RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 DTNBO60941 627 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 BAG4O95429 457 aaKnown RBP13□□□□□ -0.33
SCN8A-205ENST00000548086 LARGE1O95461 756 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 POTEIP0CG38 1075 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 POTEJP0CG39 1038 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 MCM5P33992 734 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 SHMT1P34896 483 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 KLHL40Q2TBA0 621 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 EAPPQ56P03 285 aaPredicted RBP13□□□□□ -0.33
SCN8A-205ENST00000548086 FKBP1CQ5VVH2 108 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 MIGA2Q7L4E1 593 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 CRACR2BQ8N4Y2 399 aaPredicted RBP13□□□□□ -0.33
SCN8A-205ENST00000548086 KRT23Q9C075 422 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 DEFB129Q9H1M3 183 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 DHX36Q9H2U1 1008 aaKnown RBP13□□□□□ -0.33
SCN8A-205ENST00000548086 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
SCN8A-205ENST00000548086 PI4KBQ9UBF8 816 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 PGAP2Q9UHJ9 254 aa13□□□□□ -0.33
SCN8A-205ENST00000548086 SCN4AP35499 1836 aa12.99□□□□□ -0.33
SCN8A-205ENST00000548086 ORC4O43929 436 aa12.99□□□□□ -0.33
SCN8A-205ENST00000548086 HMGB1P09429 215 aaKnown RBP12.99□□□□□ -0.33
SCN8A-205ENST00000548086 FAM83AQ86UY5 434 aa12.99□□□□□ -0.33
SCN8A-205ENST00000548086 GAS2L3Q86XJ1 694 aa12.99□□□□□ -0.33
SCN8A-205ENST00000548086 ESR2Q92731 530 aa12.99□□□□□ -0.33
SCN8A-205ENST00000548086 BRF1Q92994 677 aa12.99□□□□□ -0.33
SCN8A-205ENST00000548086 TEPSINQ96N21 525 aa12.99□□□□□ -0.33
SCN8A-205ENST00000548086 FZD1Q9UP38 647 aa12.99□□□□□ -0.33
SCN8A-205ENST00000548086 TSPY2A6NKD2 308 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 NUCB2P80303 420 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 FGD1P98174 961 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 TFAP4Q01664 338 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 APOBRQ0VD83 1088 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 RAB11FIP4Q86YS3 637 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 CLEC10AQ8IUN9 316 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 CWC22Q9HCG8 908 aaKnown RBP12.98□□□□□ -0.33
SCN8A-205ENST00000548086 TPCN1Q9ULQ1 816 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 COL2A1P02458 1487 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-205ENST00000548086 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 HSP90AA1P07900 732 aaKnown RBP12.98□□□□□ -0.33
SCN8A-205ENST00000548086 AKR1B1P15121 316 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 TNNI2P48788 182 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 TNFAIP1Q13829 316 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 RRP1BQ14684 758 aaKnown RBP12.98□□□□□ -0.33
SCN8A-205ENST00000548086 NBPF12Q5TAG4 269 aaPredicted RBP12.98□□□□□ -0.33
SCN8A-205ENST00000548086 EHD4Q9H223 541 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 RRAGCQ9HB90 399 aa12.98□□□□□ -0.33
SCN8A-205ENST00000548086 IFIT3O14879 490 aaKnown RBP12.97□□□□□ -0.33
SCN8A-205ENST00000548086 PCP11498 1178 aaKnown RBP12.97□□□□□ -0.33
SCN8A-205ENST00000548086 CLCN1P35523 988 aa12.97□□□□□ -0.33
SCN8A-205ENST00000548086 JAG1P78504 1218 aa12.97□□□□□ -0.33
SCN8A-205ENST00000548086 APOBEC3FQ8IUX4 373 aaKnown RBP12.97□□□□□ -0.33
SCN8A-205ENST00000548086 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
SCN8A-205ENST00000548086 IGDCC4Q8TDY8 1250 aa12.97□□□□□ -0.33
SCN8A-205ENST00000548086 NMRK2Q9NPI5 230 aa12.97□□□□□ -0.33
SCN8A-205ENST00000548086 IL17RBQ9NRM6 502 aa12.97□□□□□ -0.33
SCN8A-205ENST00000548086 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
SCN8A-205ENST00000548086 TNKSO95271 1327 aa12.96□□□□□ -0.33
SCN8A-205ENST00000548086 IQCA1LA6NCM1 817 aa12.96□□□□□ -0.33
SCN8A-205ENST00000548086 SH2B2O14492 632 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-205ENST00000548086 GDF11O95390 407 aa12.96□□□□□ -0.33
SCN8A-205ENST00000548086 TSPY3P0CV98 308 aa12.96□□□□□ -0.33
SCN8A-205ENST00000548086 TSPY8P0CW00 308 aa12.96□□□□□ -0.33
SCN8A-205ENST00000548086 STK3Q13188 491 aa12.96□□□□□ -0.33
SCN8A-205ENST00000548086 TMEM67Q5HYA8 995 aa12.96□□□□□ -0.33
SCN8A-205ENST00000548086 USP50Q70EL3 339 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-205ENST00000548086 ENAHQ8N8S7 591 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-205ENST00000548086 TRIM34Q9BYJ4 488 aa12.96□□□□□ -0.33
SCN8A-205ENST00000548086 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.96□□□□□ -0.33
SCN8A-205ENST00000548086 LY9Q9HBG7 655 aa12.96□□□□□ -0.33
SCN8A-205ENST00000548086 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-205ENST00000548086 NAP1L2Q9ULW6 460 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-205ENST00000548086 RXRAP19793 462 aa12.96□□□□□ -0.34
SCN8A-205ENST00000548086 ME3Q16798 604 aa12.96□□□□□ -0.34
SCN8A-205ENST00000548086 METTL16Q86W50 562 aaKnown RBP12.96□□□□□ -0.34
SCN8A-205ENST00000548086 FOXP4Q8IVH2 680 aaPredicted RBP12.96□□□□□ -0.34
SCN8A-205ENST00000548086 NECAB1Q8N987 351 aa12.96□□□□□ -0.34
SCN8A-205ENST00000548086 DCPSQ96C86 337 aaKnown RBP12.96□□□□□ -0.34
SCN8A-205ENST00000548086 CHMP4CQ96CF2 233 aa12.96□□□□□ -0.34
SCN8A-205ENST00000548086 TMX3Q96JJ7 454 aa12.96□□□□□ -0.34
SCN8A-205ENST00000548086 ZSCAN10Q96SZ4 725 aaPredicted RBP12.96□□□□□ -0.34
SCN8A-205ENST00000548086 UBAC1Q9BSL1 405 aa12.96□□□□□ -0.34
SCN8A-205ENST00000548086 MYL10Q9BUA6 226 aa12.96□□□□□ -0.34
SCN8A-205ENST00000548086 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.96□□□□□ -0.34
SCN8A-205ENST00000548086 AGXT2Q9BYV1 514 aa12.96□□□□□ -0.34
SCN8A-205ENST00000548086 SWAP70Q9UH65 585 aa12.96□□□□□ -0.34
SCN8A-205ENST00000548086 SSC5DA1L4H1 1573 aa12.95□□□□□ -0.34
SCN8A-205ENST00000548086 GOLGA6L22H0YM25 854 aa12.95□□□□□ -0.34
SCN8A-205ENST00000548086 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
SCN8A-205ENST00000548086 SEC23AQ15436 765 aa12.95□□□□□ -0.34
SCN8A-205ENST00000548086 KRT26Q7Z3Y9 468 aa12.95□□□□□ -0.34
SCN8A-205ENST00000548086 ANGEL1Q9UNK9 670 aaKnown RBP12.95□□□□□ -0.34
SCN8A-205ENST00000548086 LIMCH1Q9UPQ0 1083 aa12.95□□□□□ -0.34
SCN8A-205ENST00000548086 WDR19Q8NEZ3 1342 aa12.95□□□□□ -0.34
SCN8A-205ENST00000548086 ZNF445P59923 1031 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 ST3GAL1Q11201 340 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 PRKG1Q13976 671 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 CERKLQ49MI3 558 aaPredicted RBP12.94□□□□□ -0.34
SCN8A-205ENST00000548086 TATDN1Q6P1N9 297 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 IQCA1Q86XH1 822 aa12.94□□□□□ -0.34
SCN8A-205ENST00000548086 TMEM87BQ96K49 555 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms