RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 PNMA6FA0A0J9YX94 578 aa5.37□□□□□ -1.55
HCFC2-203ENST00000547194 PRR33A8MZF0 331 aa5.37□□□□□ -1.55
HCFC2-203ENST00000547194 IGF2BP3O00425 579 aaKnown RBP eCLIP5.37□□□□□ -1.55
HCFC2-203ENST00000547194 HNRNPUQ00839 825 aaKnown RBP eCLIP5.37□□□□□ -1.55
HCFC2-203ENST00000547194 DTHD1Q6ZMT9 781 aa5.37□□□□□ -1.55
HCFC2-203ENST00000547194 UBE3DQ7Z6J8 389 aa5.37□□□□□ -1.55
HCFC2-203ENST00000547194 ASB16Q96NS5 453 aa5.37□□□□□ -1.55
HCFC2-203ENST00000547194 KCNC2Q96PR1 638 aa5.37□□□□□ -1.55
HCFC2-203ENST00000547194 ALPK1Q96QP1 1244 aa5.37□□□□□ -1.55
HCFC2-203ENST00000547194 PPP4R2Q9NY27 417 aa5.37□□□□□ -1.55
HCFC2-203ENST00000547194 GPN3Q9UHW5 284 aaPredicted RBP5.37□□□□□ -1.55
HCFC2-203ENST00000547194 CNOT6Q9ULM6 557 aaKnown RBP5.37□□□□□ -1.55
HCFC2-203ENST00000547194 RBAK-RBAKDNI3L0D1 243 aa5.36□□□□□ -1.55
HCFC2-203ENST00000547194 XRCC5P13010 732 aaKnown RBP5.36□□□□□ -1.55
HCFC2-203ENST00000547194 TRHRP34981 398 aaPredicted RBP5.36□□□□□ -1.55
HCFC2-203ENST00000547194 PPM1JQ5JR12 505 aa5.36□□□□□ -1.55
HCFC2-203ENST00000547194 RNF214Q8ND24 703 aa5.36□□□□□ -1.55
HCFC2-203ENST00000547194 STK35Q8TDR2 534 aa5.36□□□□□ -1.55
HCFC2-203ENST00000547194 MYLIPQ8WY64 445 aa5.36□□□□□ -1.55
HCFC2-203ENST00000547194 GZF1Q9H116 711 aaPredicted RBP5.36□□□□□ -1.55
HCFC2-203ENST00000547194 SEMA3GQ9NS98 782 aa5.36□□□□□ -1.55
HCFC2-203ENST00000547194 DNAJC25-GNG10A0A024R161 153 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 TRIM13O60858 407 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 CELA3BP08861 270 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 FGD1P98174 961 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 NFKB2Q00653 900 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 FMR1Q06787 632 aaKnown RBP eCLIP5.35□□□□□ -1.55
HCFC2-203ENST00000547194 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.35□□□□□ -1.55
HCFC2-203ENST00000547194 RALGPS1Q5JS13 557 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 TCERG1LQ5VWI1 586 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 MAP1SQ66K74 1059 aaPredicted RBP5.35□□□□□ -1.55
HCFC2-203ENST00000547194 TMEM132EQ6IEE7 984 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 ZNF605Q86T29 641 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 MARCH10Q8NA82 808 aaPredicted RBP5.35□□□□□ -1.55
HCFC2-203ENST00000547194 FBF1Q8TES7 1133 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 ACSBG1Q96GR2 724 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 BCO2Q9BYV7 579 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 TPX2Q9ULW0 747 aaKnown RBP5.35□□□□□ -1.55
HCFC2-203ENST00000547194 AKAP2Q9Y2D5 859 aa5.35□□□□□ -1.55
HCFC2-203ENST00000547194 ZBTB7CA1YPR0 619 aa5.34□□□□□ -1.55
HCFC2-203ENST00000547194 EOMESO95936 686 aa5.34□□□□□ -1.55
HCFC2-203ENST00000547194 DLG4P78352 724 aa5.34□□□□□ -1.55
HCFC2-203ENST00000547194 NXPE4Q6UWF7 544 aa5.34□□□□□ -1.55
HCFC2-203ENST00000547194 ZDHHC14Q8IZN3 488 aa5.34□□□□□ -1.55
HCFC2-203ENST00000547194 BAHD1Q8TBE0 780 aaPredicted RBP5.34□□□□□ -1.55
HCFC2-203ENST00000547194 SGPP1Q9BX95 441 aa5.34□□□□□ -1.55
HCFC2-203ENST00000547194 MCOLN1Q9GZU1 580 aa5.34□□□□□ -1.55
HCFC2-203ENST00000547194 KRT82Q9NSB4 513 aa5.34□□□□□ -1.55
HCFC2-203ENST00000547194 OTOL1A6NHN0 477 aaPredicted RBP5.33□□□□□ -1.56
HCFC2-203ENST00000547194 MAPK8P45983 427 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 PPP2R3AQ06190 1150 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 TRIM26Q12899 539 aaPredicted RBP5.33□□□□□ -1.56
HCFC2-203ENST00000547194 ALG1LQ6GMV1 187 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 MPRIPQ6WCQ1 1025 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 PDZD3Q86UT5 571 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 MFSD4AQ8N468 514 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 UBE2FQ969M7 185 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 CCDC120Q96HB5 630 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 SETDB2Q96T68 719 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 SRCIN1Q9C0H9 1055 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 RNF32Q9H0A6 362 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 TMEM39AQ9NV64 488 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 RTEL1Q9NZ71 1219 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 ZSWIM5Q9P217 1185 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 ADAMTS20P59510 1910 aa5.33□□□□□ -1.56
HCFC2-203ENST00000547194 DCDC2CA8MYV0 355 aa5.32□□□□□ -1.56
HCFC2-203ENST00000547194 GIPC1O14908 333 aa5.32□□□□□ -1.56
HCFC2-203ENST00000547194 ADRB1P08588 477 aa5.32□□□□□ -1.56
HCFC2-203ENST00000547194 ZC3H12AQ5D1E8 599 aaKnown RBP5.32□□□□□ -1.56
HCFC2-203ENST00000547194 CDC37L1Q7L3B6 337 aa5.32□□□□□ -1.56
HCFC2-203ENST00000547194 SULF2Q8IWU5 870 aa5.32□□□□□ -1.56
HCFC2-203ENST00000547194 CXorf38Q8TB03 319 aa5.32□□□□□ -1.56
HCFC2-203ENST00000547194 FEZF2Q8TBJ5 459 aa5.32□□□□□ -1.56
HCFC2-203ENST00000547194 GPBAR1Q8TDU6 330 aa5.32□□□□□ -1.56
HCFC2-203ENST00000547194 CBX8Q9HC52 389 aa5.32□□□□□ -1.56
HCFC2-203ENST00000547194 KCTD3Q9Y597 815 aa5.32□□□□□ -1.56
HCFC2-203ENST00000547194 SASH1O94885 1247 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 CBX7O95931 251 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 GSTT1P30711 240 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 ERVK-24P63145 666 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 ATP2B2Q01814 1243 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 ZNF385BQ569K4 471 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 DNAJC14Q6Y2X3 702 aaPredicted RBP5.31□□□□□ -1.56
HCFC2-203ENST00000547194 C12orf40Q86WS4 652 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 C3orf58Q8NDZ4 430 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 BORCS6Q96GS4 357 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 C19orf44Q9H6X5 657 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 MAPK8IP1Q9UQF2 711 aa5.31□□□□□ -1.56
HCFC2-203ENST00000547194 RFXAPO00287 272 aa5.3□□□□□ -1.56
HCFC2-203ENST00000547194 FBXO24O75426 580 aa5.3□□□□□ -1.56
HCFC2-203ENST00000547194 INSRRP14616 1297 aa5.3□□□□□ -1.56
HCFC2-203ENST00000547194 PUM1Q14671 1186 aaKnown RBP eCLIP5.3□□□□□ -1.56
HCFC2-203ENST00000547194 SSPNQ14714 243 aa5.3□□□□□ -1.56
HCFC2-203ENST00000547194 SFRP5Q5T4F7 317 aa5.3□□□□□ -1.56
HCFC2-203ENST00000547194 ARMCX6Q7L4S7 300 aa5.3□□□□□ -1.56
HCFC2-203ENST00000547194 GRIN3AQ8TCU5 1115 aa5.3□□□□□ -1.56
HCFC2-203ENST00000547194 XYLT2Q9H1B5 865 aa5.3□□□□□ -1.56
HCFC2-203ENST00000547194 SPG7Q9UQ90 795 aa5.3□□□□□ -1.56
HCFC2-203ENST00000547194 MYOCOSA0A1B0GUC4 107 aa5.29□□□□□ -1.56
HCFC2-203ENST00000547194 P4HBP07237 508 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms