RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 TTF2Q9UNY4 1162 aaKnown RBP17.11■□□□□ 0.33
PDE1B-207ENST00000550620 RIPOR2Q9Y4F9 1068 aa17.11■□□□□ 0.33
PDE1B-207ENST00000550620 KCPQ6ZWJ8 1503 aa17.1■□□□□ 0.33
PDE1B-207ENST00000550620 COL18A1P39060 1754 aa17.1■□□□□ 0.33
PDE1B-207ENST00000550620 ZNF142P52746 1687 aaPredicted RBP17.1■□□□□ 0.33
PDE1B-207ENST00000550620 CTAGE9A4FU28 777 aa17.1■□□□□ 0.33
PDE1B-207ENST00000550620 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
PDE1B-207ENST00000550620 RBL2Q08999 1139 aa17.1■□□□□ 0.33
PDE1B-207ENST00000550620 RASGRP2Q7LDG7 609 aa17.1■□□□□ 0.33
PDE1B-207ENST00000550620 STRBPQ96SI9 672 aaKnown RBP17.1■□□□□ 0.33
PDE1B-207ENST00000550620 SYNRGQ9UMZ2 1314 aa17.1■□□□□ 0.33
PDE1B-207ENST00000550620 PATL2C9JE40 543 aaKnown RBP17.09■□□□□ 0.33
PDE1B-207ENST00000550620 LMAN1P49257 510 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 KIF4BQ2VIQ3 1234 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 RAD9BQ6WBX8 426 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 KIF6Q6ZMV9 814 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 PROSER2Q86WR7 435 aaPredicted RBP17.09■□□□□ 0.33
PDE1B-207ENST00000550620 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 MED15Q96RN5 788 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 ANKZF1Q9H8Y5 726 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 ZSWIM5Q9P217 1185 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 KCNJ14Q9UNX9 436 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 ERICH2A1L162 156 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 MFAP3LO75121 409 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 CHRNA2Q15822 529 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 BEND6Q5SZJ8 279 aaPredicted RBP17.09■□□□□ 0.33
PDE1B-207ENST00000550620 GRAMD1CQ8IYS0 662 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 CNNM1Q9NRU3 951 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 PUF60Q9UHX1 559 aaKnown RBP17.09■□□□□ 0.33
PDE1B-207ENST00000550620 FEZ2Q9UHY8 353 aaPredicted RBP17.09■□□□□ 0.33
PDE1B-207ENST00000550620 PCDHB6Q9Y5E3 794 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 MYH7P12883 1935 aa17.09■□□□□ 0.33
PDE1B-207ENST00000550620 UBR2Q8IWV8 1755 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 LRP6O75581 1613 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 H3BQF6 201 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 PBX1P40424 430 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 RCAN1P53805 252 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 ZNF569Q5MCW4 686 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 LEKR1Q6ZMV7 388 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 IFNL3Q8IZI9 196 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 IQUBQ8NA54 791 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 ZCRB1Q8TBF4 217 aaKnown RBP17.08■□□□□ 0.33
PDE1B-207ENST00000550620 MTA3Q9BTC8 594 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 IRX2Q9BZI1 471 aaPredicted RBP17.08■□□□□ 0.33
PDE1B-207ENST00000550620 CSRNP2Q9H175 543 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 AATFQ9NY61 560 aaKnown RBP eCLIP17.08■□□□□ 0.33
PDE1B-207ENST00000550620 ADD3Q9UEY8 706 aaKnown RBP17.08■□□□□ 0.33
PDE1B-207ENST00000550620 ECM29Q5VYK3 1845 aa17.08■□□□□ 0.33
PDE1B-207ENST00000550620 ITIH6Q6UXX5 1313 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 CDHR2Q9BYE9 1310 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 TCRBV5S4A2TA0A5A2 114 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 ANKRD18BA2A2Z9 1011 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 UBE2Q2LH0YL09 131 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 TEX33O43247 280 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 ITGA6P23229 1130 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 ARID4AP29374 1257 aaPredicted RBP17.08■□□□□ 0.32
PDE1B-207ENST00000550620 GUCY1A2P33402 732 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 PIP4K2BP78356 416 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 AKNAD1Q5T1N1 836 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 MFSD6Q6ZSS7 791 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 APTXQ7Z2E3 356 aaKnown RBP17.08■□□□□ 0.32
PDE1B-207ENST00000550620 TMTC2Q8N394 836 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 TRERF1Q96PN7 1200 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 MYO1AQ9UBC5 1043 aa17.08■□□□□ 0.32
PDE1B-207ENST00000550620 ADAMTSL3P82987 1691 aa17.07■□□□□ 0.32
PDE1B-207ENST00000550620 ACTN2P35609 894 aa17.07■□□□□ 0.32
PDE1B-207ENST00000550620 WTAPQ15007 396 aa17.07■□□□□ 0.32
PDE1B-207ENST00000550620 WHAMMP3Q1A5X7 153 aa17.07■□□□□ 0.32
PDE1B-207ENST00000550620 CDKAL1Q5VV42 579 aa17.07■□□□□ 0.32
PDE1B-207ENST00000550620 ACBD3Q9H3P7 528 aa17.07■□□□□ 0.32
PDE1B-207ENST00000550620 STRN4Q9NRL3 753 aa17.07■□□□□ 0.32
PDE1B-207ENST00000550620 WWC3Q9ULE0 1092 aa17.07■□□□□ 0.32
PDE1B-207ENST00000550620 IVLP07476 585 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 XBP1P17861 261 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 FECHP22830 423 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 MCM6Q14566 821 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 TMTC1Q8IUR5 882 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 CRACR2BQ8N4Y2 399 aaPredicted RBP17.06■□□□□ 0.32
PDE1B-207ENST00000550620 CPLX3Q8WVH0 158 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 GSDMAQ96QA5 445 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 NAPGQ99747 312 aaPredicted RBP17.06■□□□□ 0.32
PDE1B-207ENST00000550620 PDE11AQ9HCR9 933 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 CTAGE15A4D2H0 777 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 BMP15O95972 392 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 CTAGE8P0CG41 777 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 NR5A1Q13285 461 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 CUL4BQ13620 913 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 KLHL10Q6JEL2 608 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 CTAGE6Q86UF2 777 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 CTAGE4Q8IX94 777 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 EPB41L4AQ9HCS5 686 aaPredicted RBP17.06■□□□□ 0.32
PDE1B-207ENST00000550620 VPS18Q9P253 973 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 TNS2Q63HR2 1409 aa17.06■□□□□ 0.32
PDE1B-207ENST00000550620 TRIM75PA6NK02 468 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 PDE8BO95263 885 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 HSP90B2PQ58FF3 399 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 VGLL2Q8N8G2 317 aa17.05■□□□□ 0.32
PDE1B-207ENST00000550620 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms