RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 NUP133Q8WUM0 1156 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 ZDHHC15Q96MV8 337 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 MRIQ9BWK5 157 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 FAM217BQ9NTX9 383 aaPredicted RBP12.87□□□□□ -0.35
SCG3-202ENST00000542355 CD2APQ9Y5K6 639 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 ATP6V1DQ9Y5K8 247 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 BAZ2AQ9UIF9 1905 aaKnown RBP12.87□□□□□ -0.35
SCG3-202ENST00000542355 MYH2Q9UKX2 1941 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 PTMSP20962 102 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
SCG3-202ENST00000542355 DDX4Q9NQI0 724 aaKnown RBP12.87□□□□□ -0.35
SCG3-202ENST00000542355 LMBRD1Q9NUN5 540 aa12.87□□□□□ -0.35
SCG3-202ENST00000542355 ORC3Q9UBD5 711 aaPredicted RBP12.87□□□□□ -0.35
SCG3-202ENST00000542355 HDLBPQ00341 1268 aaKnown RBP12.86□□□□□ -0.35
SCG3-202ENST00000542355 CPLX2Q6PUV4 134 aaKnown RBP12.86□□□□□ -0.35
SCG3-202ENST00000542355 ZNF654Q8IZM8 581 aa12.86□□□□□ -0.35
SCG3-202ENST00000542355 GDPD2Q9HCC8 539 aa12.86□□□□□ -0.35
SCG3-202ENST00000542355 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
SCG3-202ENST00000542355 PHKBQ93100 1093 aa12.86□□□□□ -0.35
SCG3-202ENST00000542355 VPS33BQ9H267 617 aa12.86□□□□□ -0.35
SCG3-202ENST00000542355 SERPINA10Q9UK55 444 aa12.86□□□□□ -0.35
SCG3-202ENST00000542355 KIAA1551Q9HCM1 1747 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 ROBO3Q96MS0 1386 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 PSMD14O00487 310 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 CDKL5O76039 1030 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
SCG3-202ENST00000542355 CDK8P49336 464 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 GUCY1B3Q02153 619 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 NFIAQ12857 509 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 NTRK3Q16288 839 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 RTN1Q16799 776 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 CATIPQ7Z7H3 387 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 NIM1KQ8IY84 436 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 FANCBQ8NB91 859 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 ZNF287Q9HBT7 754 aa12.85□□□□□ -0.35
SCG3-202ENST00000542355 TSPY3P0CV98 308 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 TSPY8P0CW00 308 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 NCLP19338 710 aaKnown RBP12.84□□□□□ -0.35
SCG3-202ENST00000542355 CACNB3P54284 484 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 DNM1Q05193 864 aaKnown RBP12.84□□□□□ -0.35
SCG3-202ENST00000542355 SKOR2Q2VWA4 1001 aaPredicted RBP12.84□□□□□ -0.35
SCG3-202ENST00000542355 FAM173BQ6P4H8 233 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 RSBN1LQ6PCB5 846 aaPredicted RBP12.84□□□□□ -0.35
SCG3-202ENST00000542355 C16orf86Q6ZW13 317 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 TTC6Q86TZ1 520 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 TAOK3Q9H2K8 898 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 IL17RBQ9NRM6 502 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 ZNRF3Q9ULT6 936 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 CNPY2Q9Y2B0 182 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
SCG3-202ENST00000542355 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 VIL1P09327 827 aaKnown RBP12.84□□□□□ -0.35
SCG3-202ENST00000542355 RASA1P20936 1047 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 TMCO4Q5TGY1 634 aa12.84□□□□□ -0.35
SCG3-202ENST00000542355 CMTR1Q8N1G2 835 aaKnown RBP12.84□□□□□ -0.35
SCG3-202ENST00000542355 OSBPL5Q9H0X9 879 aaPredicted RBP12.84□□□□□ -0.35
SCG3-202ENST00000542355 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
SCG3-202ENST00000542355 DDX49Q9Y6V7 483 aaKnown RBP12.84□□□□□ -0.35
SCG3-202ENST00000542355 CCDC196A0A1B0GTZ2 297 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 NT5C2P49902 561 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 TCP10Q12799 353 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 CFAP100Q494V2 611 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 OTUD7BQ6GQQ9 843 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 USP48Q86UV5 1035 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 ZFPM1Q8IX07 1006 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 C8orf76Q96K31 380 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 WDR70Q9NW82 654 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 RCAN1P53805 252 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
SCG3-202ENST00000542355 TROAPQ12815 778 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 RCSD1Q6JBY9 416 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 NLGN2Q8NFZ4 835 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 PRMT6Q96LA8 375 aaPredicted RBP12.83□□□□□ -0.36
SCG3-202ENST00000542355 SLC26A6Q9BXS9 759 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 TDRD3Q9H7E2 651 aaKnown RBP12.83□□□□□ -0.36
SCG3-202ENST00000542355 GJB4Q9NTQ9 266 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 SCN9AQ15858 1988 aa12.83□□□□□ -0.36
SCG3-202ENST00000542355 MYO3BQ8WXR4 1341 aa12.82□□□□□ -0.36
SCG3-202ENST00000542355 NFKBIEO00221 500 aa12.82□□□□□ -0.36
SCG3-202ENST00000542355 IFNAR1P17181 557 aa12.82□□□□□ -0.36
SCG3-202ENST00000542355 RESTQ13127 1097 aa12.82□□□□□ -0.36
SCG3-202ENST00000542355 DGKHQ86XP1 1220 aa12.82□□□□□ -0.36
SCG3-202ENST00000542355 OGFOD1Q8N543 542 aa12.82□□□□□ -0.36
SCG3-202ENST00000542355 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
SCG3-202ENST00000542355 AIFM3Q96NN9 605 aa12.82□□□□□ -0.36
SCG3-202ENST00000542355 ZSCAN16Q9H4T2 348 aaPredicted RBP12.82□□□□□ -0.36
SCG3-202ENST00000542355 COL4A5P29400 1685 aa12.82□□□□□ -0.36
SCG3-202ENST00000542355 UBE2Q2LH0YL09 131 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 FIBPO43427 364 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 CALM1P0DP23 149 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 CALM2P0DP24 149 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 CALM3P0DP25 149 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 GABPAQ06546 454 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 CXCL9Q07325 125 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 PPP2R5BQ15173 497 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 FBXO18Q8NFZ0 1043 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 GMLQ99445 158 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 ALG1Q9BT22 464 aa12.81□□□□□ -0.36
SCG3-202ENST00000542355 TCP11L1Q9NUJ3 509 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms