RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CSADQ9Y600 493 aa19.46■□□□□ 0.71
SPTLC2-203ENST00000554901 SLURP2P0DP57 97 aa19.45■□□□□ 0.7
SPTLC2-203ENST00000554901 PRKG1Q13976 671 aa19.45■□□□□ 0.7
SPTLC2-203ENST00000554901 SCYL3Q8IZE3 742 aa19.45■□□□□ 0.7
SPTLC2-203ENST00000554901 NCOA7Q8NI08 942 aa19.45■□□□□ 0.7
SPTLC2-203ENST00000554901 CABP5Q9NP86 173 aa19.45■□□□□ 0.7
SPTLC2-203ENST00000554901 PRDM1O75626 825 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 INPP5BP32019 993 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 ABCB5Q2M3G0 1257 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 TMEM179Q6ZVK1 233 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 RALYLQ86SE5 291 aaKnown RBP19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 RASEFQ8IZ41 740 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 STK11IPQ8N1F8 1099 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 IL17RAQ96F46 866 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 TOMM22Q9NS69 142 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 SNX14Q9Y5W7 946 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 TACC3Q9Y6A5 838 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 NEDD4P46934 1319 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 PLIN4Q96Q06 1357 aa19.44■□□□□ 0.7
SPTLC2-203ENST00000554901 APLP1P51693 650 aa19.43■□□□□ 0.7
SPTLC2-203ENST00000554901 PPP4R3BQ5MIZ7 849 aa19.43■□□□□ 0.7
SPTLC2-203ENST00000554901 NEDD1Q8NHV4 660 aa19.43■□□□□ 0.7
SPTLC2-203ENST00000554901 HHIPL1Q96JK4 782 aa19.43■□□□□ 0.7
SPTLC2-203ENST00000554901 TBC1D2Q9BYX2 928 aa19.43■□□□□ 0.7
SPTLC2-203ENST00000554901 PICK1Q9NRD5 415 aa19.43■□□□□ 0.7
SPTLC2-203ENST00000554901 FZD1Q9UP38 647 aa19.43■□□□□ 0.7
SPTLC2-203ENST00000554901 TSPY2A6NKD2 308 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 UBE2Q2LH0YL09 131 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 RANBP6O60518 1105 aaKnown RBP19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 HMGB1P09429 215 aaKnown RBP19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 TSPY3P0CV98 308 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 TSPY8P0CW00 308 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 VGLL4Q14135 290 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 RRP1BQ14684 758 aaKnown RBP19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 RRP12Q5JTH9 1297 aaKnown RBP19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 STOX1Q6ZVD7 989 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 SAPCD2Q86UD0 394 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 INCENPQ9NQS7 918 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 ZBTB21Q9ULJ3 1066 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 TAF6LQ9Y6J9 622 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 TLL2Q9Y6L7 1015 aa19.42■□□□□ 0.7
SPTLC2-203ENST00000554901 MYH8P13535 1937 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 GH2P01242 217 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 AKR1B1P15121 316 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 PSMA5P28066 241 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 RBM25P49756 843 aaKnown RBP19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 HUNKP57058 714 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 TFAP4Q01664 338 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 CCDC178Q5BJE1 867 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 MOB2Q70IA6 237 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 ZKSCAN4Q969J2 545 aaPredicted RBP19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 MTA3Q9BTC8 594 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 C22orf23Q9BZE7 217 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 CREBZFQ9NS37 354 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 TCP11L1Q9NUJ3 509 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 B4E1Z4 1266 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 GDF11O95390 407 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 IQCA1Q86XH1 822 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 NEK1Q96PY6 1258 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 TM6SF1Q9BZW5 370 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 KANSL2Q9H9L4 492 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 SNCAIPQ9Y6H5 919 aa19.41■□□□□ 0.7
SPTLC2-203ENST00000554901 MPHOSPH10O00566 681 aaKnown RBP19.4■□□□□ 0.7
SPTLC2-203ENST00000554901 KDM4AO75164 1064 aa19.4■□□□□ 0.7
SPTLC2-203ENST00000554901 ERO1BQ86YB8 467 aa19.4■□□□□ 0.7
SPTLC2-203ENST00000554901 MB21D2Q8IYB1 491 aaPredicted RBP19.4■□□□□ 0.7
SPTLC2-203ENST00000554901 SLC10A4Q96EP9 437 aa19.4■□□□□ 0.7
SPTLC2-203ENST00000554901 ZSWIM5Q9P217 1185 aa19.4■□□□□ 0.7
SPTLC2-203ENST00000554901 DOCK1Q14185 1865 aa19.39■□□□□ 0.69
SPTLC2-203ENST00000554901 WDR19Q8NEZ3 1342 aa19.39■□□□□ 0.69
SPTLC2-203ENST00000554901 IGKV6D-41A0A0C4DH26 115 aa19.39■□□□□ 0.69
SPTLC2-203ENST00000554901 SPDYE5A6NIY4 337 aa19.39■□□□□ 0.69
SPTLC2-203ENST00000554901 USP17L5A8MUK1 530 aa19.39■□□□□ 0.69
SPTLC2-203ENST00000554901 PTPRAP18433 802 aa19.39■□□□□ 0.69
SPTLC2-203ENST00000554901 MCM5P33992 734 aa19.39■□□□□ 0.69
SPTLC2-203ENST00000554901 FAM47AQ5JRC9 791 aa19.39■□□□□ 0.69
SPTLC2-203ENST00000554901 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.39■□□□□ 0.69
SPTLC2-203ENST00000554901 OTOFQ9HC10 1997 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 GUCY1A2P33402 732 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 JAG1P78504 1218 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 PPATQ06203 517 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 ADCK5Q3MIX3 580 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 IL27Q8NEV9 243 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 CLMNQ96JQ2 1002 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 TTC14Q96N46 770 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 TBC1D32Q96NH3 1257 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 WDR18Q9BV38 432 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 AS3MTQ9HBK9 375 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 ABT1Q9ULW3 272 aaKnown RBP19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 SYNPO2Q9UMS6 1093 aa19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 GREB1LQ9C091 1923 aaPredicted RBP19.38■□□□□ 0.69
SPTLC2-203ENST00000554901 NOVP48745 357 aa19.37■□□□□ 0.69
SPTLC2-203ENST00000554901 SEPT2Q15019 361 aa19.37■□□□□ 0.69
SPTLC2-203ENST00000554901 SART3Q15020 963 aaKnown RBP19.37■□□□□ 0.69
SPTLC2-203ENST00000554901 RAB3GAP1Q15042 981 aa19.37■□□□□ 0.69
SPTLC2-203ENST00000554901 DHX32Q7L7V1 743 aaKnown RBP19.37■□□□□ 0.69
SPTLC2-203ENST00000554901 JAKMIP1Q96N16 626 aaKnown RBP19.37■□□□□ 0.69
SPTLC2-203ENST00000554901 UBAC1Q9BSL1 405 aa19.37■□□□□ 0.69
SPTLC2-203ENST00000554901 MTMR4Q9NYA4 1195 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms