RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 MMP10P09238 476 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 CDC27P30260 824 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 METAP2P50579 478 aaKnown RBP eCLIP19.81■□□□□ 0.76
SPIDR-227ENST00000541342 SPTY2D1Q68D10 685 aaPredicted RBP19.81■□□□□ 0.76
SPIDR-227ENST00000541342 ZNF592Q92610 1267 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 PPEF1O14829 653 aaPredicted RBP19.81■□□□□ 0.76
SPIDR-227ENST00000541342 SRGNP10124 158 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 MSL1Q68DK7 614 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 MRPS27Q92552 414 aaKnown RBP19.81■□□□□ 0.76
SPIDR-227ENST00000541342 RNF41Q9H4P4 317 aaPredicted RBP19.81■□□□□ 0.76
SPIDR-227ENST00000541342 CLIC4Q9Y696 253 aa19.81■□□□□ 0.76
SPIDR-227ENST00000541342 LDHBP07195 334 aaKnown RBP19.8■□□□□ 0.76
SPIDR-227ENST00000541342 DPCR1Q3MIW9 517 aa19.8■□□□□ 0.76
SPIDR-227ENST00000541342 MICU3Q86XE3 530 aa19.8■□□□□ 0.76
SPIDR-227ENST00000541342 LINC00301Q8NCQ3 95 aa19.8■□□□□ 0.76
SPIDR-227ENST00000541342 FLAD1Q8NFF5 587 aa19.8■□□□□ 0.76
SPIDR-227ENST00000541342 FEZ1Q99689 392 aa19.8■□□□□ 0.76
SPIDR-227ENST00000541342 DCP1AQ9NPI6 582 aaPredicted RBP19.8■□□□□ 0.76
SPIDR-227ENST00000541342 IL1R1P14778 569 aa19.8■□□□□ 0.76
SPIDR-227ENST00000541342 ADALQ6DHV7 355 aa19.8■□□□□ 0.76
SPIDR-227ENST00000541342 NFXL1Q6ZNB6 911 aa19.8■□□□□ 0.76
SPIDR-227ENST00000541342 CEP57L1Q8IYX8 460 aa19.8■□□□□ 0.76
SPIDR-227ENST00000541342 FAM217BQ9NTX9 383 aaPredicted RBP19.8■□□□□ 0.76
SPIDR-227ENST00000541342 CCAR2Q8N163 923 aaKnown RBP19.79■□□□□ 0.76
SPIDR-227ENST00000541342 GJB4Q9NTQ9 266 aa19.79■□□□□ 0.76
SPIDR-227ENST00000541342 CPLX1O14810 134 aa19.79■□□□□ 0.76
SPIDR-227ENST00000541342 GTPBP4Q9BZE4 634 aaKnown RBP19.79■□□□□ 0.76
SPIDR-227ENST00000541342 ORC3Q9UBD5 711 aaPredicted RBP19.79■□□□□ 0.76
SPIDR-227ENST00000541342 USP17L12C9JPN9 530 aa19.79■□□□□ 0.76
SPIDR-227ENST00000541342 USP17L21D6R901 530 aa19.79■□□□□ 0.76
SPIDR-227ENST00000541342 ZBTB43O43298 467 aa19.79■□□□□ 0.76
SPIDR-227ENST00000541342 DIXDC1Q155Q3 683 aa19.79■□□□□ 0.76
SPIDR-227ENST00000541342 OLFM4Q6UX06 510 aa19.79■□□□□ 0.76
SPIDR-227ENST00000541342 SP8Q8IXZ3 490 aa19.79■□□□□ 0.76
SPIDR-227ENST00000541342 CRNKL1Q9BZJ0 848 aaKnown RBP19.79■□□□□ 0.76
SPIDR-227ENST00000541342 KCND1Q9NSA2 647 aa19.79■□□□□ 0.76
SPIDR-227ENST00000541342 TRMT1Q9NXH9 659 aaKnown RBP19.79■□□□□ 0.76
SPIDR-227ENST00000541342 TMED8Q6PL24 325 aaPredicted RBP19.78■□□□□ 0.76
SPIDR-227ENST00000541342 ZNF215Q9UL58 517 aaPredicted RBP19.78■□□□□ 0.76
SPIDR-227ENST00000541342 A0A1W2PQ27 194 aa19.78■□□□□ 0.76
SPIDR-227ENST00000541342 A0A1W2PQ64 194 aa19.78■□□□□ 0.76
SPIDR-227ENST00000541342 A0A1W2PQD8 194 aa19.78■□□□□ 0.76
SPIDR-227ENST00000541342 ATP6V0A2Q9Y487 856 aa19.78■□□□□ 0.76
SPIDR-227ENST00000541342 PTPN14Q15678 1187 aa19.78■□□□□ 0.76
SPIDR-227ENST00000541342 NTRK3Q16288 839 aa19.78■□□□□ 0.76
SPIDR-227ENST00000541342 OSBPL5Q9H0X9 879 aaPredicted RBP19.78■□□□□ 0.76
SPIDR-227ENST00000541342 FGRP09769 529 aa19.77■□□□□ 0.76
SPIDR-227ENST00000541342 OGFRQ9NZT2 677 aa19.77■□□□□ 0.76
SPIDR-227ENST00000541342 SLC12A7Q9Y666 1083 aa19.77■□□□□ 0.76
SPIDR-227ENST00000541342 PARP3Q9Y6F1 533 aa19.77■□□□□ 0.76
SPIDR-227ENST00000541342 ATP8A2Q9NTI2 1148 aa19.77■□□□□ 0.75
SPIDR-227ENST00000541342 KIAA1468Q9P260 1216 aa19.77■□□□□ 0.75
SPIDR-227ENST00000541342 CDK5RAP2Q96SN8 1893 aa19.77■□□□□ 0.75
SPIDR-227ENST00000541342 KIF28PB7ZC32 967 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 C6orf229H3BNL8 230 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 PRDM1O75626 825 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 POLR3DP05423 398 aaPredicted RBP19.76■□□□□ 0.75
SPIDR-227ENST00000541342 WTAPQ15007 396 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 TMC4Q7Z404 712 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 DDX41Q9UJV9 622 aaKnown RBP19.76■□□□□ 0.75
SPIDR-227ENST00000541342 GOLGA8AA7E2F4 631 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 RANBP6O60518 1105 aaKnown RBP19.76■□□□□ 0.75
SPIDR-227ENST00000541342 CYP2D6P10635 497 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 NPR1P16066 1061 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 ESR2Q92731 530 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 PHKBQ93100 1093 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 CGNQ9P2M7 1197 aaKnown RBP19.76■□□□□ 0.75
SPIDR-227ENST00000541342 NID2Q14112 1375 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 DLEC1Q9Y238 1755 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 SEC23AQ15436 765 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 EZH2Q15910 746 aaKnown RBP19.76■□□□□ 0.75
SPIDR-227ENST00000541342 SDF4Q9BRK5 362 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 MTA3Q9BTC8 594 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 POLR3EQ9NVU0 708 aa19.76■□□□□ 0.75
SPIDR-227ENST00000541342 SH3RF3Q8TEJ3 882 aaPredicted RBP19.75■□□□□ 0.75
SPIDR-227ENST00000541342 C8orf76Q96K31 380 aa19.75■□□□□ 0.75
SPIDR-227ENST00000541342 AIFM3Q96NN9 605 aa19.75■□□□□ 0.75
SPIDR-227ENST00000541342 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.75■□□□□ 0.75
SPIDR-227ENST00000541342 MKRN1Q9UHC7 482 aaKnown RBP19.75■□□□□ 0.75
SPIDR-227ENST00000541342 V9GYY5 206 aaPredicted RBP19.75■□□□□ 0.75
SPIDR-227ENST00000541342 SART3Q15020 963 aaKnown RBP19.75■□□□□ 0.75
SPIDR-227ENST00000541342 E4F1Q66K89 784 aaPredicted RBP19.75■□□□□ 0.75
SPIDR-227ENST00000541342 ARMCX5Q6P1M9 558 aa19.75■□□□□ 0.75
SPIDR-227ENST00000541342 FBXO18Q8NFZ0 1043 aa19.75■□□□□ 0.75
SPIDR-227ENST00000541342 NCAPHQ15003 741 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 KMT5BQ4FZB7 885 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 KIF18AQ8NI77 898 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 BPIFA3Q9BQP9 254 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 XPO4Q9C0E2 1151 aaKnown RBP19.74■□□□□ 0.75
SPIDR-227ENST00000541342 NAT10Q9H0A0 1025 aaKnown RBP19.74■□□□□ 0.75
SPIDR-227ENST00000541342 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.74■□□□□ 0.75
SPIDR-227ENST00000541342 MROH7-TTC4A0A0A0MT08 1334 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 TNKSO95271 1327 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 IGSF3O75054 1194 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 PDE6BP35913 854 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 AXDND1Q5T1B0 1012 aaPredicted RBP19.74■□□□□ 0.75
SPIDR-227ENST00000541342 UBE2Q2LH0YL09 131 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 EN1Q05925 392 aaPredicted RBP19.74■□□□□ 0.75
SPIDR-227ENST00000541342 MYSM1Q5VVJ2 828 aa19.74■□□□□ 0.75
SPIDR-227ENST00000541342 CAMKK2Q96RR4 588 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms