RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 USP26Q9BXU7 913 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 GBP3Q9H0R5 595 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 TSPYL1Q9H0U9 437 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 PIM2Q9P1W9 311 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 RAD17O75943 681 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 ALAS1P13196 640 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 STRN3Q13033 797 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 NLRX1Q86UT6 975 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 KIF18AQ8NI77 898 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 GLG1Q92896 1179 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 INTS4Q96HW7 963 aaKnown RBP7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 MYL10Q9BUA6 226 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 DSCC1Q9BVC3 393 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 SETSIPP0DME0 302 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 CNGA1P29973 690 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 FAM47CQ5HY64 1035 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 REXO1Q8N1G1 1221 aaKnown RBP7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 SNX21Q969T3 373 aa7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 EAF2Q96CJ1 260 aaPredicted RBP7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 NAA15Q9BXJ9 866 aaKnown RBP7.75□□□□□ -1.17
SRGAP1-206ENST00000543397 CARNS1A5YM72 827 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 PABPN1LA6NDY0 278 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 FLOT1O75955 427 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 S100BP04271 92 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 KLHL40Q2TBA0 621 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 NCAPH2Q6IBW4 605 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 MTERF4Q7Z6M4 381 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CCDC117Q8IWD4 279 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 ANKRD35Q8N283 1001 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 BANK1Q8NDB2 785 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 SDR42E1Q8WUS8 393 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 EDC3Q96F86 508 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CSRNP1Q96S65 589 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CRACR2AQ9BSW2 395 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 COPRSQ9NQ92 184 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CASQ1P31415 396 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CYLC1P35663 651 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 ATL3Q6DD88 541 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CLEC4GQ6UXB4 293 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 NLRP10Q86W26 655 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 GOLGA6L9A6NEM1 432 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 RIOK3O14730 519 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 PHKA1P46020 1223 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CCNA1P78396 465 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 RNF187Q5TA31 235 aaPredicted RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CIAPIN1Q6FI81 312 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 EHBP1Q8NDI1 1231 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 MASTLQ96GX5 879 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 LLPHQ9BRT6 129 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 NCOA5Q9HCD5 579 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 SHROOM2Q13796 1616 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 ZBTB7AO95365 584 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 LMAN1P49257 510 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 SLC8A3P57103 927 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 ABCB5Q2M3G0 1257 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 ARMC9Q7Z3E5 817 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 SREK1Q8WXA9 508 aaKnown RBP7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 SEC31BQ9NQW1 1179 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 ABCC4O15439 1325 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CDAN1Q8IWY9 1227 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 IFNL3Q8IZI9 196 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CCDC17Q96LX7 622 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 CCDC113Q9H0I3 377 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 MLXIPQ9HAP2 919 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 LRWD1Q9UFC0 647 aa7.74□□□□□ -1.17
SRGAP1-206ENST00000543397 ZMYM4Q5VZL5 1548 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 TNS3Q68CZ2 1445 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 TTC38Q5R3I4 469 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 NCAPG2Q86XI2 1143 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 TTC12Q9H892 705 aaPredicted RBP7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 ABT1Q9ULW3 272 aaKnown RBP7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 EXOC7Q9UPT5 735 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 CLASP1Q7Z460 1538 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 TESPA1A2RU30 521 aaPredicted RBP7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 CCDC175P0C221 793 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 PPP1R2P41236 205 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 ARID5AQ03989 594 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 ZNF280DQ6N043 979 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 SNX29Q8TEQ0 813 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 MRPL11Q9Y3B7 192 aaKnown RBP7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 TTC36A6NLP5 189 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 CYP27B1O15528 508 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 CIAO1O76071 339 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 IFFO1Q0D2I5 559 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 HLTFQ14527 1009 aaKnown RBP eCLIP7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 MAP9Q49MG5 647 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 DCAF17Q5H9S7 520 aaPredicted RBP7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 CEP135Q66GS9 1140 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 HACE1Q8IYU2 909 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 CCDC102AQ96A19 550 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 PUS3Q9BZE2 481 aaKnown RBP7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 TRMT1Q9NXH9 659 aaKnown RBP7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 SYNMO15061 1565 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 ATP10DQ9P241 1426 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 TRAF5O00463 557 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 LPXNO60711 386 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 STX17P56962 302 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 GRAPQ13588 217 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 KCTD2Q14681 263 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 WDR44Q5JSH3 913 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms