-214ENST00000554928 MTMR2Q13614 643 aa14.78□□□□□ -0.04
SYNE2-214ENST00000554928 RAB3GAP1Q15042 981 aa14.78□□□□□ -0.04
SYNE2-214ENST00000554928 WDR18Q9BV38 432 aa14.78□□□□□ -0.04
SYNE2-214ENST00000554928 ROBO3Q96MS0 1386 aa14.77□□□□□ -0.04
SYNE2-214ENST00000554928 CCDC171Q6TFL3 1326 aa14.77□□□□□ -0.04
SYNE2-214ENST00000554928 GPR25O00155 361 aa14.77□□□□□ -0.05
SYNE2-214ENST00000554928 PDHXO00330 501 aa14.77□□□□□ -0.05
SYNE2-214ENST00000554928 TAF1CQ15572 869 aaPredicted RBP14.77□□□□□ -0.05
SYNE2-214ENST00000554928 ANKRD23Q86SG2 305 aa14.77□□□□□ -0.05
SYNE2-214ENST00000554928 SIAH1Q8IUQ4 282 aa14.77□□□□□ -0.05
SYNE2-214ENST00000554928 ZNF296Q8WUU4 475 aaPredicted RBP14.77□□□□□ -0.05
SYNE2-214ENST00000554928 DDRGK1Q96HY6 314 aa14.77□□□□□ -0.05
SYNE2-214ENST00000554928 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.77□□□□□ -0.05
SYNE2-214ENST00000554928 CFHR5Q9BXR6 569 aa14.77□□□□□ -0.05
SYNE2-214ENST00000554928 NAPBQ9H115 298 aa14.77□□□□□ -0.05
SYNE2-214ENST00000554928 DIAPH3Q9NSV4 1193 aa14.77□□□□□ -0.05
SYNE2-214ENST00000554928 A0A1W2PRG0 241 aa14.76□□□□□ -0.05
SYNE2-214ENST00000554928 MPHOSPH10O00566 681 aaKnown RBP14.76□□□□□ -0.05
SYNE2-214ENST00000554928 ALDH1A1P00352 501 aa14.76□□□□□ -0.05
SYNE2-214ENST00000554928 CYP2C8P10632 490 aa14.76□□□□□ -0.05
SYNE2-214ENST00000554928 HSPD1P10809 573 aaKnown RBP14.76□□□□□ -0.05
SYNE2-214ENST00000554928 RASA1P20936 1047 aa14.76□□□□□ -0.05
SYNE2-214ENST00000554928 CTDSPL2Q05D32 466 aa14.76□□□□□ -0.05
SYNE2-214ENST00000554928 PPARAQ07869 468 aa14.76□□□□□ -0.05
SYNE2-214ENST00000554928 ZYXQ15942 572 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms