RNA–Protein interactions for RNA: ENST00000553314.1

TIMELESS-202, Transcript of timeless circadian regulator, humanhuman

TSL 3

Gene TIMELESS, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-202ENST00000553314 C11orf16Q9NQ32 467 aa9.17□□□□□ -0.94
TIMELESS-202ENST00000553314 FLRT1Q9NZU1 646 aa9.17□□□□□ -0.94
TIMELESS-202ENST00000553314 COG5Q9UP83 839 aa9.17□□□□□ -0.94
TIMELESS-202ENST00000553314 SUGT1Q9Y2Z0 365 aa9.17□□□□□ -0.94
TIMELESS-202ENST00000553314 PHIPQ8WWQ0 1821 aa9.17□□□□□ -0.94
TIMELESS-202ENST00000553314 LOC285556D6RIA3 1793 aa9.17□□□□□ -0.94
TIMELESS-202ENST00000553314 UTYO14607 1347 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 MROH5Q6ZUA9 1318 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 PTPRFP10586 1907 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 AK9Q5TCS8 1911 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 DDTLA6NHG4 134 aaPredicted RBP9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 ERC2O15083 957 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 PRDX5P30044 214 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 ATP2B2Q01814 1243 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 FLIIQ13045 1269 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 WDR43Q15061 677 aaKnown RBP eCLIP9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 CSPP1Q1MSJ5 1256 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 MORN1Q5T089 497 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 C1orf53Q5VUE5 145 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 USP6NLQ92738 828 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 KHSRPQ92945 711 aaKnown RBP eCLIP9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 TMOD4Q9NZQ9 345 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 MSRAQ9UJ68 235 aa9.16□□□□□ -0.94
TIMELESS-202ENST00000553314 APBB1O00213 710 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 ENTPD3O75355 529 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 SLC4A2P04920 1241 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 ZNF853P0CG23 659 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 ERVK-9P63128 1117 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 ERVK-24P63145 666 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 MAP2K5Q13163 448 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 RAB30Q15771 203 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 TRPV1Q8NER1 839 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 WDR66Q8TBY9 1149 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 CCER1Q8TC90 406 aaPredicted RBP9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 TSR2Q969E8 191 aaKnown RBP9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 EDC3Q96F86 508 aaKnown RBP9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 TBC1D2Q9BYX2 928 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 TMEM39AQ9NV64 488 aa9.15□□□□□ -0.94
TIMELESS-202ENST00000553314 GLRX3O76003 335 aaKnown RBP9.14□□□□□ -0.95
TIMELESS-202ENST00000553314 LDHBP07195 334 aaKnown RBP9.14□□□□□ -0.95
TIMELESS-202ENST00000553314 ALADP13716 330 aa9.14□□□□□ -0.95
TIMELESS-202ENST00000553314 CALD1Q05682 793 aaKnown RBP9.14□□□□□ -0.95
TIMELESS-202ENST00000553314 SNX17Q15036 470 aa9.14□□□□□ -0.95
TIMELESS-202ENST00000553314 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.14□□□□□ -0.951e-7■■■□□ 17.5
TIMELESS-202ENST00000553314 NKX2-4Q9H2Z4 354 aa9.14□□□□□ -0.95
TIMELESS-202ENST00000553314 SLC28A3Q9HAS3 691 aa9.14□□□□□ -0.95
TIMELESS-202ENST00000553314 DDX4Q9NQI0 724 aaKnown RBP9.14□□□□□ -0.95
TIMELESS-202ENST00000553314 IVNS1ABPQ9Y6Y0 642 aa9.14□□□□□ -0.95
TIMELESS-202ENST00000553314 DOCK3Q8IZD9 2030 aa9.14□□□□□ -0.95
TIMELESS-202ENST00000553314 RFX7Q2KHR2 1363 aa9.13□□□□□ -0.95
TIMELESS-202ENST00000553314 F6X3S4 739 aa9.13□□□□□ -0.95
TIMELESS-202ENST00000553314 CYBAP13498 195 aa9.13□□□□□ -0.95
TIMELESS-202ENST00000553314 Q3C1V9 767 aa9.13□□□□□ -0.95
TIMELESS-202ENST00000553314 LRRC24Q50LG9 513 aa9.13□□□□□ -0.95
TIMELESS-202ENST00000553314 GTF3C2Q8WUA4 911 aaPredicted RBP9.13□□□□□ -0.95
TIMELESS-202ENST00000553314 AS3MTQ9HBK9 375 aa9.13□□□□□ -0.95
TIMELESS-202ENST00000553314 C9orf78Q9NZ63 289 aaPredicted RBP9.13□□□□□ -0.95
TIMELESS-202ENST00000553314 RBPJLQ9UBG7 517 aa9.13□□□□□ -0.95
TIMELESS-202ENST00000553314 TRANK1O15050 2925 aa9.13□□□□□ -0.95
TIMELESS-202ENST00000553314 USP17L5A8MUK1 530 aa9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 GRM8O00222 908 aa9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 KIAA0355O15063 1070 aa9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 IFIT1P09914 478 aaKnown RBP9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 ACRP10323 421 aa9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 PUM3Q15397 648 aaKnown RBP9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 FAM47AQ5JRC9 791 aa9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 DZIP1Q86YF9 867 aaKnown RBP9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 SLC44A5Q8NCS7 719 aa9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 IDI2Q9BXS1 227 aa9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 MTIF3Q9H2K0 278 aaKnown RBP9.12□□□□□ -0.95
TIMELESS-202ENST00000553314 LRRC37A2A6NM11 1700 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 GTPBP6O43824 516 aaPredicted RBP9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 TLL1O43897 1013 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 PDE8BO95263 885 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 BTDP43251 543 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 CCNA1P78396 465 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 RRP1BQ14684 758 aaKnown RBP9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 LRRC41Q15345 812 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 TWISTNBQ3B726 338 aaPredicted RBP9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 SH3D19Q5HYK7 790 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 PPP2R2DQ66LE6 453 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 NPLOC4Q8TAT6 608 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 KLHDC4Q8TBB5 520 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 FBXL18Q96ME1 805 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 OSBPL5Q9H0X9 879 aaPredicted RBP9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 YBX2Q9Y2T7 364 aaKnown RBP9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 TCF20Q9UGU0 1960 aaKnown RBP9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 USP34Q70CQ2 3546 aa9.11□□□□□ -0.95
TIMELESS-202ENST00000553314 CFAP54Q96N23 3096 aa9.1□□□□□ -0.95
TIMELESS-202ENST00000553314 SLC15A5A6NIM6 579 aa9.1□□□□□ -0.95
TIMELESS-202ENST00000553314 SLC5A1P13866 664 aa9.1□□□□□ -0.95
TIMELESS-202ENST00000553314 PTPREP23469 700 aa9.1□□□□□ -0.95
TIMELESS-202ENST00000553314 CAP2P40123 477 aa9.1□□□□□ -0.95
TIMELESS-202ENST00000553314 BACE1P56817 501 aa9.1□□□□□ -0.95
TIMELESS-202ENST00000553314 MAP3K10Q02779 954 aa9.1□□□□□ -0.95
TIMELESS-202ENST00000553314 PPIGQ13427 754 aaKnown RBP eCLIP9.1□□□□□ -0.953e-10■■■□□ 17.7
TIMELESS-202ENST00000553314 ZYXQ15942 572 aaKnown RBP9.1□□□□□ -0.95
TIMELESS-202ENST00000553314 DPP9Q86TI2 863 aa9.1□□□□□ -0.95
TIMELESS-202ENST00000553314 VGLL2Q8N8G2 317 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms