RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 DGKHQ86XP1 1220 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 STK11IPQ8N1F8 1099 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 NEDD1Q8NHV4 660 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 IGDCC4Q8TDY8 1250 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 BRF1Q92994 677 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 INCENPQ9NQS7 918 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 GINM1Q9NU53 330 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 GGA3Q9NZ52 723 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 TACC3Q9Y6A5 838 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 LAMA4Q16363 1823 aa12.22□□□□□ -0.45
NEK3-203ENST00000551355 PLIN4Q96Q06 1357 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 DDX60LQ5H9U9 1706 aaKnown RBP12.21□□□□□ -0.45
NEK3-203ENST00000551355 CCDC69A6NI79 296 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 SH2B2O14492 632 aaPredicted RBP12.21□□□□□ -0.45
NEK3-203ENST00000551355 DHX16O60231 1041 aaKnown RBP12.21□□□□□ -0.45
NEK3-203ENST00000551355 HSP90AA1P07900 732 aaKnown RBP12.21□□□□□ -0.45
NEK3-203ENST00000551355 SHMT1P34896 483 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 HIRAP54198 1017 aaPredicted RBP12.21□□□□□ -0.45
NEK3-203ENST00000551355 CACNB1Q02641 598 aaPredicted RBP12.21□□□□□ -0.45
NEK3-203ENST00000551355 PPP2R5BQ15173 497 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 SLC4A8Q2Y0W8 1093 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 CERKLQ49MI3 558 aaPredicted RBP12.21□□□□□ -0.45
NEK3-203ENST00000551355 DCAF15Q66K64 600 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 NFXL1Q6ZNB6 911 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 SULF1Q8IWU6 871 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 ANKS1AQ92625 1134 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 INTS4Q96HW7 963 aaKnown RBP12.21□□□□□ -0.45
NEK3-203ENST00000551355 TMX3Q96JJ7 454 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 TMEM39BQ9GZU3 492 aa12.21□□□□□ -0.45
NEK3-203ENST00000551355 TAF1DQ9H5J8 278 aaPredicted RBP12.21□□□□□ -0.45
NEK3-203ENST00000551355 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.21□□□□□ -0.45
NEK3-203ENST00000551355 NAV1Q8NEY1 1877 aa12.21□□□□□ -0.46
NEK3-203ENST00000551355 TNKSO95271 1327 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 CD2BP2O95400 341 aaKnown RBP12.2□□□□□ -0.46
NEK3-203ENST00000551355 CALM1P0DP23 149 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 CALM2P0DP24 149 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 CALM3P0DP25 149 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 VEGFAP15692 232 aaPredicted RBP12.2□□□□□ -0.46
NEK3-203ENST00000551355 IFIT1BQ5T764 474 aaKnown RBP12.2□□□□□ -0.46
NEK3-203ENST00000551355 CHST3Q7LGC8 479 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 SLC44A5Q8NCS7 719 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 TCEANC2Q96MN5 208 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 TEPSINQ96N21 525 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 LY9Q9HBG7 655 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 CABP5Q9NP86 173 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 TPCN1Q9ULQ1 816 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.2□□□□□ -0.46
NEK3-203ENST00000551355 SLC12A7Q9Y666 1083 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 FOCADQ5VW36 1801 aa12.2□□□□□ -0.46
NEK3-203ENST00000551355 CCDC196A0A1B0GTZ2 297 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 SMIM22K7EJ46 135 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 EVX2Q03828 476 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 CUL4AQ13619 759 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 SEC23AQ15436 765 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 FAM47AQ5JRC9 791 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 TMEM179Q6ZVK1 233 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 CATIPQ7Z7H3 387 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 ENAHQ8N8S7 591 aaPredicted RBP12.19□□□□□ -0.46
NEK3-203ENST00000551355 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 SLKQ9H2G2 1235 aaPredicted RBP12.19□□□□□ -0.46
NEK3-203ENST00000551355 KANSL2Q9H9L4 492 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 CWC22Q9HCG8 908 aaKnown RBP12.19□□□□□ -0.46
NEK3-203ENST00000551355 SYNPO2Q9UMS6 1093 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 LAMB1P07942 1786 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 ADAMTSL1Q8N6G6 1762 aa12.19□□□□□ -0.46
NEK3-203ENST00000551355 ECM29Q5VYK3 1845 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 KLF18A0A0U1RQI7 1052 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 PFKFB2O60825 505 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 DDAH1O94760 285 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 TTLL1O95922 423 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 PDIA4P13667 645 aaKnown RBP12.18□□□□□ -0.46
NEK3-203ENST00000551355 PDIA3P30101 505 aaKnown RBP12.18□□□□□ -0.46
NEK3-203ENST00000551355 NOVP48745 357 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 APOBRQ0VD83 1088 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 ABCB5Q2M3G0 1257 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 MAP3K14Q99558 947 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 LLPHQ9BRT6 129 aaKnown RBP12.18□□□□□ -0.46
NEK3-203ENST00000551355 ZNF341Q9BYN7 854 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 DNAJC18Q9H819 358 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 KAT14Q9H8E8 782 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 MTMR4Q9NYA4 1195 aa12.18□□□□□ -0.46
NEK3-203ENST00000551355 WDR90Q96KV7 1748 aa12.17□□□□□ -0.46
NEK3-203ENST00000551355 ASTN2O75129 1339 aaPredicted RBP12.17□□□□□ -0.46
NEK3-203ENST00000551355 IGKV6D-41A0A0C4DH26 115 aa12.17□□□□□ -0.46
NEK3-203ENST00000551355 POTECB2RU33 542 aa12.17□□□□□ -0.46
NEK3-203ENST00000551355 MPHOSPH10O00566 681 aaKnown RBP12.17□□□□□ -0.46
NEK3-203ENST00000551355 ZBTB43O43298 467 aa12.17□□□□□ -0.46
NEK3-203ENST00000551355 CTNND1O60716 968 aaKnown RBP12.17□□□□□ -0.46
NEK3-203ENST00000551355 ASNSP08243 561 aa12.17□□□□□ -0.46
NEK3-203ENST00000551355 TOP1P11387 765 aaKnown RBP12.17□□□□□ -0.46
NEK3-203ENST00000551355 AKR1B1P15121 316 aa12.17□□□□□ -0.46
NEK3-203ENST00000551355 NF2P35240 595 aa12.17□□□□□ -0.46
NEK3-203ENST00000551355 COL9A3Q14050 684 aaPredicted RBP12.17□□□□□ -0.46
NEK3-203ENST00000551355 ME3Q16798 604 aa12.17□□□□□ -0.46
NEK3-203ENST00000551355 CPLX2Q6PUV4 134 aaKnown RBP12.17□□□□□ -0.46
NEK3-203ENST00000551355 APOA5Q6Q788 366 aa12.17□□□□□ -0.46
NEK3-203ENST00000551355 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
NEK3-203ENST00000551355 CDC37L1Q7L3B6 337 aa12.17□□□□□ -0.46
NEK3-203ENST00000551355 KRT26Q7Z3Y9 468 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms