RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 MPHOSPH10O00566 681 aaKnown RBP12.14□□□□□ -0.47
RAB5C-207ENST00000550504 GDF11O95390 407 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 HMGB1P09429 215 aaKnown RBP12.14□□□□□ -0.47
RAB5C-207ENST00000550504 AKR1B1P15121 316 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 MCM5P33992 734 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 ANTXR2P58335 489 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 TFAP4Q01664 338 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 PRKG1Q13976 671 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 SUPT20HL1Q3ZLR7 823 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 CDC37L1Q7L3B6 337 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 DHX32Q7L7V1 743 aaKnown RBP12.14□□□□□ -0.47
RAB5C-207ENST00000550504 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
RAB5C-207ENST00000550504 CDCA5Q96FF9 252 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 PDRG1Q9NUG6 133 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 FZD1Q9UP38 647 aa12.14□□□□□ -0.47
RAB5C-207ENST00000550504 MYH8P13535 1937 aa12.13□□□□□ -0.47
RAB5C-207ENST00000550504 TRAF5O00463 557 aa12.13□□□□□ -0.47
RAB5C-207ENST00000550504 TSPY3P0CV98 308 aa12.13□□□□□ -0.47
RAB5C-207ENST00000550504 TSPY8P0CW00 308 aa12.13□□□□□ -0.47
RAB5C-207ENST00000550504 FGD1P98174 961 aa12.13□□□□□ -0.47
RAB5C-207ENST00000550504 EXOSC10Q01780 885 aaKnown RBP12.13□□□□□ -0.47
RAB5C-207ENST00000550504 RRP1BQ14684 758 aaKnown RBP12.13□□□□□ -0.47
RAB5C-207ENST00000550504 SHROOM1Q2M3G4 852 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-207ENST00000550504 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-207ENST00000550504 DCAF15Q66K64 600 aa12.13□□□□□ -0.47
RAB5C-207ENST00000550504 TATDN1Q6P1N9 297 aa12.13□□□□□ -0.47
RAB5C-207ENST00000550504 NOL8Q76FK4 1167 aaKnown RBP12.13□□□□□ -0.47
RAB5C-207ENST00000550504 HOOK2Q96ED9 719 aa12.13□□□□□ -0.47
RAB5C-207ENST00000550504 RBM19Q9Y4C8 960 aaKnown RBP12.13□□□□□ -0.47
RAB5C-207ENST00000550504 SSC5DA1L4H1 1573 aa12.13□□□□□ -0.47
RAB5C-207ENST00000550504 IFIT3O14879 490 aaKnown RBP12.12□□□□□ -0.47
RAB5C-207ENST00000550504 TBC1D12O60347 775 aa12.12□□□□□ -0.47
RAB5C-207ENST00000550504 NMT2O60551 498 aa12.12□□□□□ -0.47
RAB5C-207ENST00000550504 NF2P35240 595 aa12.12□□□□□ -0.47
RAB5C-207ENST00000550504 AK2P54819 239 aa12.12□□□□□ -0.47
RAB5C-207ENST00000550504 FMR1Q06787 632 aaKnown RBP eCLIP12.12□□□□□ -0.47
RAB5C-207ENST00000550504 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
RAB5C-207ENST00000550504 Q6ZUG5 572 aa12.12□□□□□ -0.47
RAB5C-207ENST00000550504 TTC14Q96N46 770 aa12.12□□□□□ -0.47
RAB5C-207ENST00000550504 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
RAB5C-207ENST00000550504 UBAC1Q9BSL1 405 aa12.12□□□□□ -0.47
RAB5C-207ENST00000550504 ZNF408Q9H9D4 720 aa12.12□□□□□ -0.47
RAB5C-207ENST00000550504 GPHNQ9NQX3 736 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-207ENST00000550504 ST18O60284 1047 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 CD2BP2O95400 341 aaKnown RBP12.11□□□□□ -0.47
RAB5C-207ENST00000550504 GH2P01242 217 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 APLP1P51693 650 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 JAG1P78504 1218 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 ABCB5Q2M3G0 1257 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 TMEM67Q5HYA8 995 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 IQCA1Q86XH1 822 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 NEDD1Q8NHV4 660 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 CCDC17Q96LX7 622 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-207ENST00000550504 ZNF341Q9BYN7 854 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-207ENST00000550504 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 TNKSO95271 1327 aa12.11□□□□□ -0.47
RAB5C-207ENST00000550504 ERICH2A1L162 156 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 PHF20L1A8MW92 1017 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 SH2B2O14492 632 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-207ENST00000550504 TOMM70O94826 608 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 INPP5BP32019 993 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 TOB2Q14106 344 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-207ENST00000550504 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-207ENST00000550504 SEPT2Q15019 361 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 SART3Q15020 963 aaKnown RBP12.1□□□□□ -0.47
RAB5C-207ENST00000550504 CLEC10AQ8IUN9 316 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 IGDCC4Q8TDY8 1250 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 BRF1Q92994 677 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 TMEM87BQ96K49 555 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 WRNIP1Q96S55 665 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.1□□□□□ -0.47
RAB5C-207ENST00000550504 SENP2Q9HC62 589 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 CABP5Q9NP86 173 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 IL17RBQ9NRM6 502 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-207ENST00000550504 ANGEL1Q9UNK9 670 aaKnown RBP12.1□□□□□ -0.47
RAB5C-207ENST00000550504 WDR19Q8NEZ3 1342 aa12.1□□□□□ -0.47
RAB5C-207ENST00000550504 USP2O75604 605 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-207ENST00000550504 ANP32AP39687 249 aaKnown RBP12.09□□□□□ -0.47
RAB5C-207ENST00000550504 CAP2P40123 477 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 NT5C2P49902 561 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 ATP2B2Q01814 1243 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 APOBRQ0VD83 1088 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 WTAPQ15007 396 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 RAB3GAP1Q15042 981 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 NFXL1Q6ZNB6 911 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 TMEM179Q6ZVK1 233 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 MOB2Q70IA6 237 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 CCDC84Q86UT8 332 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-207ENST00000550504 ENAHQ8N8S7 591 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-207ENST00000550504 ZKSCAN4Q969J2 545 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-207ENST00000550504 CEP95Q96GE4 821 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 LY9Q9HBG7 655 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 ZBTB21Q9ULJ3 1066 aa12.09□□□□□ -0.47
RAB5C-207ENST00000550504 NAP1L2Q9ULW6 460 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-207ENST00000550504 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms