RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 STK3Q13188 491 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 LARGE1O95461 756 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 BRD1O95696 1058 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 PDE6BP35913 854 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 LEKR1Q6ZMV7 388 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 KAT2BQ92831 832 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 AATFQ9NY61 560 aaKnown RBP eCLIP24.06■■□□□ 1.44
NPAS3-210ENST00000551492 SMC2O95347 1197 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 GTF2IP78347 998 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 DPP8Q6V1X1 898 aaPredicted RBP24.06■■□□□ 1.44
NPAS3-210ENST00000551492 AIDAQ96BJ3 306 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 EPC1Q9H2F5 836 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 MRVI1Q9Y6F6 885 aa24.06■■□□□ 1.44
NPAS3-210ENST00000551492 NPR1P16066 1061 aa24.05■■□□□ 1.44
NPAS3-210ENST00000551492 TRDNQ13061 729 aa24.05■■□□□ 1.44
NPAS3-210ENST00000551492 SKIDA1Q1XH10 827 aa24.05■■□□□ 1.44
NPAS3-210ENST00000551492 MASTLQ96GX5 879 aa24.05■■□□□ 1.44
NPAS3-210ENST00000551492 PCDHAC2Q9Y5I4 1007 aa24.05■■□□□ 1.44
NPAS3-210ENST00000551492 RPS6KL1Q9Y6S9 549 aa24.05■■□□□ 1.44
NPAS3-210ENST00000551492 BBOX1O75936 387 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 HOXA10P31260 410 aaPredicted RBP24.04■■□□□ 1.44
NPAS3-210ENST00000551492 MAP3K12Q12852 859 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 CCDC144BQ3MJ40 725 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 CCDC144CPQ8IYA2 1237 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 NECAB1Q8N987 351 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 FUCA2Q9BTY2 467 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 TCRBV5S4A2TA0A5A2 114 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 HIP1O00291 1037 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 MECOMQ03112 1051 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 APPBP2Q92624 585 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 MIEF2Q96C03 454 aa24.04■■□□□ 1.44
NPAS3-210ENST00000551492 GNL3LQ9NVN8 582 aaKnown RBP24.04■■□□□ 1.44
NPAS3-210ENST00000551492 CTDSPL2Q05D32 466 aa24.03■■□□□ 1.44
NPAS3-210ENST00000551492 LUZP1Q86V48 1076 aa24.03■■□□□ 1.44
NPAS3-210ENST00000551492 CD209Q9NNX6 404 aa24.03■■□□□ 1.44
NPAS3-210ENST00000551492 IRAK4Q9NWZ3 460 aa24.03■■□□□ 1.44
NPAS3-210ENST00000551492 LRP5O75197 1615 aa24.03■■□□□ 1.44
NPAS3-210ENST00000551492 TPM1P09493 284 aa24.03■■□□□ 1.44
NPAS3-210ENST00000551492 AK2P54819 239 aa24.03■■□□□ 1.44
NPAS3-210ENST00000551492 NYAP1Q6ZVC0 841 aa24.03■■□□□ 1.44
NPAS3-210ENST00000551492 SLX4Q8IY92 1834 aa24.03■■□□□ 1.44
NPAS3-210ENST00000551492 SLURP2P0DP57 97 aa24.02■■□□□ 1.44
NPAS3-210ENST00000551492 TBC1D22AQ8WUA7 517 aa24.02■■□□□ 1.44
NPAS3-210ENST00000551492 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.02■■□□□ 1.44
NPAS3-210ENST00000551492 ATP6V0A2Q9Y487 856 aa24.02■■□□□ 1.44
NPAS3-210ENST00000551492 SCNN1DP51172 638 aa24.02■■□□□ 1.44
NPAS3-210ENST00000551492 CPLX2Q6PUV4 134 aaKnown RBP24.02■■□□□ 1.44
NPAS3-210ENST00000551492 EXOC4Q96A65 974 aa24.02■■□□□ 1.44
NPAS3-210ENST00000551492 TCHHQ07283 1943 aa24.02■■□□□ 1.44
NPAS3-210ENST00000551492 KLRG2A4D1S0 409 aaPredicted RBP24.02■■□□□ 1.43
NPAS3-210ENST00000551492 KIF3CO14782 793 aa24.02■■□□□ 1.43
NPAS3-210ENST00000551492 RGL2O15211 777 aa24.02■■□□□ 1.43
NPAS3-210ENST00000551492 CCT2P78371 535 aaKnown RBP24.02■■□□□ 1.43
NPAS3-210ENST00000551492 ARMC3Q5W041 872 aa24.02■■□□□ 1.43
NPAS3-210ENST00000551492 CRAMP1Q96RY5 1269 aa24.02■■□□□ 1.43
NPAS3-210ENST00000551492 G3V3G9 751 aa24.01■■□□□ 1.43
NPAS3-210ENST00000551492 TBC1D8O95759 1140 aa24.01■■□□□ 1.43
NPAS3-210ENST00000551492 CALRP27797 417 aaKnown RBP24.01■■□□□ 1.43
NPAS3-210ENST00000551492 AOC3Q16853 763 aa24.01■■□□□ 1.43
NPAS3-210ENST00000551492 DCAF8Q5TAQ9 597 aa24.01■■□□□ 1.43
NPAS3-210ENST00000551492 MYH13Q9UKX3 1938 aa24.01■■□□□ 1.43
NPAS3-210ENST00000551492 IVLP07476 585 aa24.01■■□□□ 1.43
NPAS3-210ENST00000551492 CHD4Q14839 1912 aa24■■□□□ 1.43
NPAS3-210ENST00000551492 MINDY4BA8MYZ0 360 aa24■■□□□ 1.43
NPAS3-210ENST00000551492 RNF20Q5VTR2 975 aa24■■□□□ 1.43
NPAS3-210ENST00000551492 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24■■□□□ 1.43
NPAS3-210ENST00000551492 JPH2Q9BR39 696 aaPredicted RBP24■■□□□ 1.43
NPAS3-210ENST00000551492 ZC3H12CQ9C0D7 883 aaKnown RBP24■■□□□ 1.43
NPAS3-210ENST00000551492 HELLSQ9NRZ9 838 aa24■■□□□ 1.43
NPAS3-210ENST00000551492 SCAF8Q9UPN6 1271 aaKnown RBP24■■□□□ 1.43
NPAS3-210ENST00000551492 RRP12Q5JTH9 1297 aaKnown RBP24■■□□□ 1.43
NPAS3-210ENST00000551492 EPB41L4AQ9HCS5 686 aaPredicted RBP24■■□□□ 1.43
NPAS3-210ENST00000551492 SLC4A4Q9Y6R1 1079 aa24■■□□□ 1.43
NPAS3-210ENST00000551492 H3BQF6 201 aa23.99■■□□□ 1.43
NPAS3-210ENST00000551492 PRDM1O75626 825 aa23.99■■□□□ 1.43
NPAS3-210ENST00000551492 ZKSCAN1P17029 563 aaPredicted RBP23.99■■□□□ 1.43
NPAS3-210ENST00000551492 NAA16Q6N069 864 aaPredicted RBP23.99■■□□□ 1.43
NPAS3-210ENST00000551492 TMX3Q96JJ7 454 aa23.99■■□□□ 1.43
NPAS3-210ENST00000551492 TACC3Q9Y6A5 838 aa23.99■■□□□ 1.43
NPAS3-210ENST00000551492 IRS2Q9Y4H2 1338 aa23.99■■□□□ 1.43
NPAS3-210ENST00000551492 ST18O60284 1047 aa23.99■■□□□ 1.43
NPAS3-210ENST00000551492 TTF1Q15361 905 aaPredicted RBP23.99■■□□□ 1.43
NPAS3-210ENST00000551492 TADA2BQ86TJ2 420 aa23.99■■□□□ 1.43
NPAS3-210ENST00000551492 STRBPQ96SI9 672 aaKnown RBP23.99■■□□□ 1.43
NPAS3-210ENST00000551492 MFSD14BQ5SR56 506 aa23.98■■□□□ 1.43
NPAS3-210ENST00000551492 RUFY3Q7L099 469 aa23.98■■□□□ 1.43
NPAS3-210ENST00000551492 SP8Q8IXZ3 490 aa23.98■■□□□ 1.43
NPAS3-210ENST00000551492 THOC1Q96FV9 657 aaKnown RBP23.98■■□□□ 1.43
NPAS3-210ENST00000551492 ZNF277Q9NRM2 450 aaPredicted RBP23.98■■□□□ 1.43
NPAS3-210ENST00000551492 CNPY2Q9Y2B0 182 aa23.98■■□□□ 1.43
NPAS3-210ENST00000551492 CPP00450 1065 aa23.98■■□□□ 1.43
NPAS3-210ENST00000551492 HNRNPH1P31943 449 aaKnown RBP23.98■■□□□ 1.43
NPAS3-210ENST00000551492 FBXW10Q5XX13 1052 aa23.98■■□□□ 1.43
NPAS3-210ENST00000551492 KCNV1Q6PIU1 500 aa23.98■■□□□ 1.43
NPAS3-210ENST00000551492 TRIM5Q9C035 493 aa23.98■■□□□ 1.43
NPAS3-210ENST00000551492 COL11A2P13942 1736 aaPredicted RBP23.98■■□□□ 1.43
NPAS3-210ENST00000551492 ZKSCAN3Q9BRR0 538 aa23.97■■□□□ 1.43
NPAS3-210ENST00000551492 LEMD3Q9Y2U8 911 aa23.97■■□□□ 1.43
NPAS3-210ENST00000551492 KCNA3P22001 575 aa23.97■■□□□ 1.43
NPAS3-210ENST00000551492 ALDH1B1P30837 517 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms