RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 KCNB2Q92953 911 aa25.01■■□□□ 1.59
CACNB3-210ENST00000548874 ZKSCAN4Q969J2 545 aaPredicted RBP25.01■■□□□ 1.59
CACNB3-210ENST00000548874 CCDC17Q96LX7 622 aa25.01■■□□□ 1.59
CACNB3-210ENST00000548874 MKNK2Q9HBH9 465 aa25.01■■□□□ 1.59
CACNB3-210ENST00000548874 CREBZFQ9NS37 354 aa25.01■■□□□ 1.59
CACNB3-210ENST00000548874 DOCK1Q14185 1865 aa25■■□□□ 1.59
CACNB3-210ENST00000548874 MYH8P13535 1937 aa25■■□□□ 1.59
CACNB3-210ENST00000548874 HUNKP57058 714 aa25■■□□□ 1.59
CACNB3-210ENST00000548874 RNF20Q5VTR2 975 aa25■■□□□ 1.59
CACNB3-210ENST00000548874 MFSD6Q6ZSS7 791 aa25■■□□□ 1.59
CACNB3-210ENST00000548874 GINM1Q9NU53 330 aa25■■□□□ 1.59
CACNB3-210ENST00000548874 SNCAIPQ9Y6H5 919 aa25■■□□□ 1.59
CACNB3-210ENST00000548874 GDF11O95390 407 aa24.99■■□□□ 1.59
CACNB3-210ENST00000548874 NEDD4P46934 1319 aa24.99■■□□□ 1.59
CACNB3-210ENST00000548874 SHROOM1Q2M3G4 852 aaPredicted RBP24.99■■□□□ 1.59
CACNB3-210ENST00000548874 TSGA10IPQ3SY00 556 aa24.99■■□□□ 1.59
CACNB3-210ENST00000548874 CLMNQ96JQ2 1002 aa24.99■■□□□ 1.59
CACNB3-210ENST00000548874 CSADQ9Y600 493 aa24.99■■□□□ 1.59
CACNB3-210ENST00000548874 AKR1B1P15121 316 aa24.98■■□□□ 1.59
CACNB3-210ENST00000548874 ABCB5Q2M3G0 1257 aa24.98■■□□□ 1.59
CACNB3-210ENST00000548874 STOX1Q6ZVD7 989 aa24.98■■□□□ 1.59
CACNB3-210ENST00000548874 RASEFQ8IZ41 740 aa24.98■■□□□ 1.59
CACNB3-210ENST00000548874 HHIPL1Q96JK4 782 aa24.98■■□□□ 1.59
CACNB3-210ENST00000548874 ZBTB21Q9ULJ3 1066 aa24.98■■□□□ 1.59
CACNB3-210ENST00000548874 ATAD5Q96QE3 1844 aa24.98■■□□□ 1.59
CACNB3-210ENST00000548874 PLIN4Q96Q06 1357 aa24.97■■□□□ 1.59
CACNB3-210ENST00000548874 GREB1LQ9C091 1923 aaPredicted RBP24.97■■□□□ 1.59
CACNB3-210ENST00000548874 E7EWF7 191 aa24.97■■□□□ 1.59
CACNB3-210ENST00000548874 ASNSP08243 561 aa24.97■■□□□ 1.59
CACNB3-210ENST00000548874 NT5C2P49902 561 aa24.97■■□□□ 1.59
CACNB3-210ENST00000548874 ZNF444Q8N0Y2 327 aaPredicted RBP24.97■■□□□ 1.59
CACNB3-210ENST00000548874 BACH2Q9BYV9 841 aa24.97■■□□□ 1.59
CACNB3-210ENST00000548874 ABT1Q9ULW3 272 aaKnown RBP24.97■■□□□ 1.59
CACNB3-210ENST00000548874 GH2P01242 217 aa24.96■■□□□ 1.59
CACNB3-210ENST00000548874 GUCY1A2P33402 732 aa24.96■■□□□ 1.59
CACNB3-210ENST00000548874 NKX2-3Q8TAU0 364 aa24.96■■□□□ 1.59
CACNB3-210ENST00000548874 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.96■■□□□ 1.59
CACNB3-210ENST00000548874 CNNM2Q9H8M5 875 aa24.96■■□□□ 1.59
CACNB3-210ENST00000548874 PTPRAP18433 802 aa24.95■■□□□ 1.58
CACNB3-210ENST00000548874 TMEM179Q6ZVK1 233 aa24.95■■□□□ 1.58
CACNB3-210ENST00000548874 NEDD1Q8NHV4 660 aa24.95■■□□□ 1.58
CACNB3-210ENST00000548874 KRT23Q9C075 422 aa24.95■■□□□ 1.58
CACNB3-210ENST00000548874 ELP3Q9H9T3 547 aa24.95■■□□□ 1.58
CACNB3-210ENST00000548874 CABP5Q9NP86 173 aa24.95■■□□□ 1.58
CACNB3-210ENST00000548874 PICK1Q9NRD5 415 aa24.95■■□□□ 1.58
CACNB3-210ENST00000548874 TOMM22Q9NS69 142 aa24.95■■□□□ 1.58
CACNB3-210ENST00000548874 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.95■■□□□ 1.58
CACNB3-210ENST00000548874 SPDYE5A6NIY4 337 aa24.94■■□□□ 1.58
CACNB3-210ENST00000548874 RASSF10A6NK89 507 aa24.94■■□□□ 1.58
CACNB3-210ENST00000548874 ZKSCAN1P17029 563 aaPredicted RBP24.94■■□□□ 1.58
CACNB3-210ENST00000548874 MCCP23508 829 aa24.94■■□□□ 1.58
CACNB3-210ENST00000548874 TFAP4Q01664 338 aa24.94■■□□□ 1.58
CACNB3-210ENST00000548874 FAM47AQ5JRC9 791 aa24.94■■□□□ 1.58
CACNB3-210ENST00000548874 RRP12Q5JTH9 1297 aaKnown RBP24.94■■□□□ 1.58
CACNB3-210ENST00000548874 RGMBQ6NW40 437 aa24.94■■□□□ 1.58
CACNB3-210ENST00000548874 SLC10A4Q96EP9 437 aa24.94■■□□□ 1.58
CACNB3-210ENST00000548874 SNX14Q9Y5W7 946 aa24.94■■□□□ 1.58
CACNB3-210ENST00000548874 IGKV6D-41A0A0C4DH26 115 aa24.93■■□□□ 1.58
CACNB3-210ENST00000548874 B4E1Z4 1266 aa24.93■■□□□ 1.58
CACNB3-210ENST00000548874 MPHOSPH10O00566 681 aaKnown RBP24.93■■□□□ 1.58
CACNB3-210ENST00000548874 RANBP6O60518 1105 aaKnown RBP24.93■■□□□ 1.58
CACNB3-210ENST00000548874 TSPY3P0CV98 308 aa24.93■■□□□ 1.58
CACNB3-210ENST00000548874 TSPY8P0CW00 308 aa24.93■■□□□ 1.58
CACNB3-210ENST00000548874 HSPA6P17066 643 aa24.93■■□□□ 1.58
CACNB3-210ENST00000548874 ERO1BQ86YB8 467 aa24.93■■□□□ 1.58
CACNB3-210ENST00000548874 ESR2Q92731 530 aa24.93■■□□□ 1.58
CACNB3-210ENST00000548874 PHIPQ8WWQ0 1821 aa24.92■■□□□ 1.58
CACNB3-210ENST00000548874 TSPY2A6NKD2 308 aa24.92■■□□□ 1.58
CACNB3-210ENST00000548874 KDM4AO75164 1064 aa24.92■■□□□ 1.58
CACNB3-210ENST00000548874 TRDNQ13061 729 aa24.92■■□□□ 1.58
CACNB3-210ENST00000548874 SEPT2Q15019 361 aa24.92■■□□□ 1.58
CACNB3-210ENST00000548874 NCOA7Q8NI08 942 aa24.92■■□□□ 1.58
CACNB3-210ENST00000548874 CNKSR2Q8WXI2 1034 aa24.92■■□□□ 1.58
CACNB3-210ENST00000548874 USP17L5A8MUK1 530 aa24.91■■□□□ 1.58
CACNB3-210ENST00000548874 PPATQ06203 517 aa24.91■■□□□ 1.58
CACNB3-210ENST00000548874 KRT32Q14532 448 aa24.91■■□□□ 1.58
CACNB3-210ENST00000548874 CCDC84Q86UT8 332 aaPredicted RBP24.91■■□□□ 1.58
CACNB3-210ENST00000548874 RASAL3Q86YV0 1011 aa24.91■■□□□ 1.58
CACNB3-210ENST00000548874 MB21D2Q8IYB1 491 aaPredicted RBP24.91■■□□□ 1.58
CACNB3-210ENST00000548874 OPTNQ96CV9 577 aa24.91■■□□□ 1.58
CACNB3-210ENST00000548874 WNK4Q96J92 1243 aa24.91■■□□□ 1.58
CACNB3-210ENST00000548874 TBC1D2Q9BYX2 928 aa24.91■■□□□ 1.58
CACNB3-210ENST00000548874 GJA5P36382 358 aa24.9■■□□□ 1.58
CACNB3-210ENST00000548874 ZNF157P51786 506 aaPredicted RBP24.9■■□□□ 1.58
CACNB3-210ENST00000548874 RAB3GAP1Q15042 981 aa24.9■■□□□ 1.58
CACNB3-210ENST00000548874 ADCK5Q3MIX3 580 aa24.9■■□□□ 1.58
CACNB3-210ENST00000548874 RALYLQ86SE5 291 aaKnown RBP24.9■■□□□ 1.58
CACNB3-210ENST00000548874 IL17RAQ96F46 866 aa24.9■■□□□ 1.58
CACNB3-210ENST00000548874 WDR18Q9BV38 432 aa24.9■■□□□ 1.58
CACNB3-210ENST00000548874 KANSL2Q9H9L4 492 aa24.9■■□□□ 1.58
CACNB3-210ENST00000548874 TCP11L1Q9NUJ3 509 aa24.9■■□□□ 1.58
CACNB3-210ENST00000548874 ZSWIM5Q9P217 1185 aa24.9■■□□□ 1.58
CACNB3-210ENST00000548874 ZHX2Q9Y6X8 837 aa24.9■■□□□ 1.58
CACNB3-210ENST00000548874 FAM155AB1AL88 458 aaPredicted RBP24.89■■□□□ 1.58
CACNB3-210ENST00000548874 SLC10A3P09131 477 aa24.89■■□□□ 1.58
CACNB3-210ENST00000548874 ANAPC15P60006 121 aa24.89■■□□□ 1.58
CACNB3-210ENST00000548874 PPIL2Q13356 520 aa24.89■■□□□ 1.58
CACNB3-210ENST00000548874 DEFB115Q30KQ5 88 aa24.89■■□□□ 1.58
CACNB3-210ENST00000548874 SPRYD7Q5W111 196 aa24.89■■□□□ 1.58
CACNB3-210ENST00000548874 CYB5R4Q7L1T6 521 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms