RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SNCAIPQ9Y6H5 919 aa7.36□□□□□ -1.23
SCFD1-209ENST00000553280 TGFB1P01137 390 aa7.35□□□□□ -1.23
SCFD1-209ENST00000553280 POU4F3Q15319 338 aa7.35□□□□□ -1.23
SCFD1-209ENST00000553280 BEND4Q6ZU67 534 aa7.35□□□□□ -1.23
SCFD1-209ENST00000553280 CORO1BQ9BR76 489 aa7.35□□□□□ -1.23
SCFD1-209ENST00000553280 ST7Q9NRC1 585 aa7.35□□□□□ -1.23
SCFD1-209ENST00000553280 PCDHA4Q9UN74 947 aa7.35□□□□□ -1.23
SCFD1-209ENST00000553280 MEGF11A6BM72 1044 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 CCDC85CA6NKD9 419 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 GSC2O15499 205 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 PDPK1O15530 556 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 GRIN3BO60391 1043 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 CDK8P49336 464 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 NFIAQ12857 509 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 RASGRF1Q13972 1273 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 DNAJC7Q99615 494 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 TMPRSS13Q9BYE2 586 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 ZC3H12CQ9C0D7 883 aaKnown RBP7.34□□□□□ -1.23
SCFD1-209ENST00000553280 CCDC86Q9H6F5 360 aaKnown RBP7.34□□□□□ -1.23
SCFD1-209ENST00000553280 TACC3Q9Y6A5 838 aa7.34□□□□□ -1.23
SCFD1-209ENST00000553280 MEIS3P2A8K0S8 358 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 DRD2P14416 443 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 MAOBP27338 520 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 RXRBP28702 533 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 CHMP4BP1P59074 171 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 INPP5AQ14642 412 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 PPP2R5EQ16537 467 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 SGO2Q562F6 1265 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 PLEKHG4Q58EX7 1191 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 RNF43Q68DV7 783 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 HDXQ7Z353 690 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 SLC51AQ86UW1 340 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 CLEC10AQ8IUN9 316 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 LILRB2Q8N423 598 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 MICAL1Q8TDZ2 1067 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 ACSBG1Q96GR2 724 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 TM9SF2Q99805 663 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 FAM83CQ9BQN1 747 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 ANTXR1Q9H6X2 564 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 CYP4F12Q9HCS2 524 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 PCMTD2Q9NV79 361 aa7.33□□□□□ -1.24
SCFD1-209ENST00000553280 A0A1W2PQH9 124 aa7.32□□□□□ -1.24
SCFD1-209ENST00000553280 HTR3BO95264 441 aa7.32□□□□□ -1.24
SCFD1-209ENST00000553280 ECEL1O95672 775 aa7.32□□□□□ -1.24
SCFD1-209ENST00000553280 CTSBP07858 339 aa7.32□□□□□ -1.24
SCFD1-209ENST00000553280 MAP4P27816 1152 aaKnown RBP7.32□□□□□ -1.24
SCFD1-209ENST00000553280 IFRD2Q12894 506 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-209ENST00000553280 WIPI1Q5MNZ9 446 aaPredicted RBP7.32□□□□□ -1.24
SCFD1-209ENST00000553280 EXOSC6Q5RKV6 272 aaKnown RBP7.32□□□□□ -1.24
SCFD1-209ENST00000553280 LARP1BQ659C4 914 aaKnown RBP7.32□□□□□ -1.24
SCFD1-209ENST00000553280 RUFY4Q6ZNE9 571 aa7.32□□□□□ -1.24
SCFD1-209ENST00000553280 ZDHHC13Q8IUH4 622 aa7.32□□□□□ -1.24
SCFD1-209ENST00000553280 SH3TC2Q8TF17 1288 aa7.32□□□□□ -1.24
SCFD1-209ENST00000553280 PLPPR2Q96GM1 343 aa7.32□□□□□ -1.24
SCFD1-209ENST00000553280 MAPK8IP1Q9UQF2 711 aa7.32□□□□□ -1.24
SCFD1-209ENST00000553280 ZNF862O60290 1169 aa7.31□□□□□ -1.24
SCFD1-209ENST00000553280 MED26O95402 600 aa7.31□□□□□ -1.24
SCFD1-209ENST00000553280 GUCY2CP25092 1073 aa7.31□□□□□ -1.24
SCFD1-209ENST00000553280 HNRNPUQ00839 825 aaKnown RBP eCLIP7.31□□□□□ -1.24
SCFD1-209ENST00000553280 MLECQ14165 292 aa7.31□□□□□ -1.24
SCFD1-209ENST00000553280 INTS3Q68E01 1043 aaKnown RBP7.31□□□□□ -1.24
SCFD1-209ENST00000553280 LRFN4Q6PJG9 635 aa7.31□□□□□ -1.24
SCFD1-209ENST00000553280 CYFIP1Q7L576 1253 aa7.31□□□□□ -1.24
SCFD1-209ENST00000553280 TTC6Q86TZ1 520 aa7.31□□□□□ -1.24
SCFD1-209ENST00000553280 TAB3Q8N5C8 712 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-209ENST00000553280 SMG8Q8ND04 991 aaKnown RBP7.31□□□□□ -1.24
SCFD1-209ENST00000553280 TMEM40Q8WWA1 233 aa7.31□□□□□ -1.24
SCFD1-209ENST00000553280 DBNDD2Q9BQY9 259 aa7.31□□□□□ -1.24
SCFD1-209ENST00000553280 HIF3AQ9Y2N7 669 aa7.31□□□□□ -1.24
SCFD1-209ENST00000553280 TIAF1O95411 115 aa7.3□□□□□ -1.24
SCFD1-209ENST00000553280 GJB6O95452 261 aa7.3□□□□□ -1.24
SCFD1-209ENST00000553280 KIF4BQ2VIQ3 1234 aa7.3□□□□□ -1.24
SCFD1-209ENST00000553280 SHKBP1Q8TBC3 707 aa7.3□□□□□ -1.24
SCFD1-209ENST00000553280 MFSD14AQ96MC6 490 aa7.3□□□□□ -1.24
SCFD1-209ENST00000553280 PSMG3-AS1Q96PY0 264 aa7.3□□□□□ -1.24
SCFD1-209ENST00000553280 KANSL2Q9H9L4 492 aa7.3□□□□□ -1.24
SCFD1-209ENST00000553280 SUGCTQ9HAC7 445 aa7.3□□□□□ -1.24
SCFD1-209ENST00000553280 REV1Q9UBZ9 1251 aa7.3□□□□□ -1.24
SCFD1-209ENST00000553280 CORINQ9Y5Q5 1042 aa7.3□□□□□ -1.24
SCFD1-209ENST00000553280 SLC22A31A6NKX4 558 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 DDAH1O94760 285 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 LIG1P18858 919 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 USP11P51784 963 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 PDE4BQ07343 736 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 ZC3H12AQ5D1E8 599 aaKnown RBP7.29□□□□□ -1.24
SCFD1-209ENST00000553280 TMEM201Q5SNT2 666 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 HP1BP3Q5SSJ5 553 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-209ENST00000553280 RNF187Q5TA31 235 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-209ENST00000553280 CDPF1Q6NVV7 123 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 FAM178BQ8IXR5 827 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 FBLIM1Q8WUP2 373 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 ATG4CQ96DT6 458 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 WDR89Q96FK6 387 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-209ENST00000553280 GMIPQ9P107 970 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 SLC12A7Q9Y666 1083 aa7.29□□□□□ -1.24
SCFD1-209ENST00000553280 SYNGAP1Q96PV0 1343 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 WDR64B1ANS9 1081 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 COBLO75128 1261 aa7.28□□□□□ -1.24
SCFD1-209ENST00000553280 CDC45O75419 566 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms