RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 JAG1P78504 1218 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 ABCB5Q2M3G0 1257 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 RRP12Q5JTH9 1297 aaKnown RBP14.5□□□□□ -0.09
SHMT2-209ENST00000553949 NOL9Q5SY16 702 aaKnown RBP14.5□□□□□ -0.09
SHMT2-209ENST00000553949 SAPCD2Q86UD0 394 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 SCYL3Q8IZE3 742 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 KCNB2Q92953 911 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 CCDC17Q96LX7 622 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 BACH2Q9BYV9 841 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 TOMM22Q9NS69 142 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 CSADQ9Y600 493 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 TLL2Q9Y6L7 1015 aa14.5□□□□□ -0.09
SHMT2-209ENST00000553949 E7EWF7 191 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 RANBP6O60518 1105 aaKnown RBP14.49□□□□□ -0.09
SHMT2-209ENST00000553949 GH2P01242 217 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 ZKSCAN1P17029 563 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-209ENST00000553949 MCCP23508 829 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 C1QTNF8P60827 252 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 SHROOM1Q2M3G4 852 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-209ENST00000553949 STOX1Q6ZVD7 989 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 CLMNQ96JQ2 1002 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 CNNM2Q9H8M5 875 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 PICK1Q9NRD5 415 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 GINM1Q9NU53 330 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 ZBTB21Q9ULJ3 1066 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 ABT1Q9ULW3 272 aaKnown RBP14.49□□□□□ -0.09
SHMT2-209ENST00000553949 SNCAIPQ9Y6H5 919 aa14.49□□□□□ -0.09
SHMT2-209ENST00000553949 B4E1Z4 1266 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 MPHOSPH10O00566 681 aaKnown RBP14.48□□□□□ -0.09
SHMT2-209ENST00000553949 ASNSP08243 561 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 NT5C2P49902 561 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 TFAP4Q01664 338 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 TRDNQ13061 729 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 TSGA10IPQ3SY00 556 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 FAM47AQ5JRC9 791 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 KRT23Q9C075 422 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 ELP3Q9H9T3 547 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 CABP5Q9NP86 173 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 CREBZFQ9NS37 354 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-209ENST00000553949 SNX14Q9Y5W7 946 aa14.48□□□□□ -0.09
SHMT2-209ENST00000553949 TRPM7Q96QT4 1865 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 TSPY2A6NKD2 308 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 TSPY3P0CV98 308 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 TSPY8P0CW00 308 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 GUCY1A2P33402 732 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 KRT32Q14532 448 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 TMEM179Q6ZVK1 233 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 NEDD1Q8NHV4 660 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 NCOA7Q8NI08 942 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 NKX2-3Q8TAU0 364 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 ESR2Q92731 530 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 SLC10A4Q96EP9 437 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.47□□□□□ -0.095e-8■■■□□ 18.8
SHMT2-209ENST00000553949 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-209ENST00000553949 LAMA4Q16363 1823 aa14.47□□□□□ -0.09
SHMT2-209ENST00000553949 KDM4AO75164 1064 aa14.46□□□□□ -0.09
SHMT2-209ENST00000553949 PTPRAP18433 802 aa14.46□□□□□ -0.09
SHMT2-209ENST00000553949 SEPT2Q15019 361 aa14.46□□□□□ -0.09
SHMT2-209ENST00000553949 RAB3GAP1Q15042 981 aa14.46□□□□□ -0.09
SHMT2-209ENST00000553949 RALYLQ86SE5 291 aaKnown RBP14.46□□□□□ -0.09
SHMT2-209ENST00000553949 HHIPL1Q96JK4 782 aa14.46□□□□□ -0.09
SHMT2-209ENST00000553949 UPF2Q9HAU5 1272 aaKnown RBP14.46□□□□□ -0.09
SHMT2-209ENST00000553949 PLIN4Q96Q06 1357 aa14.46□□□□□ -0.1
SHMT2-209ENST00000553949 IGKV6D-41A0A0C4DH26 115 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 SPDYE5A6NIY4 337 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 USP17L5A8MUK1 530 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 ZNF157P51786 506 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-209ENST00000553949 ADCK5Q3MIX3 580 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 RGMBQ6NW40 437 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 CCDC84Q86UT8 332 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-209ENST00000553949 ERO1BQ86YB8 467 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 MB21D2Q8IYB1 491 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-209ENST00000553949 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 OPTNQ96CV9 577 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 NEK1Q96PY6 1258 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 C22orf23Q9BZE7 217 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 KANSL2Q9H9L4 492 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 ZSWIM5Q9P217 1185 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 ZHX2Q9Y6X8 837 aa14.45□□□□□ -0.1
SHMT2-209ENST00000553949 RASSF10A6NK89 507 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 NMT2O60551 498 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 HSPA6P17066 643 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 ANAPC15P60006 121 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 PPATQ06203 517 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 CYB5R4Q7L1T6 521 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 CLEC10AQ8IUN9 316 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 OTUD5Q96G74 571 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 WNK4Q96J92 1243 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 JAKMIP1Q96N16 626 aaKnown RBP14.44□□□□□ -0.1
SHMT2-209ENST00000553949 TBC1D2Q9BYX2 928 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 IL17RBQ9NRM6 502 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 TCP11L1Q9NUJ3 509 aa14.44□□□□□ -0.1
SHMT2-209ENST00000553949 HMGB1P09429 215 aaKnown RBP14.43□□□□□ -0.1
SHMT2-209ENST00000553949 GJA5P36382 358 aa14.43□□□□□ -0.1
SHMT2-209ENST00000553949 HTRA3P83110 453 aa14.43□□□□□ -0.1
SHMT2-209ENST00000553949 ICA1Q05084 483 aa14.43□□□□□ -0.1
SHMT2-209ENST00000553949 PPIL2Q13356 520 aa14.43□□□□□ -0.1
SHMT2-209ENST00000553949 COL9A3Q14050 684 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms