RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 SHISA4Q96DD7 197 aa22.81■■□□□ 1.24
CHPT1-202ENST00000546490 IL1RAPL2Q9NP60 686 aa22.81■■□□□ 1.24
CHPT1-202ENST00000546490 TMOD4Q9NZQ9 345 aa22.81■■□□□ 1.24
CHPT1-202ENST00000546490 ADCY3O60266 1144 aa22.8■■□□□ 1.24
CHPT1-202ENST00000546490 GDF11O95390 407 aa22.8■■□□□ 1.24
CHPT1-202ENST00000546490 IRF5Q13568 498 aa22.8■■□□□ 1.24
CHPT1-202ENST00000546490 RPAP2Q8IXW5 612 aaPredicted RBP22.8■■□□□ 1.24
CHPT1-202ENST00000546490 RNF208Q9H0X6 261 aa22.8■■□□□ 1.24
CHPT1-202ENST00000546490 ASCC2Q9H1I8 757 aaPredicted RBP22.8■■□□□ 1.24
CHPT1-202ENST00000546490 ANTXR1Q9H6X2 564 aa22.8■■□□□ 1.24
CHPT1-202ENST00000546490 ZBTB21Q9ULJ3 1066 aa22.8■■□□□ 1.24
CHPT1-202ENST00000546490 PLXNB2O15031 1838 aa22.8■■□□□ 1.24
CHPT1-202ENST00000546490 GJB1P08034 283 aa22.79■■□□□ 1.24
CHPT1-202ENST00000546490 GJA8P48165 433 aa22.79■■□□□ 1.24
CHPT1-202ENST00000546490 BACE1P56817 501 aa22.79■■□□□ 1.24
CHPT1-202ENST00000546490 IRX3P78415 501 aaPredicted RBP22.79■■□□□ 1.24
CHPT1-202ENST00000546490 TTF1Q15361 905 aaPredicted RBP22.79■■□□□ 1.24
CHPT1-202ENST00000546490 CLASRPQ8N2M8 674 aaKnown RBP22.79■■□□□ 1.24
CHPT1-202ENST00000546490 PXYLP1Q8TE99 480 aa22.79■■□□□ 1.24
CHPT1-202ENST00000546490 KIF1BPQ96EK5 621 aa22.79■■□□□ 1.24
CHPT1-202ENST00000546490 CHMP4BQ9H444 224 aaKnown RBP22.78■■□□□ 1.24
CHPT1-202ENST00000546490 COG6Q9Y2V7 657 aa22.78■■□□□ 1.24
CHPT1-202ENST00000546490 C19orf81C9J6K1 198 aa22.77■■□□□ 1.24
CHPT1-202ENST00000546490 USP17L10C9JJH3 530 aa22.77■■□□□ 1.24
CHPT1-202ENST00000546490 INHAP05111 366 aa22.77■■□□□ 1.24
CHPT1-202ENST00000546490 ELNP15502 786 aa22.77■■□□□ 1.24
CHPT1-202ENST00000546490 EHD4Q9H223 541 aa22.77■■□□□ 1.24
CHPT1-202ENST00000546490 SERPINB13Q9UIV8 391 aa22.77■■□□□ 1.24
CHPT1-202ENST00000546490 TAOK2Q9UL54 1235 aa22.77■■□□□ 1.24
CHPT1-202ENST00000546490 APBB1O00213 710 aa22.76■■□□□ 1.23
CHPT1-202ENST00000546490 JAG1P78504 1218 aa22.76■■□□□ 1.23
CHPT1-202ENST00000546490 SHROOM1Q2M3G4 852 aaPredicted RBP22.76■■□□□ 1.23
CHPT1-202ENST00000546490 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.76■■□□□ 1.23
CHPT1-202ENST00000546490 UNC93B1Q9H1C4 597 aa22.76■■□□□ 1.23
CHPT1-202ENST00000546490 ZBTB40Q9NUA8 1239 aa22.76■■□□□ 1.23
CHPT1-202ENST00000546490 IFIT2P09913 472 aaKnown RBP22.75■■□□□ 1.23
CHPT1-202ENST00000546490 HOXA7P31268 230 aaPredicted RBP22.75■■□□□ 1.23
CHPT1-202ENST00000546490 TTC6Q86TZ1 520 aa22.75■■□□□ 1.23
CHPT1-202ENST00000546490 CEP290O15078 2479 aa22.75■■□□□ 1.23
CHPT1-202ENST00000546490 U2AF1L4Q8WU68 220 aaKnown RBP22.74■■□□□ 1.23
CHPT1-202ENST00000546490 DNAJC2Q99543 621 aaKnown RBP22.74■■□□□ 1.23
CHPT1-202ENST00000546490 RIOK1Q9BRS2 568 aaKnown RBP22.74■■□□□ 1.23
CHPT1-202ENST00000546490 MORF4L1Q9UBU8 362 aa22.74■■□□□ 1.23
CHPT1-202ENST00000546490 RCAN3Q9UKA8 241 aa22.74■■□□□ 1.23
CHPT1-202ENST00000546490 BAZ2AQ9UIF9 1905 aaKnown RBP22.73■■□□□ 1.23
CHPT1-202ENST00000546490 MAGEB6P1A0A0J9YX57 407 aa22.73■■□□□ 1.23
CHPT1-202ENST00000546490 RAB11FIP3O75154 756 aa22.73■■□□□ 1.23
CHPT1-202ENST00000546490 GH2P01242 217 aa22.73■■□□□ 1.23
CHPT1-202ENST00000546490 PDE6AP16499 860 aa22.73■■□□□ 1.23
CHPT1-202ENST00000546490 TATDN1Q6P1N9 297 aa22.73■■□□□ 1.23
CHPT1-202ENST00000546490 HERVK_113P62684 666 aa22.72■■□□□ 1.23
CHPT1-202ENST00000546490 HABP4Q5JVS0 413 aaKnown RBP22.72■■□□□ 1.23
CHPT1-202ENST00000546490 SLC9C2Q5TAH2 1124 aa22.72■■□□□ 1.23
CHPT1-202ENST00000546490 USP17L2Q6R6M4 530 aa22.72■■□□□ 1.23
CHPT1-202ENST00000546490 SIRT2Q8IXJ6 389 aa22.72■■□□□ 1.23
CHPT1-202ENST00000546490 GTF3C2Q8WUA4 911 aaPredicted RBP22.72■■□□□ 1.23
CHPT1-202ENST00000546490 FEZ1Q99689 392 aa22.72■■□□□ 1.23
CHPT1-202ENST00000546490 HTATIP2Q9BUP3 242 aa22.72■■□□□ 1.23
CHPT1-202ENST00000546490 CRNKL1Q9BZJ0 848 aaKnown RBP22.72■■□□□ 1.23
CHPT1-202ENST00000546490 GOLIM4O00461 696 aa22.71■■□□□ 1.23
CHPT1-202ENST00000546490 FARP2O94887 1054 aaPredicted RBP22.71■■□□□ 1.23
CHPT1-202ENST00000546490 CAPN2P17655 700 aa22.71■■□□□ 1.23
CHPT1-202ENST00000546490 BCL11AQ9H165 835 aa22.71■■□□□ 1.23
CHPT1-202ENST00000546490 SGPL1O95470 568 aa22.7■■□□□ 1.22
CHPT1-202ENST00000546490 HMGCRP04035 888 aa22.7■■□□□ 1.22
CHPT1-202ENST00000546490 CERKLQ49MI3 558 aaPredicted RBP22.7■■□□□ 1.22
CHPT1-202ENST00000546490 UBE2Q1Q7Z7E8 422 aa22.7■■□□□ 1.22
CHPT1-202ENST00000546490 P2RX7Q99572 595 aaKnown RBP22.7■■□□□ 1.22
CHPT1-202ENST00000546490 ZNF532Q9HCE3 1301 aa22.7■■□□□ 1.22
CHPT1-202ENST00000546490 POLR3DP05423 398 aaPredicted RBP22.69■■□□□ 1.22
CHPT1-202ENST00000546490 RAB3GAP1Q15042 981 aa22.69■■□□□ 1.22
CHPT1-202ENST00000546490 ABCB5Q2M3G0 1257 aa22.69■■□□□ 1.22
CHPT1-202ENST00000546490 GPRC5AQ8NFJ5 357 aa22.69■■□□□ 1.22
CHPT1-202ENST00000546490 C12orf42Q96LP6 360 aa22.69■■□□□ 1.22
CHPT1-202ENST00000546490 DEFB118Q96PH6 123 aa22.69■■□□□ 1.22
CHPT1-202ENST00000546490 CABP5Q9NP86 173 aa22.69■■□□□ 1.22
CHPT1-202ENST00000546490 PAK6Q9NQU5 681 aaPredicted RBP22.69■■□□□ 1.22
CHPT1-202ENST00000546490 EMILIN3Q9NT22 766 aa22.69■■□□□ 1.22
CHPT1-202ENST00000546490 PCDH10Q9P2E7 1040 aa22.69■■□□□ 1.22
CHPT1-202ENST00000546490 ALPK3Q96L96 1907 aa22.69■■□□□ 1.22
CHPT1-202ENST00000546490 USP14P54578 494 aa22.68■■□□□ 1.22
CHPT1-202ENST00000546490 ZYXQ15942 572 aaKnown RBP22.68■■□□□ 1.22
CHPT1-202ENST00000546490 SOCS4Q8WXH5 440 aa22.68■■□□□ 1.22
CHPT1-202ENST00000546490 DPF3Q92784 378 aa22.68■■□□□ 1.22
CHPT1-202ENST00000546490 PAG1Q9NWQ8 432 aa22.68■■□□□ 1.22
CHPT1-202ENST00000546490 H0YGN5 161 aa22.67■■□□□ 1.22
CHPT1-202ENST00000546490 SHMT1P34896 483 aa22.67■■□□□ 1.22
CHPT1-202ENST00000546490 PLCD1P51178 756 aa22.67■■□□□ 1.22
CHPT1-202ENST00000546490 PDE3AQ14432 1141 aa22.67■■□□□ 1.22
CHPT1-202ENST00000546490 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.67■■□□□ 1.22
CHPT1-202ENST00000546490 TXNRD2Q9NNW7 524 aa22.67■■□□□ 1.22
CHPT1-202ENST00000546490 MCM9Q9NXL9 1143 aa22.67■■□□□ 1.22
CHPT1-202ENST00000546490 GJD2Q9UKL4 321 aa22.67■■□□□ 1.22
CHPT1-202ENST00000546490 FRMPD3Q5JV73 1810 aa22.66■■□□□ 1.22
CHPT1-202ENST00000546490 TCRBV5S4A2TA0A5A2 114 aa22.66■■□□□ 1.22
CHPT1-202ENST00000546490 TFRCP02786 760 aaKnown RBP22.66■■□□□ 1.22
CHPT1-202ENST00000546490 MAPK4P31152 587 aa22.66■■□□□ 1.22
CHPT1-202ENST00000546490 ERVK-9P63128 1117 aa22.66■■□□□ 1.22
CHPT1-202ENST00000546490 ERVK-24P63145 666 aa22.66■■□□□ 1.22
CHPT1-202ENST00000546490 CCAR1Q8IX12 1150 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms