RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 CCDC196A0A1B0GTZ2 297 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 DDAH1O94760 285 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 HLA-DOAP06340 250 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 CALM1P0DP23 149 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 CALM2P0DP24 149 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 CALM3P0DP25 149 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 FDPSP14324 419 aaKnown RBP14.82□□□□□ -0.04
CACNB3-223ENST00000552480 RXRAP19793 462 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 ADD1P35611 737 aaKnown RBP14.82□□□□□ -0.04
CACNB3-223ENST00000552480 TFAP4Q01664 338 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 GABPAQ06546 454 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 RTN1Q16799 776 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 CDC37L1Q7L3B6 337 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 CATIPQ7Z7H3 387 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 SLC44A5Q8NCS7 719 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 RGS22Q8NE09 1264 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 JDP2Q8WYK2 163 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 ANKS1AQ92625 1134 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 ORC3Q9UBD5 711 aaPredicted RBP14.82□□□□□ -0.04
CACNB3-223ENST00000552480 PCDHAC2Q9Y5I4 1007 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 STK36Q9NRP7 1315 aa14.82□□□□□ -0.04
CACNB3-223ENST00000552480 COL2A1P02458 1487 aaPredicted RBP14.82□□□□□ -0.04
CACNB3-223ENST00000552480 H3BQV1 296 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 TSPY3P0CV98 308 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 TSPY8P0CW00 308 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 NFIAQ12857 509 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 NTRK3Q16288 839 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 IFFO2Q5TF58 517 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 CIAPIN1Q6FI81 312 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 DGKHQ86XP1 1220 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 CCDC144CPQ8IYA2 1237 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 EHD4Q9H223 541 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 SWAP70Q9UH65 585 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 TAOK2Q9UL54 1235 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 PLIN4Q96Q06 1357 aa14.81□□□□□ -0.04
CACNB3-223ENST00000552480 NMT2O60551 498 aa14.8□□□□□ -0.04
CACNB3-223ENST00000552480 IFNAR1P17181 557 aa14.8□□□□□ -0.04
CACNB3-223ENST00000552480 CXCL9Q07325 125 aa14.8□□□□□ -0.04
CACNB3-223ENST00000552480 TNIP1Q15025 636 aa14.8□□□□□ -0.04
CACNB3-223ENST00000552480 RCSD1Q6JBY9 416 aa14.8□□□□□ -0.04
CACNB3-223ENST00000552480 FANCBQ8NB91 859 aa14.8□□□□□ -0.04
CACNB3-223ENST00000552480 NUP133Q8WUM0 1156 aa14.8□□□□□ -0.04
CACNB3-223ENST00000552480 DHX36Q9H2U1 1008 aaKnown RBP14.8□□□□□ -0.04
CACNB3-223ENST00000552480 IL17RBQ9NRM6 502 aa14.8□□□□□ -0.04
CACNB3-223ENST00000552480 RBM28Q9NW13 759 aaKnown RBP14.8□□□□□ -0.04
CACNB3-223ENST00000552480 FAM198AQ9UFP1 575 aa14.8□□□□□ -0.04
CACNB3-223ENST00000552480 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 SIPA1L1O43166 1804 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 ENTPD3O75355 529 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 FMNL1O95466 1100 aaPredicted RBP14.79□□□□□ -0.04
CACNB3-223ENST00000552480 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 MMP14P50281 582 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 RASSF7Q02833 373 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 SSRP1Q08945 709 aaKnown RBP14.79□□□□□ -0.04
CACNB3-223ENST00000552480 RESTQ13127 1097 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 SKOR2Q2VWA4 1001 aaPredicted RBP14.79□□□□□ -0.04
CACNB3-223ENST00000552480 OGFOD1Q8N543 542 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 MTMR14Q8NCE2 650 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 NEDD1Q8NHV4 660 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 PRMT6Q96LA8 375 aaPredicted RBP14.79□□□□□ -0.04
CACNB3-223ENST00000552480 ZSCAN16Q9H4T2 348 aaPredicted RBP14.79□□□□□ -0.04
CACNB3-223ENST00000552480 TDRD3Q9H7E2 651 aaKnown RBP14.79□□□□□ -0.04
CACNB3-223ENST00000552480 KAT14Q9H8E8 782 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 LMBRD1Q9NUN5 540 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 SERPINB13Q9UIV8 391 aa14.79□□□□□ -0.04
CACNB3-223ENST00000552480 TRAK2O60296 914 aa14.78□□□□□ -0.04
CACNB3-223ENST00000552480 PPFIA3O75145 1194 aa14.78□□□□□ -0.04
CACNB3-223ENST00000552480 CACNB3P54284 484 aa14.78□□□□□ -0.04
CACNB3-223ENST00000552480 TROAPQ12815 778 aa14.78□□□□□ -0.04
CACNB3-223ENST00000552480 DLGAP5Q15398 846 aa14.78□□□□□ -0.04
CACNB3-223ENST00000552480 WASF1Q92558 559 aa14.78□□□□□ -0.04
CACNB3-223ENST00000552480 CHAMP1Q96JM3 812 aa14.78□□□□□ -0.04
CACNB3-223ENST00000552480 C8orf76Q96K31 380 aa14.78□□□□□ -0.04
CACNB3-223ENST00000552480 MAP3K14Q99558 947 aa14.78□□□□□ -0.04
CACNB3-223ENST00000552480 TMOD2Q9NZR1 351 aa14.78□□□□□ -0.04
CACNB3-223ENST00000552480 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
CACNB3-223ENST00000552480 ATRNL1Q5VV63 1379 aa14.77□□□□□ -0.04
CACNB3-223ENST00000552480 MYH8P13535 1937 aa14.77□□□□□ -0.04
CACNB3-223ENST00000552480 RPS12P25398 132 aaKnown RBP14.77□□□□□ -0.05
CACNB3-223ENST00000552480 FOSBP53539 338 aa14.77□□□□□ -0.05
CACNB3-223ENST00000552480 NBPF11Q86T75 865 aa14.77□□□□□ -0.05
CACNB3-223ENST00000552480 FERMT3Q86UX7 667 aa14.77□□□□□ -0.05
CACNB3-223ENST00000552480 ZFPM1Q8IX07 1006 aa14.77□□□□□ -0.05
CACNB3-223ENST00000552480 TRIM22Q8IYM9 498 aa14.77□□□□□ -0.05
CACNB3-223ENST00000552480 TMEM87AQ8NBN3 555 aa14.77□□□□□ -0.05
CACNB3-223ENST00000552480 CTCFLQ8NI51 663 aaPredicted RBP14.77□□□□□ -0.05
CACNB3-223ENST00000552480 PHKBQ93100 1093 aa14.77□□□□□ -0.05
CACNB3-223ENST00000552480 ALG1Q9BT22 464 aa14.77□□□□□ -0.05
CACNB3-223ENST00000552480 SLC26A6Q9BXS9 759 aa14.77□□□□□ -0.05
CACNB3-223ENST00000552480 PRPF40AO75400 957 aaKnown RBP14.76□□□□□ -0.05
CACNB3-223ENST00000552480 SHMT1P34896 483 aa14.76□□□□□ -0.05
CACNB3-223ENST00000552480 NOVP48745 357 aa14.76□□□□□ -0.05
CACNB3-223ENST00000552480 TCP10Q12799 353 aa14.76□□□□□ -0.05
CACNB3-223ENST00000552480 FOXD4L6Q3SYB3 417 aaPredicted RBP14.76□□□□□ -0.05
CACNB3-223ENST00000552480 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
CACNB3-223ENST00000552480 FOXD4L3Q6VB84 417 aaPredicted RBP14.76□□□□□ -0.05
CACNB3-223ENST00000552480 SH3BP5LQ7L8J4 393 aa14.76□□□□□ -0.05
CACNB3-223ENST00000552480 CRACR2BQ8N4Y2 399 aaPredicted RBP14.76□□□□□ -0.05
CACNB3-223ENST00000552480 PNMA1Q8ND90 353 aa14.76□□□□□ -0.05
CACNB3-223ENST00000552480 FBXO18Q8NFZ0 1043 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms