RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-222ENST00000543695 MAP1SQ66K74 1059 aaPredicted RBP13.06□□□□□ -0.32
LDHA-222ENST00000543695 SASS6Q6UVJ0 657 aa13.06□□□□□ -0.32
LDHA-222ENST00000543695 NFXL1Q6ZNB6 911 aa13.06□□□□□ -0.32
LDHA-222ENST00000543695 USP50Q70EL3 339 aaPredicted RBP13.06□□□□□ -0.32
LDHA-222ENST00000543695 TMTC2Q8N394 836 aa13.06□□□□□ -0.32
LDHA-222ENST00000543695 ENGASEQ8NFI3 743 aa13.06□□□□□ -0.32
LDHA-222ENST00000543695 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
LDHA-222ENST00000543695 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
LDHA-222ENST00000543695 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
LDHA-222ENST00000543695 PRKAB2O43741 272 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 TPM3P06753 285 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 GYG1P46976 350 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
LDHA-222ENST00000543695 PPARAQ07869 468 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 STK38Q15208 465 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 NTRK3Q16288 839 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 ADALQ6DHV7 355 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 CIAPIN1Q6FI81 312 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 SYNE3Q6ZMZ3 975 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 LINC00301Q8NCQ3 95 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
LDHA-222ENST00000543695 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 WASF1Q92558 559 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 FAM84BQ96KN1 310 aaPredicted RBP13.05□□□□□ -0.32
LDHA-222ENST00000543695 GOLPH3LQ9H4A5 285 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 RAI14Q9P0K7 980 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 ZSWIM5Q9P217 1185 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
LDHA-222ENST00000543695 TACC3Q9Y6A5 838 aa13.05□□□□□ -0.32
LDHA-222ENST00000543695 SCN4AP35499 1836 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 ERICH2A1L162 156 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 C6orf229H3BNL8 230 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
LDHA-222ENST00000543695 PCP11498 1178 aaKnown RBP13.04□□□□□ -0.32
LDHA-222ENST00000543695 IFNAR1P17181 557 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 CDC27P30260 824 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 WTAPQ15007 396 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 ANO6Q4KMQ2 910 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.04□□□□□ -0.32
LDHA-222ENST00000543695 RAB11FIP4Q86YS3 637 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 CKAP2LQ8IYA6 745 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 FSIP1Q8NA03 581 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 MRPS27Q92552 414 aaKnown RBP13.04□□□□□ -0.32
LDHA-222ENST00000543695 RIOK1Q9BRS2 568 aaKnown RBP13.04□□□□□ -0.32
LDHA-222ENST00000543695 FTOQ9C0B1 505 aaKnown RBP eCLIP13.04□□□□□ -0.326e-6■■■□□ 17.7
LDHA-222ENST00000543695 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
LDHA-222ENST00000543695 GPRC5DQ9NZD1 345 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 PCDHA7Q9UN72 937 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 SLC12A7Q9Y666 1083 aa13.04□□□□□ -0.32
LDHA-222ENST00000543695 LRRC37AA6NMS7 1700 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 KIF28PB7ZC32 967 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 SPTLC2O15270 562 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 OFD1O75665 1012 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 RAD17O75943 681 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 FMNL1O95466 1100 aaPredicted RBP13.03□□□□□ -0.32
LDHA-222ENST00000543695 ME1P48163 572 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 SSRP1Q08945 709 aaKnown RBP13.03□□□□□ -0.32
LDHA-222ENST00000543695 SNW1Q13573 536 aaKnown RBP13.03□□□□□ -0.32
LDHA-222ENST00000543695 TRIM29Q14134 588 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 PPP2R5BQ15173 497 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 STX1AQ16623 288 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 ANO1Q5XXA6 986 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 KRT40Q6A162 431 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 OTUD7BQ6GQQ9 843 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 MICU3Q86XE3 530 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 VPS37DQ86XT2 251 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 MIGA1Q8NAN2 632 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 EYA3Q99504 573 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 CBX8Q9HC52 389 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 SENP2Q9HC62 589 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 ADARB2Q9NS39 739 aaKnown RBP13.03□□□□□ -0.32
LDHA-222ENST00000543695 ABCF2Q9UG63 623 aa13.03□□□□□ -0.32
LDHA-222ENST00000543695 CCDC196A0A1B0GTZ2 297 aa13.02□□□□□ -0.33
LDHA-222ENST00000543695 GOLGA6L6A8MZA4 724 aa13.02□□□□□ -0.33
LDHA-222ENST00000543695 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.33
LDHA-222ENST00000543695 GMPSP49915 693 aaPredicted RBP13.02□□□□□ -0.33
LDHA-222ENST00000543695 SF3A1Q15459 793 aaKnown RBP13.02□□□□□ -0.33
LDHA-222ENST00000543695 RTN1Q16799 776 aa13.02□□□□□ -0.33
LDHA-222ENST00000543695 ADGRA1Q86SQ6 560 aa13.02□□□□□ -0.33
LDHA-222ENST00000543695 FMR1NBQ8N0W7 255 aaPredicted RBP13.02□□□□□ -0.33
LDHA-222ENST00000543695 ESR2Q92731 530 aa13.02□□□□□ -0.33
LDHA-222ENST00000543695 IQSEC3Q9UPP2 1182 aaPredicted RBP13.02□□□□□ -0.33
LDHA-222ENST00000543695 CLIC4Q9Y696 253 aa13.02□□□□□ -0.33
LDHA-222ENST00000543695 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.02□□□□□ -0.339e-16■□□□□ 10.6
LDHA-222ENST00000543695 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.33
LDHA-222ENST00000543695 COL4A5P29400 1685 aa13.02□□□□□ -0.33
LDHA-222ENST00000543695 PCNTO95613 3336 aa13.01□□□□□ -0.33
LDHA-222ENST00000543695 H7C1D1 291 aa13.01□□□□□ -0.33
LDHA-222ENST00000543695 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
LDHA-222ENST00000543695 AP5Z1O43299 807 aa13.01□□□□□ -0.33
LDHA-222ENST00000543695 PPFIA3O75145 1194 aa13.01□□□□□ -0.33
LDHA-222ENST00000543695 PPP6R2O75170 966 aa13.01□□□□□ -0.33
LDHA-222ENST00000543695 FGRP09769 529 aa13.01□□□□□ -0.33
LDHA-222ENST00000543695 HSPA1AP0DMV8 641 aaKnown RBP13.01□□□□□ -0.33
LDHA-222ENST00000543695 HSPA1BP0DMV9 641 aaKnown RBP13.01□□□□□ -0.33
LDHA-222ENST00000543695 U2AF2P26368 475 aaKnown RBP eCLIP13.01□□□□□ -0.332e-8■■□□□ 13.2
LDHA-222ENST00000543695 HIBADHP31937 336 aaKnown RBP13.01□□□□□ -0.33
LDHA-222ENST00000543695 NT5C2P49902 561 aa13.01□□□□□ -0.33
LDHA-222ENST00000543695 GPSM2P81274 684 aa13.01□□□□□ -0.33
LDHA-222ENST00000543695 SLC39A14Q15043 492 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 227.7 ms