RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ERVV-2B6SEH9 535 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 TUBBP07437 444 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 IFIT1P09914 478 aaKnown RBP7.45□□□□□ -1.22
SNHG1-225ENST00000545920 CEBPAP49715 358 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-225ENST00000545920 CBX1P83916 185 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 FOXO4P98177 505 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 AIMP1Q12904 312 aaKnown RBP7.45□□□□□ -1.22
SNHG1-225ENST00000545920 LRMPQ12912 555 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 SLC39A14Q15043 492 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 TTF1Q15361 905 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-225ENST00000545920 ATP2B3Q16720 1220 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 CCDC144BQ3MJ40 725 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 EPHA10Q5JZY3 1008 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 JAKMIP3Q5VZ66 844 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 KANK3Q6NY19 840 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 FAM173BQ6P4H8 233 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 STOX1Q6ZVD7 989 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 SND1Q7KZF4 910 aaKnown RBP eCLIP7.45□□□□□ -1.22
SNHG1-225ENST00000545920 UBE3BQ7Z3V4 1068 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 RALYLQ86SE5 291 aaKnown RBP7.45□□□□□ -1.22
SNHG1-225ENST00000545920 CCDC144CPQ8IYA2 1237 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 AOPEPQ8N6M6 819 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 TRIML1Q8N9V2 468 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 NCOA7Q8NI08 942 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 APPBP2Q92624 585 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 DDX11Q96FC9 970 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 DNAJC2Q99543 621 aaKnown RBP7.45□□□□□ -1.22
SNHG1-225ENST00000545920 MPHOSPH8Q99549 860 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.45□□□□□ -1.22
SNHG1-225ENST00000545920 GOLPH3LQ9H4A5 285 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 CEP126Q9P2H0 1117 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 NRBP1Q9UHY1 535 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 CHMP3Q9Y3E7 222 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 IVNS1ABPQ9Y6Y0 642 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 SCN11AQ9UI33 1791 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 STK36Q9NRP7 1315 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 NID2Q14112 1375 aa7.45□□□□□ -1.22
SNHG1-225ENST00000545920 ATRNO75882 1429 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 CPLX1O14810 134 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 ARHGAP6O43182 974 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 CUTAO60888 179 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 H2AFXP16104 143 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-225ENST00000545920 U2AF2P26368 475 aaKnown RBP eCLIP7.44□□□□□ -1.221e-18■■■■□ 21
SNHG1-225ENST00000545920 ETF1P62495 437 aaKnown RBP7.44□□□□□ -1.22
SNHG1-225ENST00000545920 MYL5Q02045 173 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 APOBRQ0VD83 1088 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 TRDNQ13061 729 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 ALX1Q15699 326 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 PTPRNQ16849 979 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 CCDC93Q567U6 631 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 ANO1Q5XXA6 986 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 LMBR1LQ6UX01 489 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 OLFM4Q6UX06 510 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 ATG9AQ7Z3C6 839 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 KRT28Q7Z3Y7 464 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 MB21D2Q8IYB1 491 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-225ENST00000545920 MSL3Q8N5Y2 521 aaKnown RBP7.44□□□□□ -1.22
SNHG1-225ENST00000545920 ZNF496Q96IT1 587 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-225ENST00000545920 TMEM87BQ96K49 555 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 TEX13AQ9BXU3 409 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-225ENST00000545920 TSPYL1Q9H0U9 437 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 DNAI1Q9UI46 699 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 GPSM3Q9Y4H4 160 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 V9GYY5 206 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-225ENST00000545920 MAST3O60307 1309 aa7.44□□□□□ -1.22
SNHG1-225ENST00000545920 LAMB4A4D0S4 1761 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 C1orf167Q5SNV9 1468 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 EFCAB8A8MWE9 144 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 PIK3CDO00329 1044 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 GOLIM4O00461 696 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 GDF9O60383 454 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 ZNF202O95125 648 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 JUNDP17535 347 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 CABP4P57796 275 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 KIF23Q02241 960 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-225ENST00000545920 PPP2R5BQ15173 497 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 TEX35Q5T0J7 233 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 ZNF697Q5TEC3 545 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 LIAT1Q6ZQX7 453 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 DDX46Q7L014 1031 aaKnown RBP7.43□□□□□ -1.22
SNHG1-225ENST00000545920 MPNDQ8N594 471 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 TCEANC2Q96MN5 208 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 TMX1Q9H3N1 280 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 C19orf44Q9H6X5 657 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 CALCOCO1Q9P1Z2 691 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 ORC3Q9UBD5 711 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-225ENST00000545920 ZNF215Q9UL58 517 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-225ENST00000545920 ZMIZ1Q9ULJ6 1067 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 HPSEQ9Y251 543 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 TAF6LQ9Y6J9 622 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 PKD1L3Q7Z443 1732 aa7.43□□□□□ -1.22
SNHG1-225ENST00000545920 USP17L3A6NCW0 530 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 USP17L4A6NCW7 530 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 ZNF213O14771 459 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 PRC1O43663 620 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 TLL1O43897 1013 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 STX10O60499 249 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 SMC2O95347 1197 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 BMP15O95972 392 aa7.42□□□□□ -1.22
SNHG1-225ENST00000545920 FDPSP14324 419 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms