RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 OVOS2A0A0J9YW53 1432 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 TECPR2O15040 1411 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 OVOS2Q6IE36 1432 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 NRXN1Q9ULB1 1477 aa8.76□□□□□ -1.01
ATXN3-223ENST00000553686 VPS8Q8N3P4 1428 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 METTL12A8MUP2 240 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
ATXN3-223ENST00000553686 F8W735 103 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-223ENST00000553686 SOX1O00570 391 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-223ENST00000553686 ARL4DP49703 201 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 IKBKEQ14164 716 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 FOXD4L6Q3SYB3 417 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-223ENST00000553686 FOXD4L3Q6VB84 417 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-223ENST00000553686 AEBP1Q8IUX7 1158 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 JMYQ8N9B5 988 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 NGDNQ8NEJ9 315 aaKnown RBP8.75□□□□□ -1.01
ATXN3-223ENST00000553686 TP53INP1Q96A56 240 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 CCDC74AQ96AQ1 378 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 ALKBH8Q96BT7 664 aaKnown RBP8.75□□□□□ -1.01
ATXN3-223ENST00000553686 SEMA6BQ9H3T3 888 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 OSGEPQ9NPF4 335 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 WWC3Q9ULE0 1092 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 PLCH1Q4KWH8 1693 aa8.75□□□□□ -1.01
ATXN3-223ENST00000553686 PLEKHH1Q9ULM0 1364 aa8.74□□□□□ -1.01
ATXN3-223ENST00000553686 TOMM70O94826 608 aa8.74□□□□□ -1.01
ATXN3-223ENST00000553686 DUOXA2Q1HG44 320 aa8.74□□□□□ -1.01
ATXN3-223ENST00000553686 RSPO4Q2I0M5 234 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-223ENST00000553686 HGSNATQ68CP4 663 aa8.74□□□□□ -1.01
ATXN3-223ENST00000553686 TMEM132EQ6IEE7 984 aa8.74□□□□□ -1.01
ATXN3-223ENST00000553686 CCNJLQ8IV13 435 aa8.74□□□□□ -1.01
ATXN3-223ENST00000553686 TCF12Q99081 682 aa8.74□□□□□ -1.01
ATXN3-223ENST00000553686 SSBP4Q9BWG4 385 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-223ENST00000553686 RREB1Q92766 1687 aa8.74□□□□□ -1.01
ATXN3-223ENST00000553686 NUP188Q5SRE5 1749 aa8.74□□□□□ -1.01
ATXN3-223ENST00000553686 A0A096LPE4 126 aa8.73□□□□□ -1.01
ATXN3-223ENST00000553686 A0A1W2PPZ6 126 aa8.73□□□□□ -1.01
ATXN3-223ENST00000553686 YBX3P16989 372 aaKnown RBP eCLIP8.73□□□□□ -1.01
ATXN3-223ENST00000553686 C19orf57Q0VDD7 668 aa8.73□□□□□ -1.01
ATXN3-223ENST00000553686 SPRED3Q2MJR0 410 aa8.73□□□□□ -1.01
ATXN3-223ENST00000553686 NKAPLQ5M9Q1 402 aa8.73□□□□□ -1.01
ATXN3-223ENST00000553686 AGGF1Q8N302 714 aaeCLIP8.73□□□□□ -1.01
ATXN3-223ENST00000553686 EHD4Q9H223 541 aa8.73□□□□□ -1.01
ATXN3-223ENST00000553686 NPHS2Q9NP85 383 aa8.73□□□□□ -1.01
ATXN3-223ENST00000553686 COL14A1Q05707 1796 aaKnown RBP8.73□□□□□ -1.01
ATXN3-223ENST00000553686 SSH2Q76I76 1423 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 CROCC2H7BZ55 1655 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 KIF1AQ12756 1690 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 GADD45BO75293 160 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-223ENST00000553686 WISP1O95388 367 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 GRIA4P48058 902 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 ACAD11Q709F0 780 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 PTF1AQ7RTS3 328 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 ZSCAN29Q8IWY8 852 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-223ENST00000553686 NLGN2Q8NFZ4 835 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 MEGF10Q96KG7 1140 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 ROCK1Q13464 1354 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 MYOM1P52179 1685 aa8.72□□□□□ -1.01
ATXN3-223ENST00000553686 ADAM11O75078 769 aa8.71□□□□□ -1.02
ATXN3-223ENST00000553686 NLRP12P59046 1061 aa8.71□□□□□ -1.02
ATXN3-223ENST00000553686 DSC3Q14574 896 aa8.71□□□□□ -1.02
ATXN3-223ENST00000553686 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.71□□□□□ -1.02
ATXN3-223ENST00000553686 EPS8L3Q8TE67 593 aaKnown RBP8.71□□□□□ -1.02
ATXN3-223ENST00000553686 FOXD4L4Q8WXT5 416 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-223ENST00000553686 POGKQ9P215 609 aa8.71□□□□□ -1.02
ATXN3-223ENST00000553686 E9PCH4 1651 aa8.71□□□□□ -1.02
ATXN3-223ENST00000553686 ANKRD30BQ9BXX2 1392 aa8.71□□□□□ -1.02
ATXN3-223ENST00000553686 CHD4Q14839 1912 aa8.7□□□□□ -1.02
ATXN3-223ENST00000553686 TREHO43280 583 aa8.7□□□□□ -1.02
ATXN3-223ENST00000553686 ESRRAP11474 423 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-223ENST00000553686 GLB1P16278 677 aa8.7□□□□□ -1.02
ATXN3-223ENST00000553686 SAFB2Q14151 953 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATXN3-223ENST00000553686 KIAA1211Q6ZU35 1233 aa8.7□□□□□ -1.02
ATXN3-223ENST00000553686 DZIP1LQ8IYY4 767 aaKnown RBP8.7□□□□□ -1.02
ATXN3-223ENST00000553686 UBASH3BQ8TF42 649 aa8.7□□□□□ -1.02
ATXN3-223ENST00000553686 ADGRF5Q8IZF2 1346 aa8.7□□□□□ -1.02
ATXN3-223ENST00000553686 ANKARQ7Z5J8 1434 aa8.7□□□□□ -1.02
ATXN3-223ENST00000553686 NRAPQ86VF7 1730 aa8.69□□□□□ -1.02
ATXN3-223ENST00000553686 H2AFB1P0C5Y9 115 aa8.69□□□□□ -1.02
ATXN3-223ENST00000553686 H2AFB2P0C5Z0 115 aa8.69□□□□□ -1.02
ATXN3-223ENST00000553686 ZNF423Q2M1K9 1284 aa8.69□□□□□ -1.02
ATXN3-223ENST00000553686 MARCH10Q8NA82 808 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-223ENST00000553686 PRAM1Q96QH2 718 aa8.69□□□□□ -1.02
ATXN3-223ENST00000553686 CLEC4MQ9H2X3 399 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-223ENST00000553686 EIF3AQ14152 1382 aaKnown RBP8.69□□□□□ -1.02
ATXN3-223ENST00000553686 BCL9O00512 1426 aa8.69□□□□□ -1.02
ATXN3-223ENST00000553686 SHANK3Q9BYB0 1731 aa8.68□□□□□ -1.02
ATXN3-223ENST00000553686 EXOC5O00471 708 aa8.68□□□□□ -1.02
ATXN3-223ENST00000553686 DYRK3O43781 588 aa8.68□□□□□ -1.02
ATXN3-223ENST00000553686 PCDH1Q08174 1060 aa8.68□□□□□ -1.02
ATXN3-223ENST00000553686 ASB16Q96NS5 453 aa8.68□□□□□ -1.02
ATXN3-223ENST00000553686 SOX17Q9H6I2 414 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-223ENST00000553686 NLRP2Q9NX02 1062 aa8.68□□□□□ -1.02
ATXN3-223ENST00000553686 CASZ1Q86V15 1759 aa8.68□□□□□ -1.02
ATXN3-223ENST00000553686 PNMA6FA0A0J9YX94 578 aa8.67□□□□□ -1.02
ATXN3-223ENST00000553686 ADCY9O60503 1353 aa8.67□□□□□ -1.02
ATXN3-223ENST00000553686 GSTM4Q03013 218 aa8.67□□□□□ -1.02
ATXN3-223ENST00000553686 NUTM2GQ5VZR2 741 aa8.67□□□□□ -1.02
ATXN3-223ENST00000553686 Q6ZS46 218 aa8.67□□□□□ -1.02
ATXN3-223ENST00000553686 TOM1L2Q6ZVM7 507 aa8.67□□□□□ -1.02
ATXN3-223ENST00000553686 UBL7Q96S82 380 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms