RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-231ENST00000544639 CAP2P40123 477 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 ARID5AQ03989 594 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 MAP7Q14244 749 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 NKG7Q16617 165 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 MCTP1Q6DN14 999 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 SEZ6L2Q6UXD5 910 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 VPS37DQ86XT2 251 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 CLEC10AQ8IUN9 316 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 HID1Q8IV36 788 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.78□□□□□ -1.32
RAP1B-231ENST00000544639 MRPL41Q8IXM3 137 aaKnown RBP6.78□□□□□ -1.32
RAP1B-231ENST00000544639 ACSF2Q96CM8 615 aaPredicted RBP6.78□□□□□ -1.32
RAP1B-231ENST00000544639 TJP2Q9UDY2 1190 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 PPT2Q9UMR5 302 aa6.78□□□□□ -1.32
RAP1B-231ENST00000544639 DYNC1LI2O43237 492 aaPredicted RBP6.77□□□□□ -1.33
RAP1B-231ENST00000544639 FGRP09769 529 aa6.77□□□□□ -1.33
RAP1B-231ENST00000544639 DNAJA1P31689 397 aaKnown RBP6.77□□□□□ -1.33
RAP1B-231ENST00000544639 NFIAQ12857 509 aa6.77□□□□□ -1.33
RAP1B-231ENST00000544639 SLBPQ14493 270 aaKnown RBP eCLIP6.77□□□□□ -1.33
RAP1B-231ENST00000544639 PAOXQ6QHF9 649 aa6.77□□□□□ -1.33
RAP1B-231ENST00000544639 CDC37L1Q7L3B6 337 aa6.77□□□□□ -1.33
RAP1B-231ENST00000544639 FAM83CQ9BQN1 747 aa6.77□□□□□ -1.33
RAP1B-231ENST00000544639 C7orf69Q9H7B7 122 aa6.77□□□□□ -1.33
RAP1B-231ENST00000544639 SSU72Q9NP77 194 aaKnown RBP6.77□□□□□ -1.33
RAP1B-231ENST00000544639 COL17A1Q9UMD9 1497 aaPredicted RBP6.77□□□□□ -1.33
RAP1B-231ENST00000544639 DNAJA2O60884 412 aa6.76□□□□□ -1.33
RAP1B-231ENST00000544639 RNF43Q68DV7 783 aa6.76□□□□□ -1.33
RAP1B-231ENST00000544639 INTS5Q6P9B9 1019 aaKnown RBP6.76□□□□□ -1.33
RAP1B-231ENST00000544639 MCF2L2Q86YR7 1114 aa6.76□□□□□ -1.33
RAP1B-231ENST00000544639 ZDHHC13Q8IUH4 622 aa6.76□□□□□ -1.33
RAP1B-231ENST00000544639 MCATQ8IVS2 390 aaKnown RBP6.76□□□□□ -1.33
RAP1B-231ENST00000544639 TMEM87BQ96K49 555 aa6.76□□□□□ -1.33
RAP1B-231ENST00000544639 FERD3LQ96RJ6 166 aa6.76□□□□□ -1.33
RAP1B-231ENST00000544639 STRIP2Q9ULQ0 834 aa6.76□□□□□ -1.33
RAP1B-231ENST00000544639 HMX2A2RU54 273 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 MEIS3P2A8K0S8 358 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 CST3P01034 146 aaPredicted RBP6.75□□□□□ -1.33
RAP1B-231ENST00000544639 TGFB1P01137 390 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 IMPDH2P12268 514 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 MLECQ14165 292 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 NFKBIBQ15653 356 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 SLC6A19Q695T7 634 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 CCDC81Q6ZN84 652 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 ARMCX6Q7L4S7 300 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 DBNDD2Q9BQY9 259 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 LGR6Q9HBX8 967 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 C1GALT1Q9NS00 363 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 GMIPQ9P107 970 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 PRKAG2Q9UGJ0 569 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 KLHL3Q9UH77 587 aa6.75□□□□□ -1.33
RAP1B-231ENST00000544639 LRIG2O94898 1065 aa6.74□□□□□ -1.33
RAP1B-231ENST00000544639 MED26O95402 600 aa6.74□□□□□ -1.33
RAP1B-231ENST00000544639 GRIK1P39086 918 aa6.74□□□□□ -1.33
RAP1B-231ENST00000544639 LRRFIP1Q32MZ4 808 aaKnown RBP6.74□□□□□ -1.33
RAP1B-231ENST00000544639 PRAMEF13Q5VWM6 474 aa6.74□□□□□ -1.33
RAP1B-231ENST00000544639 OVOS1Q6IE37 1185 aa6.74□□□□□ -1.33
RAP1B-231ENST00000544639 RBBP8NLQ8NC74 664 aaPredicted RBP6.74□□□□□ -1.33
RAP1B-231ENST00000544639 FAM13CQ8NE31 585 aa6.74□□□□□ -1.33
RAP1B-231ENST00000544639 TMEM40Q8WWA1 233 aa6.74□□□□□ -1.33
RAP1B-231ENST00000544639 GATA6Q92908 595 aa6.74□□□□□ -1.33
RAP1B-231ENST00000544639 DPH2Q9BQC3 489 aaPredicted RBP6.74□□□□□ -1.33
RAP1B-231ENST00000544639 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.74□□□□□ -1.33
RAP1B-231ENST00000544639 SRRTQ9BXP5 876 aaKnown RBP6.74□□□□□ -1.33
RAP1B-231ENST00000544639 FOXQ1Q9C009 403 aa6.74□□□□□ -1.33
RAP1B-231ENST00000544639 ANTXR1Q9H6X2 564 aa6.74□□□□□ -1.33
RAP1B-231ENST00000544639 SLC22A31A6NKX4 558 aa6.73□□□□□ -1.33
RAP1B-231ENST00000544639 UPK3BL1B0FP48 263 aa6.73□□□□□ -1.33
RAP1B-231ENST00000544639 CHURC1-FNTBB4DL54 471 aa6.73□□□□□ -1.33
RAP1B-231ENST00000544639 UPK3BL2E5RIL1 263 aa6.73□□□□□ -1.33
RAP1B-231ENST00000544639 GIPRP48546 466 aa6.73□□□□□ -1.33
RAP1B-231ENST00000544639 YARSP54577 528 aaKnown RBP6.73□□□□□ -1.33
RAP1B-231ENST00000544639 CDK5R2Q13319 367 aa6.73□□□□□ -1.33
RAP1B-231ENST00000544639 FBXW10Q5XX13 1052 aa6.73□□□□□ -1.33
RAP1B-231ENST00000544639 SLFN12Q8IYM2 578 aa6.73□□□□□ -1.33
RAP1B-231ENST00000544639 SREK1Q8WXA9 508 aaKnown RBP6.73□□□□□ -1.33
RAP1B-231ENST00000544639 SHDQ96IW2 340 aa6.73□□□□□ -1.33
RAP1B-231ENST00000544639 TANGO6Q9C0B7 1094 aa6.73□□□□□ -1.33
RAP1B-231ENST00000544639 PAX4O43316 350 aa6.72□□□□□ -1.33
RAP1B-231ENST00000544639 SPINK2P20155 84 aa6.72□□□□□ -1.33
RAP1B-231ENST00000544639 ADMP35318 185 aa6.72□□□□□ -1.33
RAP1B-231ENST00000544639 EIF6P56537 245 aaKnown RBP6.72□□□□□ -1.33
RAP1B-231ENST00000544639 SF3A1Q15459 793 aaKnown RBP6.72□□□□□ -1.33
RAP1B-231ENST00000544639 CDCP2Q5VXM1 449 aa6.72□□□□□ -1.33
RAP1B-231ENST00000544639 ZAR1Q86SH2 424 aa6.72□□□□□ -1.33
RAP1B-231ENST00000544639 LSRQ86X29 649 aaPredicted RBP6.72□□□□□ -1.33
RAP1B-231ENST00000544639 MFSD2AQ8NA29 543 aa6.72□□□□□ -1.33
RAP1B-231ENST00000544639 CPLX3Q8WVH0 158 aa6.72□□□□□ -1.33
RAP1B-231ENST00000544639 ATG4CQ96DT6 458 aa6.72□□□□□ -1.33
RAP1B-231ENST00000544639 CNNM2Q9H8M5 875 aa6.72□□□□□ -1.33
RAP1B-231ENST00000544639 GOLGA2P5Q9HBQ8 144 aa6.72□□□□□ -1.33
RAP1B-231ENST00000544639 PRR19A6NJB7 356 aa6.71□□□□□ -1.34
RAP1B-231ENST00000544639 SSBP05455 408 aaKnown RBP eCLIP6.71□□□□□ -1.34
RAP1B-231ENST00000544639 IRAK1P51617 712 aa6.71□□□□□ -1.34
RAP1B-231ENST00000544639 GP2P55259 537 aaKnown RBP6.71□□□□□ -1.34
RAP1B-231ENST00000544639 ARSHQ5FYA8 562 aa6.71□□□□□ -1.34
RAP1B-231ENST00000544639 NLRC3Q7RTR2 1065 aa6.71□□□□□ -1.34
RAP1B-231ENST00000544639 DTX1Q86Y01 620 aa6.71□□□□□ -1.34
RAP1B-231ENST00000544639 OR6P1Q8NGX9 317 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms