RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 LRCH3Q96II8 777 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 MORF4L1Q9UBU8 362 aa11.86□□□□□ -0.51
TMEM253-204ENST00000554844 RANBP2P49792 3224 aaKnown RBP11.85□□□□□ -0.51
TMEM253-204ENST00000554844 USP17L10C9JJH3 530 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 SOX1O00570 391 aaPredicted RBP11.85□□□□□ -0.51
TMEM253-204ENST00000554844 GNAI2P04899 355 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
TMEM253-204ENST00000554844 RGS2P41220 211 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 BACE1P56817 501 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 MTX1Q13505 466 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 CCDC158Q5M9N0 1113 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 GPR153Q6NV75 609 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 PI16Q6UXB8 463 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 SH3RF3Q8TEJ3 882 aaPredicted RBP11.85□□□□□ -0.51
TMEM253-204ENST00000554844 ARHGAP45Q92619 1136 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 GDF15Q99988 308 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 WDR18Q9BV38 432 aa11.85□□□□□ -0.51
TMEM253-204ENST00000554844 UBE2OQ9C0C9 1292 aaKnown RBP11.85□□□□□ -0.51
TMEM253-204ENST00000554844 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMEM253-204ENST00000554844 DDX60LQ5H9U9 1706 aaKnown RBP11.84□□□□□ -0.51
TMEM253-204ENST00000554844 GLRX3O76003 335 aaKnown RBP11.84□□□□□ -0.51
TMEM253-204ENST00000554844 SYN1P17600 705 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 HERVK_113P62684 666 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 FOXP4Q8IVH2 680 aaPredicted RBP11.84□□□□□ -0.51
TMEM253-204ENST00000554844 MAPKAPK5Q8IW41 473 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 MIER1Q8N108 512 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 DEFB123Q8N688 67 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 TGFBRAP1Q8WUH2 860 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 TRIB2Q92519 343 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 FEZ1Q99689 392 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 PAGR1Q9BTK6 254 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 GJD2Q9UKL4 321 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 OGDHLQ9ULD0 1010 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 SZT2Q5T011 3432 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 ALPK3Q96L96 1907 aa11.84□□□□□ -0.51
TMEM253-204ENST00000554844 XRCC5P13010 732 aaKnown RBP11.83□□□□□ -0.52
TMEM253-204ENST00000554844 HOXA7P31268 230 aaPredicted RBP11.83□□□□□ -0.52
TMEM253-204ENST00000554844 MCAMP43121 646 aa11.83□□□□□ -0.52
TMEM253-204ENST00000554844 MAGEA10P43363 369 aaPredicted RBP11.83□□□□□ -0.52
TMEM253-204ENST00000554844 CCNA1P78396 465 aa11.83□□□□□ -0.52
TMEM253-204ENST00000554844 TRIM32Q13049 653 aa11.83□□□□□ -0.52
TMEM253-204ENST00000554844 USP17L2Q6R6M4 530 aa11.83□□□□□ -0.52
TMEM253-204ENST00000554844 TDHQ8IZJ6 230 aa11.83□□□□□ -0.52
TMEM253-204ENST00000554844 ZNF384Q8TF68 577 aa11.83□□□□□ -0.52
TMEM253-204ENST00000554844 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
TMEM253-204ENST00000554844 P2RX7Q99572 595 aaKnown RBP11.83□□□□□ -0.52
TMEM253-204ENST00000554844 IGSF3O75054 1194 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 GDF11O95390 407 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 RARSP54136 660 aaKnown RBP11.82□□□□□ -0.52
TMEM253-204ENST00000554844 ERVK-9P63128 1117 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 ERVK-24P63145 666 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 LRIT3Q3SXY7 679 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 WDR78Q5VTH9 848 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 PLEKHH3Q7Z736 793 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 TRMT2AQ8IZ69 625 aaKnown RBP11.82□□□□□ -0.52
TMEM253-204ENST00000554844 APBA2Q99767 749 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 SNRKQ9NRH2 765 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 ZBTB21Q9ULJ3 1066 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 FLT1P17948 1338 aa11.82□□□□□ -0.52
TMEM253-204ENST00000554844 USP5P45974 858 aa11.81□□□□□ -0.52
TMEM253-204ENST00000554844 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
TMEM253-204ENST00000554844 RRP1BQ14684 758 aaKnown RBP11.81□□□□□ -0.52
TMEM253-204ENST00000554844 MAP3K21Q5TCX8 1036 aa11.81□□□□□ -0.52
TMEM253-204ENST00000554844 MFSD14CQ5VZR4 134 aa11.81□□□□□ -0.52
TMEM253-204ENST00000554844 GPR142Q7Z601 462 aa11.81□□□□□ -0.52
TMEM253-204ENST00000554844 FRAT1Q92837 279 aaPredicted RBP11.81□□□□□ -0.52
TMEM253-204ENST00000554844 LBHD1Q9BQE6 289 aaPredicted RBP11.81□□□□□ -0.52
TMEM253-204ENST00000554844 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
TMEM253-204ENST00000554844 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
TMEM253-204ENST00000554844 PALD1Q9ULE6 856 aa11.81□□□□□ -0.52
TMEM253-204ENST00000554844 IVNS1ABPQ9Y6Y0 642 aa11.81□□□□□ -0.52
TMEM253-204ENST00000554844 USP14P54578 494 aa11.8□□□□□ -0.52
TMEM253-204ENST00000554844 PPP4CP60510 307 aa11.8□□□□□ -0.52
TMEM253-204ENST00000554844 CACNB2Q08289 660 aaPredicted RBP11.8□□□□□ -0.52
TMEM253-204ENST00000554844 TNNI3KQ59H18 835 aa11.8□□□□□ -0.52
TMEM253-204ENST00000554844 TXNRD2Q9NNW7 524 aa11.8□□□□□ -0.52
TMEM253-204ENST00000554844 CABP5Q9NP86 173 aa11.8□□□□□ -0.52
TMEM253-204ENST00000554844 GPR108Q9NPR9 543 aa11.8□□□□□ -0.52
TMEM253-204ENST00000554844 PRKAG2Q9UGJ0 569 aa11.8□□□□□ -0.52
TMEM253-204ENST00000554844 RABGAP1Q9Y3P9 1069 aa11.8□□□□□ -0.52
TMEM253-204ENST00000554844 FPGT-TNNI3KV9GXZ4 949 aa11.8□□□□□ -0.52
TMEM253-204ENST00000554844 PLXNB2O15031 1838 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 USP17L17D6RBQ6 530 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 USP17L19D6RCP7 530 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 USP17L20D6RJB6 530 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 MSCO60682 206 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 CYP7A1P22680 504 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 CNGA1P29973 690 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 USP17L24Q0WX57 530 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 MAP2K5Q13163 448 aa11.79□□□□□ -0.52
TMEM253-204ENST00000554844 ZYXQ15942 572 aaKnown RBP11.79□□□□□ -0.52
TMEM253-204ENST00000554844 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms