RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 TBC1D9Q6ZT07 1266 aa10.65□□□□□ -0.7
TMEM116-217ENST00000552801 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.7
TMEM116-217ENST00000552801 TRMT2AQ8IZ69 625 aaKnown RBP10.65□□□□□ -0.7
TMEM116-217ENST00000552801 PROCA1Q8NCQ7 364 aaPredicted RBP10.65□□□□□ -0.7
TMEM116-217ENST00000552801 ZNF280CQ8ND82 737 aa10.65□□□□□ -0.7
TMEM116-217ENST00000552801 U2AF1L4Q8WU68 220 aaKnown RBP10.65□□□□□ -0.7
TMEM116-217ENST00000552801 CLUAP1Q96AJ1 413 aa10.65□□□□□ -0.7
TMEM116-217ENST00000552801 DDX4Q9NQI0 724 aaKnown RBP10.65□□□□□ -0.7
TMEM116-217ENST00000552801 HMG20BQ9P0W2 317 aa10.65□□□□□ -0.7
TMEM116-217ENST00000552801 HERC5Q9UII4 1024 aaKnown RBP10.65□□□□□ -0.7
TMEM116-217ENST00000552801 ADGRA2Q96PE1 1338 aa10.65□□□□□ -0.7
TMEM116-217ENST00000552801 FAM196BA6NMK8 535 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 USP17L5A8MUK1 530 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 EVI5O60447 810 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 HLA-DOAP06340 250 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 ELNP15502 786 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 HMGCS2P54868 508 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 MTX1Q13505 466 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 MOGSQ13724 837 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 SH3BP5LQ7L8J4 393 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 PXYLP1Q8TE99 480 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 NSUN4Q96CB9 384 aaKnown RBP10.65□□□□□ -0.71
TMEM116-217ENST00000552801 DEFB118Q96PH6 123 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 UNC93B1Q9H1C4 597 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 DHX36Q9H2U1 1008 aaKnown RBP10.65□□□□□ -0.71
TMEM116-217ENST00000552801 PI4KBQ9UBF8 816 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 GABRQQ9UN88 632 aa10.65□□□□□ -0.71
TMEM116-217ENST00000552801 ATAD5Q96QE3 1844 aa10.64□□□□□ -0.71
TMEM116-217ENST00000552801 PTPRFP10586 1907 aa10.64□□□□□ -0.71
TMEM116-217ENST00000552801 ATRNL1Q5VV63 1379 aa10.64□□□□□ -0.71
TMEM116-217ENST00000552801 SGPL1O95470 568 aa10.64□□□□□ -0.71
TMEM116-217ENST00000552801 TRIM27P14373 513 aa10.64□□□□□ -0.71
TMEM116-217ENST00000552801 FXR1P51114 621 aaKnown RBP eCLIP10.64□□□□□ -0.71
TMEM116-217ENST00000552801 MAP3K10Q02779 954 aa10.64□□□□□ -0.71
TMEM116-217ENST00000552801 IRF5Q13568 498 aa10.64□□□□□ -0.71
TMEM116-217ENST00000552801 FAM110CQ1W6H9 321 aa10.64□□□□□ -0.71
TMEM116-217ENST00000552801 ZKSCAN2Q63HK3 967 aa10.64□□□□□ -0.71
TMEM116-217ENST00000552801 CCDC84Q86UT8 332 aaPredicted RBP10.64□□□□□ -0.71
TMEM116-217ENST00000552801 AATFQ9NY61 560 aaKnown RBP eCLIP10.64□□□□□ -0.71
TMEM116-217ENST00000552801 CENPFP49454 3210 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 RFX7Q2KHR2 1363 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 HTTP42858 3142 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 SURF6O75683 361 aaKnown RBP10.63□□□□□ -0.71
TMEM116-217ENST00000552801 ASNSP08243 561 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 ARID4AP29374 1257 aaPredicted RBP10.63□□□□□ -0.71
TMEM116-217ENST00000552801 CAP2P40123 477 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 RHBDL3P58872 404 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 PDE3AQ14432 1141 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 TREML2Q5T2D2 321 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 PI16Q6UXB8 463 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 SHISA4Q96DD7 197 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 SNRKQ9NRH2 765 aa10.63□□□□□ -0.71
TMEM116-217ENST00000552801 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.63□□□□□ -0.71
TMEM116-217ENST00000552801 COL2A1P02458 1487 aaPredicted RBP10.62□□□□□ -0.71
TMEM116-217ENST00000552801 PHIPQ8WWQ0 1821 aa10.62□□□□□ -0.71
TMEM116-217ENST00000552801 HMGCRP04035 888 aa10.62□□□□□ -0.71
TMEM116-217ENST00000552801 MCAMP43121 646 aa10.62□□□□□ -0.71
TMEM116-217ENST00000552801 NECAB2Q7Z6G3 386 aa10.62□□□□□ -0.71
TMEM116-217ENST00000552801 MAPKAPK5Q8IW41 473 aa10.62□□□□□ -0.71
TMEM116-217ENST00000552801 ITPRIPQ8IWB1 547 aa10.62□□□□□ -0.71
TMEM116-217ENST00000552801 SH3RF3Q8TEJ3 882 aaPredicted RBP10.62□□□□□ -0.71
TMEM116-217ENST00000552801 TGFBRAP1Q8WUH2 860 aa10.62□□□□□ -0.71
TMEM116-217ENST00000552801 FEZ1Q99689 392 aa10.62□□□□□ -0.71
TMEM116-217ENST00000552801 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
TMEM116-217ENST00000552801 MAST2Q6P0Q8 1798 aa10.61□□□□□ -0.71
TMEM116-217ENST00000552801 PNMA6EA0A0J9YXQ4 647 aa10.61□□□□□ -0.71
TMEM116-217ENST00000552801 BCAR3O75815 825 aa10.61□□□□□ -0.71
TMEM116-217ENST00000552801 SLURP2P0DP57 97 aa10.61□□□□□ -0.71
TMEM116-217ENST00000552801 USP5P45974 858 aa10.61□□□□□ -0.71
TMEM116-217ENST00000552801 MTMR2Q13614 643 aa10.61□□□□□ -0.71
TMEM116-217ENST00000552801 TNNI3KQ59H18 835 aa10.61□□□□□ -0.71
TMEM116-217ENST00000552801 CERS3Q8IU89 383 aa10.61□□□□□ -0.71
TMEM116-217ENST00000552801 FOXP4Q8IVH2 680 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-217ENST00000552801 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.61□□□□□ -0.71
TMEM116-217ENST00000552801 ASCC2Q9H1I8 757 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-217ENST00000552801 GINM1Q9NU53 330 aa10.61□□□□□ -0.71
TMEM116-217ENST00000552801 FPGT-TNNI3KV9GXZ4 949 aa10.61□□□□□ -0.71
TMEM116-217ENST00000552801 C19orf81C9J6K1 198 aa10.6□□□□□ -0.71
TMEM116-217ENST00000552801 USP17L10C9JJH3 530 aa10.6□□□□□ -0.71
TMEM116-217ENST00000552801 IGSF3O75054 1194 aa10.6□□□□□ -0.71
TMEM116-217ENST00000552801 IDH1O75874 414 aaKnown RBP10.6□□□□□ -0.71
TMEM116-217ENST00000552801 BACE1P56817 501 aa10.6□□□□□ -0.71
TMEM116-217ENST00000552801 TMEM92Q6UXU6 159 aa10.6□□□□□ -0.71
TMEM116-217ENST00000552801 TRMT44Q8IYL2 757 aaKnown RBP10.6□□□□□ -0.71
TMEM116-217ENST00000552801 TMEM57Q8N5G2 664 aa10.6□□□□□ -0.71
TMEM116-217ENST00000552801 GPRC5AQ8NFJ5 357 aa10.6□□□□□ -0.71
TMEM116-217ENST00000552801 GTF3C2Q8WUA4 911 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-217ENST00000552801 NUDT12Q9BQG2 462 aa10.6□□□□□ -0.71
TMEM116-217ENST00000552801 GPR108Q9NPR9 543 aa10.6□□□□□ -0.71
TMEM116-217ENST00000552801 SAP30BPQ9UHR5 308 aaKnown RBP10.6□□□□□ -0.71
TMEM116-217ENST00000552801 LOC285556D6RIA3 1793 aa10.6□□□□□ -0.71
TMEM116-217ENST00000552801 FLT1P17948 1338 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 ZBTB7BO15156 539 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-217ENST00000552801 GLRX3O76003 335 aaKnown RBP10.59□□□□□ -0.71
TMEM116-217ENST00000552801 GDF11O95390 407 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 CYP2B6P20813 491 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 CYP7A1P22680 504 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 WDR78Q5VTH9 848 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 ANKLE1Q8NAG6 615 aa10.59□□□□□ -0.71
TMEM116-217ENST00000552801 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms