RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 MYH2Q9UKX2 1941 aa18.14■□□□□ 0.49
SNRNP70-203ENST00000544278 IFNAR1P17181 557 aa18.14■□□□□ 0.49
SNRNP70-203ENST00000544278 STAG1Q8WVM7 1258 aa18.14■□□□□ 0.49
SNRNP70-203ENST00000544278 TERF1P54274 439 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 ARMCX5Q6P1M9 558 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 GPKOWQ92917 476 aaPredicted RBP eCLIP18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 PLIN2Q99541 437 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 NAT10Q9H0A0 1025 aaKnown RBP18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 CSRNP2Q9H175 543 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 ZPR1O75312 459 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 LIFRP42702 1097 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 NLRP12P59046 1061 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 CCZ1BP86790 482 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 CCZ1P86791 482 aaPredicted RBP18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 FANCCQ00597 558 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 CTR9Q6PD62 1173 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 ESR2Q92731 530 aa18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 GNL3LQ9NVN8 582 aaKnown RBP18.13■□□□□ 0.49
SNRNP70-203ENST00000544278 MTERF4Q7Z6M4 381 aaKnown RBP18.12■□□□□ 0.49
SNRNP70-203ENST00000544278 NLRP3Q96P20 1036 aa18.12■□□□□ 0.49
SNRNP70-203ENST00000544278 CNNM2Q9H8M5 875 aa18.12■□□□□ 0.49
SNRNP70-203ENST00000544278 CCNL1Q9UK58 526 aaPredicted RBP18.12■□□□□ 0.49
SNRNP70-203ENST00000544278 A0A087X0B3 334 aa18.12■□□□□ 0.49
SNRNP70-203ENST00000544278 FMR1Q06787 632 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNRNP70-203ENST00000544278 EEF2KMTQ96G04 330 aa18.12■□□□□ 0.49
SNRNP70-203ENST00000544278 MAPK8IP1Q9UQF2 711 aa18.12■□□□□ 0.49
SNRNP70-203ENST00000544278 PLEKHG2Q9H7P9 1386 aa18.12■□□□□ 0.49
SNRNP70-203ENST00000544278 GOLGA8HP0CJ92 632 aa18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 U2AF2P26368 475 aaKnown RBP eCLIP18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 ALX1Q15699 326 aa18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 ATL3Q6DD88 541 aa18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 KRI1Q8N9T8 703 aaKnown RBP18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 ZSCAN10Q96SZ4 725 aaPredicted RBP18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 HSD3B7Q9H2F3 369 aa18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 SLURP2P0DP57 97 aa18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 ARHGEF1Q92888 912 aaKnown RBP18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 BLZF1Q9H2G9 400 aa18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 HIBADHP31937 336 aaKnown RBP18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 KRBA2Q6ZNG9 492 aa18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 UIMC1Q96RL1 719 aa18.11■□□□□ 0.49
SNRNP70-203ENST00000544278 COL16A1Q07092 1604 aaPredicted RBP18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 USP17L3A6NCW0 530 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 USP17L4A6NCW7 530 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 UBASH3AP57075 661 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 USP17L1Q7RTZ2 530 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 NSUN4Q96CB9 384 aaKnown RBP18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 MRFAP1L1Q96HT8 127 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 VWA3AA6NCI4 1184 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 TSPY2A6NKD2 308 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 SEC23AQ15436 765 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 RESP18Q5W5W9 173 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 LRRN4CLQ8ND94 238 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 CPLX3Q8WVH0 158 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 BSDC1Q9NW68 430 aaPredicted RBP18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 ATRNO75882 1429 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 NHSL1Q5SYE7 1610 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 UBAP1LF5GYI3 381 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 PKN1Q16512 942 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 CEP135Q66GS9 1140 aa18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 SAMSN1Q9NSI8 373 aaKnown RBP18.1■□□□□ 0.49
SNRNP70-203ENST00000544278 PIK3AP1Q6ZUJ8 805 aa18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 DZIP1Q86YF9 867 aaKnown RBP18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 STAG2Q8N3U4 1231 aa18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 SRBD1Q8N5C6 995 aaKnown RBP18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 JMYQ8N9B5 988 aa18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 DEXIO95424 95 aa18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 MCM7P33993 719 aa18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 ZNF771Q7L3S4 317 aaPredicted RBP18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 DCP1AQ9NPI6 582 aaPredicted RBP18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 FBXO2Q9UK22 296 aaPredicted RBP18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 HPSEQ9Y251 543 aa18.09■□□□□ 0.49
SNRNP70-203ENST00000544278 TPM3P06753 285 aa18.08■□□□□ 0.49
SNRNP70-203ENST00000544278 PTPN14Q15678 1187 aa18.08■□□□□ 0.49
SNRNP70-203ENST00000544278 SARM1Q6SZW1 724 aa18.08■□□□□ 0.49
SNRNP70-203ENST00000544278 PAXIP1Q6ZW49 1069 aaPredicted RBP18.08■□□□□ 0.49
SNRNP70-203ENST00000544278 CATIPQ7Z7H3 387 aa18.08■□□□□ 0.49
SNRNP70-203ENST00000544278 MAPKAPK5Q8IW41 473 aa18.08■□□□□ 0.49
SNRNP70-203ENST00000544278 DHX37Q8IY37 1157 aaKnown RBP18.08■□□□□ 0.49
SNRNP70-203ENST00000544278 PRIMPOLQ96LW4 560 aa18.08■□□□□ 0.49
SNRNP70-203ENST00000544278 F8W031 263 aaPredicted RBP18.08■□□□□ 0.48
SNRNP70-203ENST00000544278 ADKP55263 362 aaKnown RBP18.08■□□□□ 0.48
SNRNP70-203ENST00000544278 OLFM4Q6UX06 510 aa18.08■□□□□ 0.48
SNRNP70-203ENST00000544278 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.08■□□□□ 0.48
SNRNP70-203ENST00000544278 MYH15Q9Y2K3 1946 aa18.08■□□□□ 0.48
SNRNP70-203ENST00000544278 PNPLA7Q6ZV29 1317 aa18.08■□□□□ 0.48
SNRNP70-203ENST00000544278 RNF41Q9H4P4 317 aaPredicted RBP18.08■□□□□ 0.48
SNRNP70-203ENST00000544278 STX8Q9UNK0 236 aa18.08■□□□□ 0.48
SNRNP70-203ENST00000544278 GNAT2P19087 354 aa18.07■□□□□ 0.48
SNRNP70-203ENST00000544278 SFPQP23246 707 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNRNP70-203ENST00000544278 UBE4AQ14139 1066 aa18.07■□□□□ 0.48
SNRNP70-203ENST00000544278 SYT10Q6XYQ8 523 aa18.07■□□□□ 0.48
SNRNP70-203ENST00000544278 FAM196AQ6ZSG2 479 aa18.07■□□□□ 0.48
SNRNP70-203ENST00000544278 IQCA1Q86XH1 822 aa18.07■□□□□ 0.48
SNRNP70-203ENST00000544278 VAT1LQ9HCJ6 419 aa18.07■□□□□ 0.48
SNRNP70-203ENST00000544278 MAN1B1Q9UKM7 699 aa18.07■□□□□ 0.48
SNRNP70-203ENST00000544278 MYH13Q9UKX3 1938 aa18.07■□□□□ 0.48
SNRNP70-203ENST00000544278 CCDC112Q8NEF3 446 aa18.07■□□□□ 0.48
SNRNP70-203ENST00000544278 TGFBRAP1Q8WUH2 860 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms