RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CRACR2BQ8N4Y2 399 aaPredicted RBP14.05□□□□□ -0.16
NPC1-202ENST00000540608 SPATA20Q8TB22 786 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 STAG1Q8WVM7 1258 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 WDR24Q96S15 920 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 MTA3Q9BTC8 594 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 ARMT1Q9H993 441 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 CEP131Q9UPN4 1083 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 NUP98P52948 1817 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 CCDC196A0A1B0GTZ2 297 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 CCDC66A2RUB6 948 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 ACTN4O43707 911 aaKnown RBP14.05□□□□□ -0.16
NPC1-202ENST00000540608 ERCC5P28715 1186 aaPredicted RBP14.05□□□□□ -0.16
NPC1-202ENST00000540608 WTAPQ15007 396 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 SART3Q15020 963 aaKnown RBP14.05□□□□□ -0.16
NPC1-202ENST00000540608 DZIP3Q86Y13 1208 aaKnown RBP14.05□□□□□ -0.16
NPC1-202ENST00000540608 MED15Q96RN5 788 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 PCDHB6Q9Y5E3 794 aa14.05□□□□□ -0.16
NPC1-202ENST00000540608 DISP2A7MBM2 1401 aa14.04□□□□□ -0.16
NPC1-202ENST00000540608 CT47A1Q5JQC4 288 aaPredicted RBP14.04□□□□□ -0.16
NPC1-202ENST00000540608 GPR161Q8N6U8 529 aaKnown RBP14.04□□□□□ -0.16
NPC1-202ENST00000540608 RAI14Q9P0K7 980 aa14.04□□□□□ -0.16
NPC1-202ENST00000540608 MRFAP1Q9Y605 127 aa14.04□□□□□ -0.16
NPC1-202ENST00000540608 SLIT2O94813 1529 aa14.04□□□□□ -0.16
NPC1-202ENST00000540608 TIAM2Q8IVF5 1701 aa14.04□□□□□ -0.16
NPC1-202ENST00000540608 SNAP23O00161 211 aa14.04□□□□□ -0.16
NPC1-202ENST00000540608 GNAT2P19087 354 aa14.04□□□□□ -0.16
NPC1-202ENST00000540608 PLCD1P51178 756 aa14.04□□□□□ -0.16
NPC1-202ENST00000540608 RCAN1P53805 252 aa14.04□□□□□ -0.16
NPC1-202ENST00000540608 TRMT44Q8IYL2 757 aaKnown RBP14.04□□□□□ -0.16
NPC1-202ENST00000540608 KIFC2Q96AC6 838 aa14.04□□□□□ -0.16
NPC1-202ENST00000540608 SAMSN1Q9NSI8 373 aaKnown RBP14.04□□□□□ -0.16
NPC1-202ENST00000540608 AHDC1Q5TGY3 1603 aaPredicted RBP14.03□□□□□ -0.16
NPC1-202ENST00000540608 CHD4Q14839 1912 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 NR5A1Q13285 461 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 ZNF827Q17R98 1081 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 GRAMD1CQ8IYS0 662 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 NACAP1Q9BZK3 213 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 A0A1B0GTH6 734 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 ERICH2A1L162 156 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 SLC5A1P13866 664 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 RASGRF1Q13972 1273 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 RRP12Q5JTH9 1297 aaKnown RBP14.03□□□□□ -0.16
NPC1-202ENST00000540608 RSRC2Q7L4I2 434 aaKnown RBP14.03□□□□□ -0.16
NPC1-202ENST00000540608 FANCBQ8NB91 859 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 ZKSCAN3Q9BRR0 538 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 CSRNP2Q9H175 543 aa14.03□□□□□ -0.16
NPC1-202ENST00000540608 ERVV-1B6SEH8 477 aa14.02□□□□□ -0.16
NPC1-202ENST00000540608 PRKAB2O43741 272 aa14.02□□□□□ -0.16
NPC1-202ENST00000540608 PPP2R3AQ06190 1150 aa14.02□□□□□ -0.16
NPC1-202ENST00000540608 ZNF34Q8IZ26 560 aa14.02□□□□□ -0.16
NPC1-202ENST00000540608 PANX2Q96RD6 677 aa14.02□□□□□ -0.16
NPC1-202ENST00000540608 ROBO1Q9Y6N7 1651 aa14.02□□□□□ -0.16
NPC1-202ENST00000540608 PNPLA7Q6ZV29 1317 aa14.02□□□□□ -0.17
NPC1-202ENST00000540608 AKR1B15C9JRZ8 316 aaPredicted RBP14.02□□□□□ -0.17
NPC1-202ENST00000540608 CYP2C19P33261 490 aa14.02□□□□□ -0.17
NPC1-202ENST00000540608 TDO2P48775 406 aa14.02□□□□□ -0.17
NPC1-202ENST00000540608 CCDC82Q8N4S0 544 aa14.02□□□□□ -0.17
NPC1-202ENST00000540608 UBXN6Q9BZV1 441 aa14.02□□□□□ -0.17
NPC1-202ENST00000540608 CABP5Q9NP86 173 aa14.02□□□□□ -0.17
NPC1-202ENST00000540608 SLC4A4Q9Y6R1 1079 aa14.02□□□□□ -0.17
NPC1-202ENST00000540608 ARAP2Q8WZ64 1704 aa14.02□□□□□ -0.17
NPC1-202ENST00000540608 IL6STP40189 918 aaPredicted RBP14.01□□□□□ -0.17
NPC1-202ENST00000540608 USP49Q70CQ1 688 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 CMTR1Q8N1G2 835 aaKnown RBP14.01□□□□□ -0.17
NPC1-202ENST00000540608 OXER1Q8TDS5 423 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 RABGGTAQ92696 567 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 CCDC34Q96HJ3 373 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 SEC31BQ9NQW1 1179 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 TOMM22Q9NS69 142 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 AATFQ9NY61 560 aaKnown RBP eCLIP14.01□□□□□ -0.17
NPC1-202ENST00000540608 LRP5O75197 1615 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 DOCK2Q92608 1830 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 SEC31AO94979 1220 aaKnown RBP14.01□□□□□ -0.17
NPC1-202ENST00000540608 SPATA1Q5VX52 437 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 CC2D1AQ6P1N0 951 aaPredicted RBP14.01□□□□□ -0.17
NPC1-202ENST00000540608 ZNF654Q8IZM8 581 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 LCORLQ8N3X6 602 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 AK7Q96M32 723 aa14.01□□□□□ -0.17
NPC1-202ENST00000540608 RNF41Q9H4P4 317 aaPredicted RBP14.01□□□□□ -0.17
NPC1-202ENST00000540608 CCDC175P0C221 793 aa14□□□□□ -0.17
NPC1-202ENST00000540608 PPP2R5BQ15173 497 aa14□□□□□ -0.17
NPC1-202ENST00000540608 SUSD4Q5VX71 490 aa14□□□□□ -0.17
NPC1-202ENST00000540608 APTXQ7Z2E3 356 aaKnown RBP14□□□□□ -0.17
NPC1-202ENST00000540608 NAA15Q9BXJ9 866 aaKnown RBP14□□□□□ -0.17
NPC1-202ENST00000540608 EPC1Q9H2F5 836 aa14□□□□□ -0.17
NPC1-202ENST00000540608 EXOC5O00471 708 aa14□□□□□ -0.17
NPC1-202ENST00000540608 TBC1D8O95759 1140 aa14□□□□□ -0.17
NPC1-202ENST00000540608 ATP2B1P20020 1258 aa14□□□□□ -0.17
NPC1-202ENST00000540608 NUP133Q8WUM0 1156 aa14□□□□□ -0.17
NPC1-202ENST00000540608 DESI2Q9BSY9 194 aa14□□□□□ -0.17
NPC1-202ENST00000540608 RNF26Q9BY78 433 aaPredicted RBP14□□□□□ -0.17
NPC1-202ENST00000540608 TEX35Q5T0J7 233 aa14□□□□□ -0.17
NPC1-202ENST00000540608 SH3RF1Q7Z6J0 888 aa14□□□□□ -0.17
NPC1-202ENST00000540608 DHX58Q96C10 678 aa14□□□□□ -0.17
NPC1-202ENST00000540608 PARD6BQ9BYG5 372 aa14□□□□□ -0.17
NPC1-202ENST00000540608 MRPL44Q9H9J2 332 aaKnown RBP14□□□□□ -0.17
NPC1-202ENST00000540608 ZKSCAN7Q9P0L1 754 aaPredicted RBP14□□□□□ -0.17
NPC1-202ENST00000540608 TRIM75PA6NK02 468 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 TEX33O43247 280 aa13.99□□□□□ -0.17
NPC1-202ENST00000540608 SASH3O75995 380 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms