RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 PSME4Q14997 1843 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 CCDC196A0A1B0GTZ2 297 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 KIF28PB7ZC32 967 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 G3V3G9 751 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 GUCY1A2P33402 732 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 AOC3Q16853 763 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 DCAF8Q5TAQ9 597 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 C16orf86Q6ZW13 317 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 TTLL6Q8N841 843 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
PFDN5-216ENST00000552341 TSPY2A6NKD2 308 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 POLR3DP05423 398 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-216ENST00000552341 DPEP1P16444 411 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 RASA1P20936 1047 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 SCNN1DP51172 638 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 TFAP4Q01664 338 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 KIF23Q02241 960 aaPredicted RBP12.62□□□□□ -0.39
PFDN5-216ENST00000552341 SSRP1Q08945 709 aaKnown RBP12.62□□□□□ -0.39
PFDN5-216ENST00000552341 KRT40Q6A162 431 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 ATL3Q6DD88 541 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 CMTR1Q8N1G2 835 aaKnown RBP12.62□□□□□ -0.39
PFDN5-216ENST00000552341 NUP133Q8WUM0 1156 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 PGBD1Q96JS3 809 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 SPATA32Q96LK8 384 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 USP28Q96RU2 1077 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 SLC26A6Q9BXS9 759 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 FTOQ9C0B1 505 aaKnown RBP eCLIP12.62□□□□□ -0.39
PFDN5-216ENST00000552341 DDX4Q9NQI0 724 aaKnown RBP12.62□□□□□ -0.39
PFDN5-216ENST00000552341 TCP11L1Q9NUJ3 509 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 RCOR1Q9UKL0 485 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 MYH6P13533 1939 aa12.62□□□□□ -0.39
PFDN5-216ENST00000552341 YDJCA8MPS7 323 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 DDAH1O94760 285 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 XRCC6P12956 609 aaKnown RBP eCLIP12.61□□□□□ -0.39
PFDN5-216ENST00000552341 CDK8P49336 464 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 CATIPQ7Z7H3 387 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 DGKHQ86XP1 1220 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 AMOTL1Q8IY63 956 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 TEKT1Q969V4 418 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 CFAP45Q9UL16 551 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 COL4A5P29400 1685 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 USP17L3A6NCW0 530 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 USP17L4A6NCW7 530 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 CRKP46108 304 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 GABPAQ06546 454 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 L1TD1Q5T7N2 865 aaKnown RBP12.61□□□□□ -0.39
PFDN5-216ENST00000552341 CDC42EP5Q6NZY7 148 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 USP17L1Q7RTZ2 530 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 ZDHHC15Q96MV8 337 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 PSMD1Q99460 953 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 MKNK2Q9HBH9 465 aa12.61□□□□□ -0.39
PFDN5-216ENST00000552341 SYCE3A1L190 88 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 PLEKHA8P1O95397 391 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 CALM1P0DP23 149 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 CALM2P0DP24 149 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 CALM3P0DP25 149 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 U2AF2P26368 475 aaKnown RBP eCLIP12.6□□□□□ -0.392e-15■■■■■ 33.6
PFDN5-216ENST00000552341 HDLBPQ00341 1268 aaKnown RBP12.6□□□□□ -0.39
PFDN5-216ENST00000552341 BRAPQ7Z569 592 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 CCDC82Q8N4S0 544 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 SUPT20HQ8NEM7 779 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 SHISA4Q96DD7 197 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 RNF26Q9BY78 433 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-216ENST00000552341 USP40Q9NVE5 1235 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 PCDHAC2Q9Y5I4 1007 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 BRCA1P38398 1863 aaKnown RBP12.6□□□□□ -0.39
PFDN5-216ENST00000552341 DEXIO95424 95 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 PKN1Q16512 942 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 MYSM1Q5VVJ2 828 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 KIAA0825Q8IV33 1275 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 ZNF396Q96N95 335 aaPredicted RBP12.6□□□□□ -0.39
PFDN5-216ENST00000552341 GRPEL1Q9HAV7 217 aa12.6□□□□□ -0.39
PFDN5-216ENST00000552341 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
PFDN5-216ENST00000552341 ZBTB7AO95365 584 aa12.59□□□□□ -0.39
PFDN5-216ENST00000552341 NOVP48745 357 aa12.59□□□□□ -0.39
PFDN5-216ENST00000552341 MRE11P49959 708 aa12.59□□□□□ -0.39
PFDN5-216ENST00000552341 CCDC93Q567U6 631 aa12.59□□□□□ -0.39
PFDN5-216ENST00000552341 LRSAM1Q6UWE0 723 aa12.59□□□□□ -0.39
PFDN5-216ENST00000552341 TRIM22Q8IYM9 498 aa12.59□□□□□ -0.39
PFDN5-216ENST00000552341 RTKN2Q8IZC4 609 aa12.59□□□□□ -0.39
PFDN5-216ENST00000552341 ZNF444Q8N0Y2 327 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-216ENST00000552341 WASF1Q92558 559 aa12.59□□□□□ -0.39
PFDN5-216ENST00000552341 SYAP1Q96A49 352 aaPredicted RBP12.59□□□□□ -0.39
PFDN5-216ENST00000552341 RTEL1Q9NZ71 1219 aa12.59□□□□□ -0.39
PFDN5-216ENST00000552341 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 PRPF3O43395 683 aaKnown RBP12.58□□□□□ -0.4
PFDN5-216ENST00000552341 TSPY3P0CV98 308 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 TSPY8P0CW00 308 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 LIG1P18858 919 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 CEBPZQ03701 1054 aaKnown RBP12.58□□□□□ -0.4
PFDN5-216ENST00000552341 NFIAQ12857 509 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 PICALMQ13492 652 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 CCDC183Q5T5S1 534 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 SRBD1Q8N5C6 995 aaKnown RBP12.58□□□□□ -0.4
PFDN5-216ENST00000552341 NEDD1Q8NHV4 660 aa12.58□□□□□ -0.4
PFDN5-216ENST00000552341 MAP3K14Q99558 947 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms