RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 WDR66Q8TBY9 1149 aa12.21□□□□□ -0.45
R3HDM2-210ENST00000547019 ADAMTS19Q8TE59 1207 aa12.21□□□□□ -0.45
R3HDM2-210ENST00000547019 SOCS4Q8WXH5 440 aa12.21□□□□□ -0.45
R3HDM2-210ENST00000547019 TRIM43Q96BQ3 446 aaPredicted RBP12.21□□□□□ -0.45
R3HDM2-210ENST00000547019 ATP11BQ9Y2G3 1177 aa12.21□□□□□ -0.45
R3HDM2-210ENST00000547019 GAKO14976 1311 aa12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 PICALMQ13492 652 aa12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 SHROOM1Q2M3G4 852 aaPredicted RBP12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 RABL6Q3YEC7 729 aaPredicted RBP12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 GPR142Q7Z601 462 aa12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 ITPRIPQ8IWB1 547 aa12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 ZSCAN29Q8IWY8 852 aaPredicted RBP12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 ZNF280CQ8ND82 737 aa12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 MEIS3Q99687 375 aa12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 APBA2Q99767 749 aa12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 USP44Q9H0E7 712 aa12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 PDLIM7Q9NR12 457 aa12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 FOCADQ5VW36 1801 aa12.2□□□□□ -0.46
R3HDM2-210ENST00000547019 JAG1P78504 1218 aa12.19□□□□□ -0.46
R3HDM2-210ENST00000547019 PUM3Q15397 648 aaKnown RBP12.19□□□□□ -0.46
R3HDM2-210ENST00000547019 SH3D19Q5HYK7 790 aa12.19□□□□□ -0.46
R3HDM2-210ENST00000547019 TRPV1Q8NER1 839 aa12.19□□□□□ -0.46
R3HDM2-210ENST00000547019 NECAB3Q96P71 396 aaPredicted RBP12.19□□□□□ -0.46
R3HDM2-210ENST00000547019 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
R3HDM2-210ENST00000547019 PRDM5Q9NQX1 630 aaPredicted RBP12.19□□□□□ -0.46
R3HDM2-210ENST00000547019 RBPJLQ9UBG7 517 aa12.19□□□□□ -0.46
R3HDM2-210ENST00000547019 ZNF236Q9UL36 1845 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 SYNGAP1Q96PV0 1343 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 LDHBP07195 334 aaKnown RBP12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 GNAI3P08754 354 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 MS4A1P11836 297 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 RLBP1P12271 317 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 HERVK_113P62684 666 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 MTMR2Q13614 643 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 SNX17Q15036 470 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 TRIM60Q495X7 471 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 ZNF384Q8TF68 577 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 ASB2Q96Q27 587 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 PRKAG2Q9UGJ0 569 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 DDX20Q9UHI6 824 aaKnown RBP12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 HDAC5Q9UQL6 1122 aa12.18□□□□□ -0.46
R3HDM2-210ENST00000547019 SALL1Q9NSC2 1324 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 DNM1LO00429 736 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 IFIT1P09914 478 aaKnown RBP12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 DNAJB2P25686 324 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 RGS2P41220 211 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 RHBDL3P58872 404 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 ERVK-9P63128 1117 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 ERVK-24P63145 666 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 IRX3P78415 501 aaPredicted RBP12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 GJC2Q5T442 439 aaPredicted RBP12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 SLC39A5Q6ZMH5 540 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 PANK1Q8TE04 598 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 LPAR1Q92633 364 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 UHRF1Q96T88 793 aaPredicted RBP12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 OSBPL5Q9H0X9 879 aaPredicted RBP12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 NDUFB9Q9Y6M9 179 aa12.17□□□□□ -0.46
R3HDM2-210ENST00000547019 SMCHD1A6NHR9 2005 aa12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 TBC1D12O60347 775 aa12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 CNMDO75829 334 aa12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 IGHA2P01877 340 aa12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 MAPK4P31152 587 aa12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 CAP2P40123 477 aa12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 BTDP43251 543 aa12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 PHKA1P46020 1223 aa12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 TRMT44Q8IYL2 757 aaKnown RBP12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 GPRC5AQ8NFJ5 357 aa12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 RNPC3Q96LT9 517 aaKnown RBP12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 THEGQ9P2T0 379 aa12.16□□□□□ -0.46
R3HDM2-210ENST00000547019 A0A0G2JMZ2 1700 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 USP17L5A8MUK1 530 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 CYBAP13498 195 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 HOXA7P31268 230 aaPredicted RBP12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 CYP2C19P33261 490 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 RFX5P48382 616 aaPredicted RBP12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 MAP2K5Q13163 448 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 PABPC4Q13310 644 aaKnown RBP eCLIP12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 ADGRE1Q14246 886 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 PDE3AQ14432 1141 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 ANO1Q5XXA6 986 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 ATG9AQ7Z3C6 839 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 PLEKHH3Q7Z736 793 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 NPLOC4Q8TAT6 608 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 ATXN2LQ8WWM7 1075 aaKnown RBP12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 PAGR1Q9BTK6 254 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 ZNF576Q9H609 170 aa12.15□□□□□ -0.46
R3HDM2-210ENST00000547019 MYO5AQ9Y4I1 1855 aaKnown RBP12.14□□□□□ -0.47
R3HDM2-210ENST00000547019 GNAI2P04899 355 aa12.14□□□□□ -0.47
R3HDM2-210ENST00000547019 SLC5A1P13866 664 aa12.14□□□□□ -0.47
R3HDM2-210ENST00000547019 RRP1P56182 461 aaKnown RBP12.14□□□□□ -0.47
R3HDM2-210ENST00000547019 MVPQ14764 893 aaKnown RBP12.14□□□□□ -0.47
R3HDM2-210ENST00000547019 LPIN2Q92539 896 aa12.14□□□□□ -0.47
R3HDM2-210ENST00000547019 DNAJC18Q9H819 358 aa12.14□□□□□ -0.47
R3HDM2-210ENST00000547019 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
R3HDM2-210ENST00000547019 LRRC37A2A6NM11 1700 aa12.14□□□□□ -0.47
R3HDM2-210ENST00000547019 TRANK1O15050 2925 aa12.14□□□□□ -0.47
R3HDM2-210ENST00000547019 MROH7-TTC4A0A0A0MT08 1334 aa12.13□□□□□ -0.47
R3HDM2-210ENST00000547019 CNGA1P29973 690 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms