RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 HLA-DOAP06340 250 aa17.61■□□□□ 0.41
MSRB3-209ENST00000540804 ASNSP08243 561 aa17.61■□□□□ 0.41
MSRB3-209ENST00000540804 IFIT2P09913 472 aaKnown RBP17.61■□□□□ 0.41
MSRB3-209ENST00000540804 BACE1P56817 501 aa17.61■□□□□ 0.41
MSRB3-209ENST00000540804 UNC93B1Q9H1C4 597 aa17.61■□□□□ 0.41
MSRB3-209ENST00000540804 PNMA3Q9UL41 463 aa17.61■□□□□ 0.41
MSRB3-209ENST00000540804 PDE6AP16499 860 aa17.6■□□□□ 0.41
MSRB3-209ENST00000540804 PLCD1P51178 756 aa17.6■□□□□ 0.41
MSRB3-209ENST00000540804 SLC9C2Q5TAH2 1124 aa17.6■□□□□ 0.41
MSRB3-209ENST00000540804 P2RX7Q99572 595 aaKnown RBP17.6■□□□□ 0.41
MSRB3-209ENST00000540804 TBC1D2Q9BYX2 928 aa17.6■□□□□ 0.41
MSRB3-209ENST00000540804 BOLA2Q9H3K6 86 aa17.6■□□□□ 0.41
MSRB3-209ENST00000540804 ATAD5Q96QE3 1844 aa17.6■□□□□ 0.41
MSRB3-209ENST00000540804 CDK5RAP2Q96SN8 1893 aa17.6■□□□□ 0.41
MSRB3-209ENST00000540804 LOC285556D6RIA3 1793 aa17.59■□□□□ 0.41
MSRB3-209ENST00000540804 ZNF532Q9HCE3 1301 aa17.59■□□□□ 0.41
MSRB3-209ENST00000540804 MAGEB6P1A0A0J9YX57 407 aa17.59■□□□□ 0.41
MSRB3-209ENST00000540804 SMARCA5O60264 1052 aaPredicted RBP17.59■□□□□ 0.41
MSRB3-209ENST00000540804 IGSF3O75054 1194 aa17.59■□□□□ 0.41
MSRB3-209ENST00000540804 HMMRO75330 724 aa17.59■□□□□ 0.41
MSRB3-209ENST00000540804 ZYXQ15942 572 aaKnown RBP17.59■□□□□ 0.41
MSRB3-209ENST00000540804 FAM110CQ1W6H9 321 aa17.59■□□□□ 0.41
MSRB3-209ENST00000540804 RNF208Q9H0X6 261 aa17.59■□□□□ 0.41
MSRB3-209ENST00000540804 EMILIN3Q9NT22 766 aa17.59■□□□□ 0.41
MSRB3-209ENST00000540804 TMOD4Q9NZQ9 345 aa17.59■□□□□ 0.41
MSRB3-209ENST00000540804 TCRBV5S4A2TA0A5A2 114 aa17.58■□□□□ 0.4
MSRB3-209ENST00000540804 USP17L10C9JJH3 530 aa17.58■□□□□ 0.4
MSRB3-209ENST00000540804 INHAP05111 366 aa17.58■□□□□ 0.4
MSRB3-209ENST00000540804 TATDN1Q6P1N9 297 aa17.58■□□□□ 0.4
MSRB3-209ENST00000540804 POTEEQ6S8J3 1075 aa17.58■□□□□ 0.4
MSRB3-209ENST00000540804 LCORLQ8N3X6 602 aa17.58■□□□□ 0.4
MSRB3-209ENST00000540804 SLAIN1Q8ND83 568 aa17.58■□□□□ 0.4
MSRB3-209ENST00000540804 SDR42E1Q8WUS8 393 aa17.58■□□□□ 0.4
MSRB3-209ENST00000540804 TXNRD2Q9NNW7 524 aa17.58■□□□□ 0.4
MSRB3-209ENST00000540804 FOCADQ5VW36 1801 aa17.58■□□□□ 0.4
MSRB3-209ENST00000540804 RAB11FIP3O75154 756 aa17.57■□□□□ 0.4
MSRB3-209ENST00000540804 CYP2D6P10635 497 aa17.57■□□□□ 0.4
MSRB3-209ENST00000540804 UBXN2AP68543 259 aa17.57■□□□□ 0.4
MSRB3-209ENST00000540804 IRX3P78415 501 aaPredicted RBP17.57■□□□□ 0.4
MSRB3-209ENST00000540804 PABPC4Q13310 644 aaKnown RBP eCLIP17.57■□□□□ 0.4
MSRB3-209ENST00000540804 TTF1Q15361 905 aaPredicted RBP17.57■□□□□ 0.4
MSRB3-209ENST00000540804 ARMT1Q9H993 441 aa17.57■□□□□ 0.4
MSRB3-209ENST00000540804 SERPINB13Q9UIV8 391 aa17.57■□□□□ 0.4
MSRB3-209ENST00000540804 PDE4DIPQ5VU43 2346 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 SMIM22K7EJ46 135 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 PRKAB2O43741 272 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 GJB1P08034 283 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 SHMT1P34896 483 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 GJA8P48165 433 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 GCLCP48506 637 aaPredicted RBP17.56■□□□□ 0.4
MSRB3-209ENST00000540804 TRIM32Q13049 653 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 RAB3GAP1Q15042 981 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 ACER1Q8TDN7 264 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.56■□□□□ 0.4
MSRB3-209ENST00000540804 COA7Q96BR5 231 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 EHD4Q9H223 541 aa17.56■□□□□ 0.4
MSRB3-209ENST00000540804 MGAMO43451 1857 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 C19orf81C9J6K1 198 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 POLR3DP05423 398 aaPredicted RBP17.55■□□□□ 0.4
MSRB3-209ENST00000540804 HOXA7P31268 230 aaPredicted RBP17.55■□□□□ 0.4
MSRB3-209ENST00000540804 GUCY1A2P33402 732 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 HERVK_113P62684 666 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 IRF5Q13568 498 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 Q3C1V9 767 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 CERKLQ49MI3 558 aaPredicted RBP17.55■□□□□ 0.4
MSRB3-209ENST00000540804 TTC6Q86TZ1 520 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 U2AF1L4Q8WU68 220 aaKnown RBP17.55■□□□□ 0.4
MSRB3-209ENST00000540804 PAG1Q9NWQ8 432 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 MCM9Q9NXL9 1143 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 RBPJLQ9UBG7 517 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 MORF4L1Q9UBU8 362 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 GJD2Q9UKL4 321 aa17.55■□□□□ 0.4
MSRB3-209ENST00000540804 PDE3AQ14432 1141 aa17.54■□□□□ 0.4
MSRB3-209ENST00000540804 ABCB5Q2M3G0 1257 aa17.54■□□□□ 0.4
MSRB3-209ENST00000540804 CERS3Q8IU89 383 aa17.54■□□□□ 0.4
MSRB3-209ENST00000540804 SLC44A5Q8NCS7 719 aa17.54■□□□□ 0.4
MSRB3-209ENST00000540804 PXYLP1Q8TE99 480 aa17.54■□□□□ 0.4
MSRB3-209ENST00000540804 PAGR1Q9BTK6 254 aa17.54■□□□□ 0.4
MSRB3-209ENST00000540804 CRNKL1Q9BZJ0 848 aaKnown RBP17.54■□□□□ 0.4
MSRB3-209ENST00000540804 GINM1Q9NU53 330 aa17.54■□□□□ 0.4
MSRB3-209ENST00000540804 KIAA0100Q14667 2235 aaKnown RBP17.53■□□□□ 0.4
MSRB3-209ENST00000540804 ATP5JP18859 108 aa17.53■□□□□ 0.4
MSRB3-209ENST00000540804 ADD2P35612 726 aa17.53■□□□□ 0.4
MSRB3-209ENST00000540804 GABPAQ06546 454 aa17.53■□□□□ 0.4
MSRB3-209ENST00000540804 SEPT2Q15019 361 aa17.53■□□□□ 0.4
MSRB3-209ENST00000540804 USP17L2Q6R6M4 530 aa17.53■□□□□ 0.4
MSRB3-209ENST00000540804 UBE2Q1Q7Z7E8 422 aa17.53■□□□□ 0.4
MSRB3-209ENST00000540804 DYNLL2Q96FJ2 89 aa17.53■□□□□ 0.4
MSRB3-209ENST00000540804 DEFB118Q96PH6 123 aa17.53■□□□□ 0.4
MSRB3-209ENST00000540804 FEZ1Q99689 392 aa17.53■□□□□ 0.4
MSRB3-209ENST00000540804 HAUS7Q99871 368 aa17.53■□□□□ 0.4
MSRB3-209ENST00000540804 DCP1AQ9NPI6 582 aaPredicted RBP17.53■□□□□ 0.4
MSRB3-209ENST00000540804 CYP2D7A0A087X1C5 515 aa17.52■□□□□ 0.4
MSRB3-209ENST00000540804 H0YGN5 161 aa17.52■□□□□ 0.4
MSRB3-209ENST00000540804 MBD4O95243 580 aa17.52■□□□□ 0.4
MSRB3-209ENST00000540804 SGPL1O95470 568 aa17.52■□□□□ 0.4
MSRB3-209ENST00000540804 CYP2B6P20813 491 aa17.52■□□□□ 0.4
MSRB3-209ENST00000540804 TSHZ3Q63HK5 1081 aa17.52■□□□□ 0.4
MSRB3-209ENST00000540804 GPRC5AQ8NFJ5 357 aa17.52■□□□□ 0.4
MSRB3-209ENST00000540804 LRRCC1Q9C099 1032 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms