RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 ALPK3Q96L96 1907 aa11.44□□□□□ -0.58
CIT-216ENST00000544872 CCL15-CCL14A0A0B4J2E2 113 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 TESPA1A2RU30 521 aaPredicted RBP11.43□□□□□ -0.58
CIT-216ENST00000544872 ENTPD3O75355 529 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 OSBPP22059 807 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 GJA5P36382 358 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 IREB2P48200 963 aaKnown RBP11.43□□□□□ -0.58
CIT-216ENST00000544872 MFAP1P55081 439 aaKnown RBP11.43□□□□□ -0.58
CIT-216ENST00000544872 PPP4CP60510 307 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 UBE3CQ15386 1083 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 CCL15Q16663 113 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 CDC42EP5Q6NZY7 148 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 KBTBD3Q8NAB2 608 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 FAM151AQ8WW52 585 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 RILPL2Q969X0 211 aa11.43□□□□□ -0.58
CIT-216ENST00000544872 ZBED3Q96IU2 234 aaPredicted RBP11.43□□□□□ -0.58
CIT-216ENST00000544872 LBHD1Q9BQE6 289 aaPredicted RBP11.43□□□□□ -0.58
CIT-216ENST00000544872 CRNKL1Q9BZJ0 848 aaKnown RBP11.43□□□□□ -0.58
CIT-216ENST00000544872 BDP1A6H8Y1 2624 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 ZSWIM8A7E2V4 1837 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 GAKO14976 1311 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 TLR2O60603 784 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 HLA-DOAP06340 250 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 PDE6AP16499 860 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 GNAT2P19087 354 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 GRIK5Q16478 980 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 SLAIN1Q8ND83 568 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 NECAB3Q96P71 396 aaPredicted RBP11.42□□□□□ -0.58
CIT-216ENST00000544872 DHX36Q9H2U1 1008 aaKnown RBP11.42□□□□□ -0.58
CIT-216ENST00000544872 TTYH1Q9H313 450 aaPredicted RBP11.42□□□□□ -0.58
CIT-216ENST00000544872 EPHX3Q9H6B9 360 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 ANTXR1Q9H6X2 564 aa11.42□□□□□ -0.58
CIT-216ENST00000544872 AATFQ9NY61 560 aaKnown RBP eCLIP11.42□□□□□ -0.58
CIT-216ENST00000544872 ZNF532Q9HCE3 1301 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 UNCXA6NJT0 531 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 RNF113AO15541 343 aaKnown RBP11.41□□□□□ -0.58
CIT-216ENST00000544872 NPM3O75607 178 aaKnown RBP11.41□□□□□ -0.58
CIT-216ENST00000544872 TCP10Q12799 353 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 PICALMQ13492 652 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 CASC1Q6TDU7 716 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 BRI3BPQ8WY22 251 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 OPTNQ96CV9 577 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 IDI2Q9BXS1 227 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 NACAP1Q9BZK3 213 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 NBPF3Q9H094 633 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 OSBPL3Q9H4L5 887 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 NDUFB9Q9Y6M9 179 aa11.41□□□□□ -0.58
CIT-216ENST00000544872 COL1A1P02452 1464 aaPredicted RBP11.4□□□□□ -0.58
CIT-216ENST00000544872 APPP05067 770 aa11.4□□□□□ -0.58
CIT-216ENST00000544872 ADD2P35612 726 aa11.4□□□□□ -0.58
CIT-216ENST00000544872 MAP3K11Q16584 847 aa11.4□□□□□ -0.58
CIT-216ENST00000544872 TSHZ3Q63HK5 1081 aa11.4□□□□□ -0.58
CIT-216ENST00000544872 TTC6Q86TZ1 520 aa11.4□□□□□ -0.58
CIT-216ENST00000544872 FAM43AQ8N2R8 423 aa11.4□□□□□ -0.58
CIT-216ENST00000544872 CRACR2BQ8N4Y2 399 aaPredicted RBP11.4□□□□□ -0.58
CIT-216ENST00000544872 MIGA1Q8NAN2 632 aa11.4□□□□□ -0.58
CIT-216ENST00000544872 ELP3Q9H9T3 547 aa11.4□□□□□ -0.58
CIT-216ENST00000544872 DIAPH3Q9NSV4 1193 aa11.4□□□□□ -0.58
CIT-216ENST00000544872 CSADQ9Y600 493 aa11.4□□□□□ -0.58
CIT-216ENST00000544872 POLR3DP05423 398 aaPredicted RBP11.39□□□□□ -0.59
CIT-216ENST00000544872 RGS3P49796 1198 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 CACNB3P54284 484 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 PLEKHM2Q8IWE5 1019 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 PI4K2BQ8TCG2 481 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 SH3RF3Q8TEJ3 882 aaPredicted RBP11.39□□□□□ -0.59
CIT-216ENST00000544872 TGFBRAP1Q8WUH2 860 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 RUFY2Q8WXA3 655 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 APPBP2Q92624 585 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 ZNF341Q9BYN7 854 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 TMEM39BQ9GZU3 492 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 C11orf49Q9H6J7 331 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 ATP8A2Q9NTI2 1148 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 PI4KBQ9UBF8 816 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 SPEF2Q9C093 1822 aa11.39□□□□□ -0.59
CIT-216ENST00000544872 COL2A1P02458 1487 aaPredicted RBP11.38□□□□□ -0.59
CIT-216ENST00000544872 ZDBF2Q9HCK1 2354 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 FAM86C2PA6NEL3 165 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 ADCY3O60266 1144 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 INHAP05111 366 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 SLC3A2P08195 630 aaKnown RBP11.38□□□□□ -0.59
CIT-216ENST00000544872 GTF2A2P52657 109 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 PRKCZQ05513 592 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 FOXP4Q8IVH2 680 aaPredicted RBP11.38□□□□□ -0.59
CIT-216ENST00000544872 ANKRD13AQ8IZ07 590 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 OTUD7AQ8TE49 926 aaPredicted RBP11.38□□□□□ -0.59
CIT-216ENST00000544872 EDC3Q96F86 508 aaKnown RBP11.38□□□□□ -0.59
CIT-216ENST00000544872 MS4A4AQ96JQ5 239 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 ZNF287Q9HBT7 754 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 PCDHAC2Q9Y5I4 1007 aa11.38□□□□□ -0.59
CIT-216ENST00000544872 MBD4O95243 580 aa11.37□□□□□ -0.59
CIT-216ENST00000544872 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
CIT-216ENST00000544872 NBPF12Q5TAG4 269 aaPredicted RBP11.37□□□□□ -0.59
CIT-216ENST00000544872 MAPKAPK5Q8IW41 473 aa11.37□□□□□ -0.59
CIT-216ENST00000544872 ANKLE1Q8NAG6 615 aa11.37□□□□□ -0.59
CIT-216ENST00000544872 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
CIT-216ENST00000544872 OSBPL5Q9H0X9 879 aaPredicted RBP11.37□□□□□ -0.59
CIT-216ENST00000544872 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.37□□□□□ -0.59
CIT-216ENST00000544872 PICK1Q9NRD5 415 aa11.37□□□□□ -0.59
CIT-216ENST00000544872 HELLSQ9NRZ9 838 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms