RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 FKTNO75072 461 aa15.76■□□□□ 0.11
LTBR-208ENST00000541005 POLR3DP05423 398 aaPredicted RBP15.76■□□□□ 0.11
LTBR-208ENST00000541005 SHMT1P34896 483 aa15.76■□□□□ 0.11
LTBR-208ENST00000541005 ZMYM1Q5SVZ6 1142 aa15.76■□□□□ 0.11
LTBR-208ENST00000541005 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
LTBR-208ENST00000541005 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
LTBR-208ENST00000541005 FASTKD5Q7L8L6 764 aaKnown RBP15.76■□□□□ 0.11
LTBR-208ENST00000541005 PLEKHM2Q8IWE5 1019 aa15.76■□□□□ 0.11
LTBR-208ENST00000541005 ZNF280CQ8ND82 737 aa15.76■□□□□ 0.11
LTBR-208ENST00000541005 WDR18Q9BV38 432 aa15.76■□□□□ 0.11
LTBR-208ENST00000541005 ZFYVE28Q9HCC9 887 aa15.76■□□□□ 0.11
LTBR-208ENST00000541005 SLC4A4Q9Y6R1 1079 aa15.76■□□□□ 0.11
LTBR-208ENST00000541005 PARP14Q460N5 1801 aa15.75■□□□□ 0.11
LTBR-208ENST00000541005 MYH4Q9Y623 1939 aa15.75■□□□□ 0.11
LTBR-208ENST00000541005 GPAA1O43292 621 aa15.75■□□□□ 0.11
LTBR-208ENST00000541005 GNAT2P19087 354 aa15.75■□□□□ 0.11
LTBR-208ENST00000541005 JAG1P78504 1218 aa15.75■□□□□ 0.11
LTBR-208ENST00000541005 GPAT2Q6NUI2 795 aa15.75■□□□□ 0.11
LTBR-208ENST00000541005 CCDC84Q86UT8 332 aaPredicted RBP15.75■□□□□ 0.11
LTBR-208ENST00000541005 DDRGK1Q96HY6 314 aa15.75■□□□□ 0.11
LTBR-208ENST00000541005 AS3MTQ9HBK9 375 aa15.75■□□□□ 0.11
LTBR-208ENST00000541005 LAMA4Q16363 1823 aa15.75■□□□□ 0.11
LTBR-208ENST00000541005 ROBO3Q96MS0 1386 aa15.75■□□□□ 0.11
LTBR-208ENST00000541005 TRIM75PA6NK02 468 aa15.74■□□□□ 0.11
LTBR-208ENST00000541005 M0R2C6 588 aa15.74■□□□□ 0.11
LTBR-208ENST00000541005 PDHXO00330 501 aa15.74■□□□□ 0.11
LTBR-208ENST00000541005 TLR2O60603 784 aa15.74■□□□□ 0.11
LTBR-208ENST00000541005 GDF11O95390 407 aa15.74■□□□□ 0.11
LTBR-208ENST00000541005 CYP2D6P10635 497 aa15.74■□□□□ 0.11
LTBR-208ENST00000541005 EVX2Q03828 476 aa15.74■□□□□ 0.11
LTBR-208ENST00000541005 SHROOM1Q2M3G4 852 aaPredicted RBP15.74■□□□□ 0.11
LTBR-208ENST00000541005 SH3D19Q5HYK7 790 aa15.74■□□□□ 0.11
LTBR-208ENST00000541005 C12orf60Q5U649 245 aa15.74■□□□□ 0.11
LTBR-208ENST00000541005 CTU1Q7Z7A3 348 aaKnown RBP15.74■□□□□ 0.11
LTBR-208ENST00000541005 PROCA1Q8NCQ7 364 aaPredicted RBP15.74■□□□□ 0.11
LTBR-208ENST00000541005 ARPP21Q9UBL0 812 aaPredicted RBP15.74■□□□□ 0.11
LTBR-208ENST00000541005 SWAP70Q9UH65 585 aa15.74■□□□□ 0.11
LTBR-208ENST00000541005 GSG1L2A8MUP6 293 aa15.73■□□□□ 0.11
LTBR-208ENST00000541005 SPP2Q13103 211 aa15.73■□□□□ 0.11
LTBR-208ENST00000541005 CERKLQ49MI3 558 aaPredicted RBP15.73■□□□□ 0.11
LTBR-208ENST00000541005 SBK1Q52WX2 424 aa15.73■□□□□ 0.11
LTBR-208ENST00000541005 IFFO2Q5TF58 517 aa15.73■□□□□ 0.11
LTBR-208ENST00000541005 AMOTL1Q8IY63 956 aa15.73■□□□□ 0.11
LTBR-208ENST00000541005 PARK7Q99497 189 aaKnown RBP15.73■□□□□ 0.11
LTBR-208ENST00000541005 MCOLN1Q9GZU1 580 aa15.73■□□□□ 0.11
LTBR-208ENST00000541005 AGTPBP1Q9UPW5 1226 aa15.73■□□□□ 0.11
LTBR-208ENST00000541005 USP17L12C9JPN9 530 aa15.72■□□□□ 0.11
LTBR-208ENST00000541005 USP17L21D6R901 530 aa15.72■□□□□ 0.11
LTBR-208ENST00000541005 GH2P01242 217 aa15.72■□□□□ 0.11
LTBR-208ENST00000541005 BACE1P56817 501 aa15.72■□□□□ 0.11
LTBR-208ENST00000541005 DGKZQ13574 1117 aa15.72■□□□□ 0.11
LTBR-208ENST00000541005 CTR9Q6PD62 1173 aa15.72■□□□□ 0.11
LTBR-208ENST00000541005 C16orf86Q6ZW13 317 aa15.72■□□□□ 0.11
LTBR-208ENST00000541005 ERO1AQ96HE7 468 aa15.72■□□□□ 0.11
LTBR-208ENST00000541005 EPB41L4AQ9HCS5 686 aaPredicted RBP15.72■□□□□ 0.11
LTBR-208ENST00000541005 RLFQ13129 1914 aa15.72■□□□□ 0.11
LTBR-208ENST00000541005 C19orf81C9J6K1 198 aa15.71■□□□□ 0.11
LTBR-208ENST00000541005 HMGCS2P54868 508 aa15.71■□□□□ 0.11
LTBR-208ENST00000541005 SP3Q02447 781 aa15.71■□□□□ 0.11
LTBR-208ENST00000541005 MTMR2Q13614 643 aa15.71■□□□□ 0.11
LTBR-208ENST00000541005 PKN2Q16513 984 aaKnown RBP15.71■□□□□ 0.11
LTBR-208ENST00000541005 ABCB5Q2M3G0 1257 aa15.71■□□□□ 0.11
LTBR-208ENST00000541005 C17orf99Q6UX52 265 aa15.71■□□□□ 0.11
LTBR-208ENST00000541005 GADL1Q6ZQY3 521 aa15.71■□□□□ 0.11
LTBR-208ENST00000541005 SLC44A5Q8NCS7 719 aa15.71■□□□□ 0.11
LTBR-208ENST00000541005 CYP2D7A0A087X1C5 515 aa15.7■□□□□ 0.1
LTBR-208ENST00000541005 USP17L10C9JJH3 530 aa15.7■□□□□ 0.1
LTBR-208ENST00000541005 GUCY1A2P33402 732 aa15.7■□□□□ 0.1
LTBR-208ENST00000541005 TREML2Q5T2D2 321 aa15.7■□□□□ 0.1
LTBR-208ENST00000541005 DYNLL2Q96FJ2 89 aa15.7■□□□□ 0.1
LTBR-208ENST00000541005 ABHD8Q96I13 439 aa15.7■□□□□ 0.1
LTBR-208ENST00000541005 SEC62Q99442 399 aaKnown RBP15.7■□□□□ 0.1
LTBR-208ENST00000541005 HELLSQ9NRZ9 838 aa15.7■□□□□ 0.1
LTBR-208ENST00000541005 RBBP6Q7Z6E9 1792 aaKnown RBP15.7■□□□□ 0.1
LTBR-208ENST00000541005 PATL2C9JE40 543 aaKnown RBP15.69■□□□□ 0.1
LTBR-208ENST00000541005 SMIM22K7EJ46 135 aa15.69■□□□□ 0.1
LTBR-208ENST00000541005 PDE4AP27815 886 aa15.69■□□□□ 0.1
LTBR-208ENST00000541005 CDK8P49336 464 aa15.69■□□□□ 0.1
LTBR-208ENST00000541005 C12orf42Q96LP6 360 aa15.69■□□□□ 0.1
LTBR-208ENST00000541005 CCDC17Q96LX7 622 aa15.69■□□□□ 0.1
LTBR-208ENST00000541005 CABP5Q9NP86 173 aa15.69■□□□□ 0.1
LTBR-208ENST00000541005 PNMA3Q9UL41 463 aa15.69■□□□□ 0.1
LTBR-208ENST00000541005 A0A0G2JMZ2 1700 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 KIAA0100Q14667 2235 aaKnown RBP15.68■□□□□ 0.1
LTBR-208ENST00000541005 FOXP2O15409 715 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 CYP2C8P10632 490 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 BCRP11274 1271 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 HOXA7P31268 230 aaPredicted RBP15.68■□□□□ 0.1
LTBR-208ENST00000541005 LACTBP83111 547 aaPredicted RBP15.68■□□□□ 0.1
LTBR-208ENST00000541005 CAP1Q01518 475 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 PABPC4Q13310 644 aaKnown RBP eCLIP15.68■□□□□ 0.1
LTBR-208ENST00000541005 TMEM179Q6ZVK1 233 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 OTOP1Q7RTM1 612 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 IFNL3Q8IZI9 196 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 CD99L2Q8TCZ2 262 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 NACAP1Q9BZK3 213 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 KIAA1683Q9H0B3 1180 aa15.68■□□□□ 0.1
LTBR-208ENST00000541005 A0A0D9SFI3 127 aa15.67■□□□□ 0.1
LTBR-208ENST00000541005 TRIM6-TRIM34B2RNG4 842 aa15.67■□□□□ 0.1
LTBR-208ENST00000541005 TDO2P48775 406 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms