RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 IER5LQ5T953 404 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 CREB3L3Q68CJ9 461 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 ASTLQ6HA08 431 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-204ENST00000553335 KRT26Q7Z3Y9 468 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 ZFPM1Q8IX07 1006 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 CRACR2BQ8N4Y2 399 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-204ENST00000553335 CSRNP1Q96S65 589 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 C22orf23Q9BZE7 217 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 EHD4Q9H223 541 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 RNF41Q9H4P4 317 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-204ENST00000553335 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 ZNF287Q9HBT7 754 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 TRPM7Q96QT4 1865 aa11.55□□□□□ -0.56
TMEM260-204ENST00000553335 ATAD5Q96QE3 1844 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 CYP2D7A0A087X1C5 515 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 CYP21A2P08686 494 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 CYP2D6P10635 497 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 PCP11498 1178 aaKnown RBP11.54□□□□□ -0.56
TMEM260-204ENST00000553335 NF2P35240 595 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 PLCD1P51178 756 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 HAND2P61296 217 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 IRX5P78411 483 aaPredicted RBP11.54□□□□□ -0.56
TMEM260-204ENST00000553335 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 TRDNQ13061 729 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 DSG2Q14126 1118 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 KRT32Q14532 448 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 TMEM132AQ24JP5 1023 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 MFSD6Q6ZSS7 791 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 SH3BP5LQ7L8J4 393 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 USP48Q86UV5 1035 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 SWAP70Q9UH65 585 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 HERC5Q9UII4 1024 aaKnown RBP11.54□□□□□ -0.56
TMEM260-204ENST00000553335 SERPINB13Q9UIV8 391 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 SCAF8Q9UPN6 1271 aaKnown RBP11.54□□□□□ -0.56
TMEM260-204ENST00000553335 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
TMEM260-204ENST00000553335 ADM5C9JUS6 153 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 TBC1D12O60347 775 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 POTEIP0CG38 1075 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 NT5C2P49902 561 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 ANAPC15P60006 121 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 FOXK1P85037 733 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 AKNAD1Q5T1N1 836 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 DCAF15Q66K64 600 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 MAP1SQ66K74 1059 aaPredicted RBP11.53□□□□□ -0.56
TMEM260-204ENST00000553335 STK11IPQ8N1F8 1099 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 TEPSINQ96N21 525 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 GLIS2Q9BZE0 524 aaPredicted RBP11.53□□□□□ -0.56
TMEM260-204ENST00000553335 CNNM2Q9H8M5 875 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.53□□□□□ -0.56
TMEM260-204ENST00000553335 MKNK2Q9HBH9 465 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 TOMM22Q9NS69 142 aa11.53□□□□□ -0.56
TMEM260-204ENST00000553335 E7EWF7 191 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 PSMA5P28066 241 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 CDK8P49336 464 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 RBM25P49756 843 aaKnown RBP11.52□□□□□ -0.57
TMEM260-204ENST00000553335 TSGA10IPQ3SY00 556 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 NBPF12Q5TAG4 269 aaPredicted RBP11.52□□□□□ -0.57
TMEM260-204ENST00000553335 C16orf86Q6ZW13 317 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 RALYLQ86SE5 291 aaKnown RBP11.52□□□□□ -0.57
TMEM260-204ENST00000553335 METTL16Q86W50 562 aaKnown RBP11.52□□□□□ -0.57
TMEM260-204ENST00000553335 ZNF444Q8N0Y2 327 aaPredicted RBP11.52□□□□□ -0.57
TMEM260-204ENST00000553335 NCOA7Q8NI08 942 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 KCNB2Q92953 911 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 CDCA5Q96FF9 252 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 DYNLL2Q96FJ2 89 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 TMEM121BQ9BXQ6 578 aaPredicted RBP11.52□□□□□ -0.57
TMEM260-204ENST00000553335 KRT23Q9C075 422 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 SNX14Q9Y5W7 946 aa11.52□□□□□ -0.57
TMEM260-204ENST00000553335 PPP1R12BO60237 982 aaPredicted RBP11.51□□□□□ -0.57
TMEM260-204ENST00000553335 FGRP09769 529 aa11.51□□□□□ -0.57
TMEM260-204ENST00000553335 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
TMEM260-204ENST00000553335 GABPAQ06546 454 aa11.51□□□□□ -0.57
TMEM260-204ENST00000553335 RRP12Q5JTH9 1297 aaKnown RBP11.51□□□□□ -0.57
TMEM260-204ENST00000553335 PRAMEF18Q5VWM3 479 aa11.51□□□□□ -0.57
TMEM260-204ENST00000553335 RBM46Q8TBY0 533 aaKnown RBP11.51□□□□□ -0.57
TMEM260-204ENST00000553335 ESR2Q92731 530 aa11.51□□□□□ -0.57
TMEM260-204ENST00000553335 NEK1Q96PY6 1258 aa11.51□□□□□ -0.57
TMEM260-204ENST00000553335 ZNF341Q9BYN7 854 aa11.51□□□□□ -0.57
TMEM260-204ENST00000553335 DOCK1Q14185 1865 aa11.51□□□□□ -0.57
TMEM260-204ENST00000553335 ORC4O43929 436 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 ZMYND10O75800 440 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 HMGB1P09429 215 aaKnown RBP11.5□□□□□ -0.57
TMEM260-204ENST00000553335 APLP1P51693 650 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 TATDN1Q6P1N9 297 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 MIGA2Q7L4E1 593 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 TBC1D10CQ8IV04 446 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 CDAN1Q8IWY9 1227 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 SMC1BQ8NDV3 1235 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 CCDC17Q96LX7 622 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 TBC1D32Q96NH3 1257 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.5□□□□□ -0.57
TMEM260-204ENST00000553335 BOLA1Q9Y3E2 137 aa11.5□□□□□ -0.57
TMEM260-204ENST00000553335 TSPY2A6NKD2 308 aa11.49□□□□□ -0.57
TMEM260-204ENST00000553335 SPDYE16A6NNV3 312 aaPredicted RBP11.49□□□□□ -0.57
TMEM260-204ENST00000553335 SMIM22K7EJ46 135 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms